| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,815,858 | Δ82 bp | [rph]–[rph] | [rph], [rph] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3815858 | 3815939 | 82 | 46 [0] | [0] 45 | [rph]–[rph] | [rph], [rph] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3815857 | 0 (0.000) | 42 (0.860) | 34/264 | 0.4 | 100% | pseudogene (24/48 nt) | rph | ribonuclease PH (defective),enzyme, Degradation of RNA, RNase PH |
| ? | NC_000913 | 3815940 = | 0 (0.000) | pseudogene (609/669 nt) | rph | ribonuclease PH (defective),enzyme, Degradation of RNA, RNase PH | |||||
AAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCT > NC_000913/3815802‑3816081 | ctgcttgctaagcgcaaattcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttacaaatcagtttgccagcgccgccttctgcCGTcc > 2:834247‑M2/139‑143 (MQ=255) tgcttgctaatcgcaaattcaataaacttgcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTccc < 2:146940‑M2/6‑1 (MQ=255) aaactcactaaactcgcgctgatatgcattcatgccgtcgctcctcatcttacttttctacatacaatacacaggccactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatga < 1:688767‑M2/20‑1 (MQ=255) attcaataaactggcgctgatatggtttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAatgatg < 1:720357‑M2/22‑1 (MQ=255) cagtagacgggcgcggatagggttgcgtgccttcgctcgtcatcttgcttttcaacggacaaaaaaaaggcgactcatcagtcgcgttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcgc < 1:91570‑M2/25‑1 (MQ=255) caataaactggcgctgatatggtttcatccctgcgctcctcatcacacaagtctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATgcgc < 2:514622‑M2/25‑1 (MQ=255) aataaactggcgctgatatggtttcatgccttcgctcctcctcttacttttctacagacaaaaacaacgcgcctcctcactcgccttcaaaatccgtttgccagcgcccccttctgcCGTGCCCTGCACTTCAATCAT‑CGccc > 2:862044‑M2/118‑143 (MQ=255) gagctgatatggtttcatgccttcgctccgcaactcacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCgg < 2:350568‑M2/35‑1 (MQ=255) gatgctagggtttcctgcctgcgcacctcatcttacttttctacagacaaaaaaaaggcgacgcatcagtcgccttaaaaatcagttggccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGtc < 2:292284‑M2/37‑1 (MQ=255) ttcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGtt < 2:75178‑M2/48‑1 (MQ=255) gtcctgccctcgcgcctcatcttacttttctacagacaaacaaaaggcgactcctcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGtt < 1:20838‑M2/48‑1 (MQ=255) tcatgccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTc < 2:601800‑M2/49‑1 (MQ=255) ccttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGACATAACTACGTTCATGTc > 2:227736‑M2/90‑143 (MQ=255) ttcgctcctcatcttgcttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCCATCAAGCCCCCCTCTCCAGTCCTGACTACCATCATgtccc > 1:768816‑M2/88‑141 (MQ=255) ttcgctcctcatcttacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTCCATGTCgg > 2:766831‑M2/88‑143 (MQ=255) ctttcttttctactaacaaaaaaaagtctactcttcagtcgccttaaagatcagtttgccagcgccgcctgctgcCGTCCCCTGCACGCCAATGATGCGCCCGTCTTCGGGCATCACTACGTTCATGTCGGTCTCTGCGGCag < 2:266558‑M2/68‑1 (MQ=255) tacttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATATCGGTCTCTGCGGCagag > 1:342397‑M2/74‑143 (MQ=255) ttttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttcgggCGACCCCTGCACTTCAATGCTGCGCACGTCTTCGGTCATCAATACGCTCATGACGGTCTCTGAGGCAGAGTCt > 1:444564‑M2/71‑143 (MQ=255) tttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGAACTCCGCCGCATAGTCtt > 2:120837‑M2/70‑143 (MQ=255) ttctacagacaaaaaaaaggcgactcatcagtcgccttagaaatcagtttgccagcgccgccttctgcAGTCCCCTGCACTTCAATGATGCGCCCGGCTTCGGTCCTCACCACGTTCATGTCGGTATCTGCGTGAGAGTCTTc > 2:145224‑M2/69‑143 (MQ=255) ttctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTc > 2:805541‑M2/69‑143 (MQ=255) tctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTCCa > 1:262187‑M2/68‑143 (MQ=255) ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCaa < 2:333549‑M2/77‑1 (MQ=255) ctacagacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTCCGGCAGAGTCTTCaa < 1:771611‑M2/77‑1 (MQ=255) agacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCCCTACGTTCATGTCGGTCTCTGCGGCAGAGCCTTCAACGTa > 1:204618‑M2/63‑143 (MQ=255) agacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTa > 2:166536‑M2/63‑143 (MQ=255) gacaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGCCGGTCTCTGCGGCAGAGCCTTCAAcgtct > 1:445612‑M2/62‑141 (MQ=255) acaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGCCTTCAACGTAtt > 2:862234‑M2/61‑143 (MQ=255) acaaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGACCAGGTCGGCCTCTGCGGCAGAGTCTTCAACGTAtt > 2:859553‑M2/61‑143 (MQ=255) aaaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTAAAGAGCGGTCTCTGCGGCAGAGCCTTCACCGCATccc > 1:641605‑M2/59‑143 (MQ=255) aaaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCa < 2:518752‑M2/86‑1 (MQ=255) aaaaaaaggcgactcatcagtagccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCCTCGGTCATCACTACGCTCATGTCGGTCTCTGCGGCAGAGTATACAACGTATTCCa > 1:563000‑M2/58‑143 (MQ=255) aaaaaaggcgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGCGCGTTCAACGTGTGCCAg > 2:352799‑M2/57‑143 (MQ=255) ggcgactgatgagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGGCTCTGCGGCAGAGCATTCCACGTCTTCCAGAGCGCa > 2:93944‑M2/51‑143 (MQ=255) cgactcatcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGCGTCTTCACCGTATTCCATATCGCaaa > 1:727206‑M2/49‑143 (MQ=255) atcagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATCCCAGACCGCAAACcgccc > 1:608181‑M2/43‑141 (MQ=255) cagtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCg < 2:138586‑M2/103‑1 (MQ=255) cagtcgccttaaaaaccagtttgccagcgccgccttccgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGACGAGTCTTCAATGTATTCCAGATCGCAAACCGCTTCg < 2:473032‑M2/103‑1 (MQ=255) gtcgccttaaaaatcagtttgccagcgccgccttctgcCGTCCCATGCACTTCAATGATGCGCCCGTCTTCCGTCATCACTCCGTTCATGCCGGTCTCTGCGGCAGAGTCTGCAACGTATTCCAGAACGCAAACCGCTTCGcc > 1:31299‑M2/39‑143 (MQ=255) aatcagttggccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCGCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTc < 2:9201‑M2/116‑1 (MQ=255) agtttgccagcgccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGAc < 1:341148‑M2/120‑1 (MQ=255) ccgccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGGCAGAAACTGCGGc > 2:873635‑M2/12‑143 (MQ=255) gccttctgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTa < 1:166536‑M2/134‑1 (MQ=255) tgcCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATcc < 2:400303‑M2/140‑1 (MQ=255) cCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCt < 2:60087‑M2/142‑1 (MQ=255) | AAAAAAGGCGACTCATCAGTCGCCTTAAAAATCAGTTTGCCAGCGCCGCCTTCTGCGTCGCTACAATGGATTCGATTCCCCTCGGGCCAGAGCCAACAAGATGAGTAGCTCTTCATGGGTGAACGGCTCGCCTTCTGCCGTCCCCTGCACTTCAATGATGCGCCCGTCTTCGGTCATCACTACGTTCATGTCGGTCTCTGCGGCAGAGTCTTCAACGTATTCCAGATCGCAAACCGCTTCGCCGTTCACAATTCCGACAGAAACTGCGGCTACCATCCCT > NC_000913/3815802‑3816081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |