| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 1 (0.020) | 47 (0.890) | 39/284 | 0.3 | 97.9% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCC > NC_000913/4001508‑4001782 | gtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacggttctttgaagacgacgacggcctgcctct > 2:439767‑M2/142‑143 (MQ=255) atggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc < 2:100500‑M2/4‑1 (MQ=255) ggattgatcttggcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCctt < 2:274519‑M2/6‑1 (MQ=255) attgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttct < 1:871038‑M2/8‑1 (MQ=255) cgatctggtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtgtctttgaagacgacgacggcctgcatCTCcttcttc < 1:295614‑M2/10‑1 (MQ=255) gTCGAAGCGGAAGACGAGGCGCGTCTGCGCGGTCCGTCTGAAGTTGACTGGGGCCTGGCACTACGCCCGGACCTGGCAGACCTGGAAGCATCGGCACGTTTCTTTGAAGCCGACATCGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTg < 1:324328/143‑1 (MQ=255) atcttgtcgaaccggacgactacgagcgactgcgcgcacaatctgaccttggtcagagcctggcaacccgcccggtactgcaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttctt < 2:126599‑M2/12‑1 (MQ=255) atcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcctCTCcttcttctt > 1:375489‑M2/132‑143 (MQ=255) ttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttctt > 2:845575‑M2/129‑143 (MQ=255) cggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc > 1:88710‑M2/120‑143 (MQ=255) cggaccacgacgagcgaccgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc < 2:100912‑M2/24‑1 (MQ=255) acgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGa < 2:90966‑M2/27‑1 (MQ=255) gacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaaggcatcgaagcatgggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGTAg > 2:395422‑M2/115‑143 (MQ=255) cgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagtcgtcgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCAc < 2:496371‑M2/34‑1 (MQ=255) gcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacggttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCcggtaccgc > 2:504686‑M2/99‑139 (MQ=255) cgtacaatccgaacttggccacagcctggcaacccgcccggaaccggaagacatcgacgcatcggcacgttgctctgaagactacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTcc < 2:795749‑M2/46‑1 (MQ=255) actctgaacctcgccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacgtcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgt < 1:724880‑M2/51‑1 (MQ=255) cgcggaacgtgggcagagcctggcaacccttccggaactggaagacatcgaagcatcggcacggttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCCCtgtg < 1:663112‑M2/52‑1 (MQ=255) atcggaactctgccagagcctggcaacccgcccggaactggaagccatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg < 2:541962‑M2/52‑1 (MQ=255) gtgagcttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGc < 1:607012‑M2/54‑1 (MQ=255) tgaacttggcccgagcctggcaaggtgtatgatagttgaaaacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACGCCACTGTGGCa > 1:653684‑M2/89‑143 (MQ=255) tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCa > 2:677794‑M2/89‑143 (MQ=255) ttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacggtgctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTAc > 2:637322‑M2/84‑143 (MQ=255) gagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcacCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCcgc > 1:743438‑M2/77‑142 (MQ=255) gcccggaactggaagacatcgcagcatcggcacgtttctttgacgatgacgaggttcttcatCTTCTTCTTCTTCTTTGAAGAGGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt < 2:663842‑M2/81‑1 (MQ=255) gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtg > 2:874556‑M2/52‑143 (MQ=255) aagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCGGTGATGGTCGTCTGTTTACTCtgcgtgg > 2:842248‑M2/51‑142 (MQ=255) agacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgag > 2:431710‑M2/50‑143 (MQ=255) agacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgag > 1:467181‑M2/50‑143 (MQ=255) atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgcgcgtg > 1:623549‑M2/46‑143 (MQ=255) atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgtg < 2:600246‑M2/98‑1 (MQ=255) atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTGACTCTgcgtgagcgtg > 2:26508‑M2/46‑143 (MQ=255) atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACGCCACCGTGGCATTTACCATCCGTGATggtcgtctgtttactacgagtccgcggg > 1:97931‑M2/46‑130 (MQ=255) cgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCCTCTGCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGGGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 2:45346‑M2/100‑1 (MQ=255) cggcacgttgctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGc < 2:54799‑M2/108‑1 (MQ=255) gcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCtt > 2:435080‑M2/34‑143 (MQ=255) cacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGCTCACGCCGGTCACTCCACTGTGGCATTTACCATCCGTGATGCCCGTCTGTTTACTCCGCGTGACCGTCACCCGCCCGCttt > 1:417155‑M2/33‑143 (MQ=255) cgtttctttgaagactacgccggtctgcgtCGCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAAGTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTc < 1:170814‑M2/113‑1 (MQ=255) cgtttctgttaagtcgctgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTc < 1:867386‑M2/113‑1 (MQ=255) cttctttgatgacgacgactgtctgcatCTTCTTCTTCTTCTTTGAGGTTGCGGAAGATCACGTCGGTAACTTCACTGTGTCATTTGCCATCCGTGGTGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGt < 1:695443‑M2/115‑1 (MQ=255) tctttggagacgacgacggcctgcctCGCCTTGTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt < 2:153374‑M2/117‑1 (MQ=255) tcgttgaggacggcggctgcctgcatCCCCTTCTTCTTCTTTGAATATGCGGAAGATCACGCCGGTAACTACACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt < 1:696363‑M2/117‑1 (MQ=255) ttgaagacgacgacggcctgcctCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTa < 1:287557‑M2/120‑1 (MQ=255) aagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCg < 2:323781‑M2/123‑1 (MQ=255) gcgacggcggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAt < 1:526938‑M2/126‑1 (MQ=255) gacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACGATAGGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATAGTATGc > 2:783410‑M2/16‑143 (MQ=255) acggcctgcatCTCCTTCGTCTTCGTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGc < 2:375489‑M2/132‑1 (MQ=255) ggcctgcatCGCCTCCCTCTTCGGTGGAGATGCGGAAGATCACGCCGGTAACTCCGCTGTGGCATGGACCATCCGTGATGGTCGTCTGTTTTCTCTGCGTGAGCGTTAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGccc < 2:175300‑M2/134‑1 (MQ=255) | GATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCC > NC_000913/4001508‑4001782 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |