mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.32.0 revision 6ff6de7d1b87
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3955667 = | 282 (1.720) | 5 (0.030) | 4/486 | NT | 1.8% | coding (338/1545 nt) | ilvA | l‑threonine dehydratase, biosynthetic, also known as threonine deaminase |
| ? | NC_000913 | 3955896 = | 266 (1.680) | coding (567/1545 nt) | ilvA | l‑threonine dehydratase, biosynthetic, also known as threonine deaminase | |||||
| * | ? | NC_000913 | = 3135411 | 202 (1.230) | 3 (0.020) | 3/484 | NT | 1.5% | coding (959/1500 nt) | pitB | phosphate transporter |
| ? | NC_000913 | = 3135484 | 187 (1.180) | coding (886/1500 nt) | pitB | phosphate transporter | |||||
| * | ? | NC_000913 | 2496401 = | 163 (0.990) | 3 (0.020) | 3/478 | NT | 2.2% | coding (759/921 nt) | lpxP | palmitoleoyl‑acyl carrier protein (ACP)‑dependent acyltransferase |
| ? | NC_000913 | 2496809 = | 111 (0.710) | intergenic (+246/‑110) | lpxP/ypdK | palmitoleoyl‑acyl carrier protein (ACP)‑dependent acyltransferase/inner membrane protein | |||||
| * | ? | NC_000913 | 1643615 = | 185 (1.130) | 3 (0.020) | 3/482 | NT | 1.7% | coding (690/1050 nt) | ydfU | Qin prophage, uncharacterized protein |
| ? | NC_000913 | 1643805 = | 173 (1.100) | coding (500/1050 nt) | ydfU | Qin prophage, uncharacterized protein | |||||
| * | ? | NC_000913 | = 857575 | 124 (0.760) | 3 (0.020) | 3/478 | NT | 2.4% | intergenic (+20/+221) | ybiT/ybiU | ABC‑F family putative regulatory ATPase/DUF1479 family protein |
| ? | NC_000913 | = 857580 | 123 (0.790) | intergenic (+25/+216) | ybiT/ybiU | ABC‑F family putative regulatory ATPase/DUF1479 family protein | |||||
| * | ? | NC_000913 | = 226466 | 135 (0.820) | 3 (0.020) | 3/498 | NT | 2.2% | noncoding (708/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| ? | NC_000913 | 226471 = | 134 (0.820) | noncoding (713/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon | |||||