mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.32.0 revision 6ff6de7d1b87
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3923704 = | 170 (1.140) | 4 (0.030) | 4/474 | NT | 2.4% | intergenic (‑25/+39) | rsmG/mnmG | 16S rRNA m(7)G527 methyltransferase, SAM‑dependent, glucose‑inhibited cell‑division protein/5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34 |
| ? | NC_000913 | 3923732 = | 163 (1.150) | intergenic (‑53/+11) | rsmG/mnmG | 16S rRNA m(7)G527 methyltransferase, SAM‑dependent, glucose‑inhibited cell‑division protein/5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34 | |||||
| * | ? | NC_000913 | 2873903 = | 147 (0.990) | 3 (0.020) | 3/478 | NT | 2.1% | coding (88/606 nt) | cysC | adenosine 5'‑phosphosulfate kinase |
| ? | NC_000913 | 2873928 = | 134 (0.940) | coding (63/606 nt) | cysC | adenosine 5'‑phosphosulfate kinase | |||||
| * | ? | NC_000913 | = 2508692 | 149 (1.000) | 3 (0.020) | 3/478 | NT | 2.0% | coding (733/966 nt) | glk | glucokinase |
| ? | NC_000913 | = 2508730 | 150 (1.050) | coding (695/966 nt) | glk | glucokinase | |||||
| * | ? | NC_000913 | = 2472263 | 110 (0.740) | 3 (0.020) | 3/484 | NT | 2.3% | pseudogene (123/270 nt) | yfdM | CPS‑53 (KpLE1) prophage, putative methyltransferase,Phage or Prophage Related |
| ? | NC_000913 | = 4234871 | 146 (1.010) | coding (1115/1650 nt) | pgi | glucosephosphate isomerase | |||||
| * | ? | NC_000913 | 2320495 = | 162 (1.090) | 3 (0.020) | 3/484 | NT | 1.8% | coding (455/1827 nt) | atoS | sensory histidine kinase in two‑component regulatory system with AtoC |
| ? | NC_000913 | 2320590 = | 165 (1.140) | coding (550/1827 nt) | atoS | sensory histidine kinase in two‑component regulatory system with AtoC | |||||
| * | ? | NC_000913 | = 2310319 | 132 (0.890) | 3 (0.020) | 3/482 | NT | 2.2% | coding (85/1065 nt) | ada | fused DNA‑binding transcriptional dual regulator/O6‑methylguanine‑DNA methyltransferase |
| ? | NC_000913 | = 2310325 | 133 (0.920) | coding (79/1065 nt) | ada | fused DNA‑binding transcriptional dual regulator/O6‑methylguanine‑DNA methyltransferase | |||||
| * | ? | NC_000913 | = 702432 | 154 (1.030) | 3 (0.020) | 3/492 | NT | 1.9% | coding (320/1149 nt) | nagA | N‑acetylglucosamine‑6‑phosphate deacetylase |
| ? | NC_000913 | 702436 = | 151 (1.030) | coding (316/1149 nt) | nagA | N‑acetylglucosamine‑6‑phosphate deacetylase | |||||
| * | ? | NC_000913 | 691852 = | 149 (1.000) | 3 (0.020) | 3/486 | NT | 2.1% | intergenic (‑68/+22) | ybeX/ybeY | putative ion transport/ssRNA‑specific endoribonuclease, 16S rRNA 3' end maturation and quality control co‑endoribonuclease working with RNase R, rRNA transcription antitermination factor |
| ? | NC_000913 | 691872 = | 141 (0.970) | intergenic (‑88/+2) | ybeX/ybeY | putative ion transport/ssRNA‑specific endoribonuclease, 16S rRNA 3' end maturation and quality control co‑endoribonuclease working with RNase R, rRNA transcription antitermination factor | |||||
| * | ? | NC_000913 | 105361 = | 133 (0.890) | 3 (0.020) | 3/474 | NT | 2.3% | coding (57/1152 nt) | ftsZ | GTP‑binding tubulin‑like cell division protein |
| ? | NC_000913 | = 105357 | 133 (0.940) | coding (53/1152 nt) | ftsZ | GTP‑binding tubulin‑like cell division protein | |||||