mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.32.0 revision 6ff6de7d1b87
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4335641 = | 172 (1.120) | 4 (0.030) | 3/494 | NT | 2.5% | intergenic (‑50/+54) | eptA/adiC | lipid A phosphoethanolamine transferase/arginine:agmatine antiporter |
| ? | NC_000913 | 4335671 = | 150 (1.030) | intergenic (‑80/+24) | eptA/adiC | lipid A phosphoethanolamine transferase/arginine:agmatine antiporter | |||||
| * | ? | NC_000913 | 4225887 = | 197 (1.290) | 3 (0.020) | 3/512 | NT | 1.6% | coding (2061/3684 nt) | metH | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent |
| ? | NC_000913 | 4227006 = | 165 (1.100) | coding (3180/3684 nt) | metH | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent | |||||
| * | ? | NC_000913 | 3484542 = | 174 (1.140) | 3 (0.020) | 3/502 | NT | 1.8% | coding (55/870 nt) | prkB | putative phosphoribulokinase |
| ? | NC_000913 | = 3484538 | 167 (1.130) | coding (51/870 nt) | prkB | putative phosphoribulokinase | |||||
| * | ? | NC_000913 | 3156577 = | 150 (0.980) | 3 (0.020) | 3/500 | NT | 2.2% | intergenic (+61/‑44) | yqhD/dkgA | aldehyde reductase, NADPH‑dependent/2,5‑diketo‑D‑gluconate reductase A |
| ? | NC_000913 | 3156601 = | 126 (0.860) | intergenic (+85/‑20) | yqhD/dkgA | aldehyde reductase, NADPH‑dependent/2,5‑diketo‑D‑gluconate reductase A | |||||
| * | ? | NC_000913 | 895642 = | 181 (1.180) | 3 (0.020) | 3/508 | NT | 1.7% | coding (652/1134 nt) | potG | putrescine ABC transporter ATPase |
| ? | NC_000913 | 895887 = | 169 (1.130) | coding (897/1134 nt) | potG | putrescine ABC transporter ATPase | |||||
| * | ? | NC_000913 | = 373065 | 140 (0.910) | 3 (0.020) | 3/486 | NT | 2.3% | coding (145/951 nt) | mhpF | acetaldehyde‑CoA dehydrogenase II, NAD‑binding |
| ? | NC_000913 | = 373047 | 124 (0.870) | coding (127/951 nt) | mhpF | acetaldehyde‑CoA dehydrogenase II, NAD‑binding | |||||
| * | ? | NC_000913 | 273955 = | NA (NA) | 5 (0.030) | 5/522 | NT | 2.4% | intergenic (+1/+146) | ykfC/insH1 | CP4‑6 prophage, conserved protein,Phage or Prophage Related/IS5 transposase and trans‑activator |
| ? | NC_000913 | 419059 = | 207 (1.350) | coding (1171/1296 nt) | phoR | sensory histidine kinase in two‑component regulatory system with PhoB | |||||
| * | ? | NC_000913 | 31684 = | 158 (1.030) | 3 (0.020) | 3/512 | NT | 1.9% | coding (868/3222 nt) | carB | carbamoyl‑phosphate synthase large subunit |
| ? | NC_000913 | 31742 = | 162 (1.080) | coding (926/3222 nt) | carB | carbamoyl‑phosphate synthase large subunit | |||||