New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 845739	NA (NA)	3 (0.070)	3/282	6.4	8.2%	intergenic (‑259/+2)	ybiO/glnQ	mechanosensitive channel protein, intermediate conductance/glutamine transporter subunit
	?	NC_000913	1943717 =	34 (0.810)					coding (304/786 nt)	znuB	zinc ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTC  >  NC_000913/845599‑845881                                                                                                                                             |                                                                                                                                               aaGCAGGTTGCTGACAACGTGCGGGCTTTTGTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCttat                                                                                                                                              <  1:350889/143‑1 (MQ=255)      ggTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAaga                                                                                                                                         <  2:66371/143‑1 (MQ=255)                      ccggCTTTTTTGCGGGATTCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAAt                                                                                                                         <  2:667523/141‑1 (MQ=255)                          ctcttttGCCCGATGCGGCGTGAATGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCt                                                                                                                     <  2:337966/140‑1 (MQ=255)                          cTTTTTTGCCGGATGCGGCGTGAACGCCTTGTCCGCCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCt                                                                                                                     <  1:33503/143‑1 (MQ=255)                            tttttGCCGGATGCGGCGTGAACGCCTTATCCGTCCTATAAGTTCATGCAATTTTACTAAGTTGTCAGATATCCTGTAGTCCTGATCAGCGTAGCGCATCAGGCTATGTGTTTTATTACGAGACGTGCTCCAAAGATTcgttc                                                                                                                   >  2:38172/1‑139 (MQ=25)                            tttttGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGc                                                                                                                   <  2:454654/143‑1 (MQ=255)                               ttGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCGTATTAAGAGACGTGGTGCAAAAATTCCTGCAAg                                                                                                                >  1:672967/1‑143 (MQ=255)                                   cggtggcggcgTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCt                                                                                                            <  2:71274/138‑1 (MQ=255)                                    ggATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGCTATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTCTTAAGCGACGTGCTGAAAAAATACCTGAAAACGCTg                                                                                                           >  1:62686/1‑143 (MQ=37)                                         cggcgTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCACTGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTcg                                                                                                      >  2:278503/1‑143 (MQ=255)                                                aaCGCCTTATCCGTCCTACAAGTTCATGAAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGAAATGTGTATTATTAAGAGACGTGCTGCAAAAATTACTGAAAGAGCTGGCGCGGCGGGtt                                                                                               >  2:401628/1‑143 (MQ=38)                                                   gCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCtt                                                                                            >  2:338013/1‑143 (MQ=255)                                                   gCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCtt                                                                                            <  2:587136/143‑1 (MQ=255)                                                    ccTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAGGAGACGTGCTGCCACAAATCCTGAAAGCGCTGGGTCGGCGGGTTCttt                                                                                           >  2:239060/1‑142 (MQ=38)                                                     cTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGa                                                                                          <  1:142311/143‑1 (MQ=255)                                                              ccTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCt                                                                                 >  1:436963/1‑143 (MQ=255)                                                                 aCAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCACGGCGGGGTCTTGAGCAACACCTCCg                                                                              >  2:354580/1‑143 (MQ=255)                                                                    aGTTCATGCACTTTTAATAAGTGGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCCGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGAt                                                                           <  2:658016/143‑1 (MQ=255)                                                                     gTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGAtt                                                                          <  1:590511/143‑1 (MQ=255)                                                                        cATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGcc                                                                       >  1:666596/1‑143 (MQ=255)                                                                           gCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATc                                                                    >  2:302945/1‑143 (MQ=255)                                                                               ttttAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCCAGATCAACAGCAACCCCTGGCTCCGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTcc                                                                >  1:531926/1‑143 (MQ=37)                                                                                tgtaataaGTTGCGAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCg                                                               <  2:600129/141‑1 (MQ=255)                                                                                                       gTAGGCTTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTATGAGACGTGCTGCAAAACTTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAg                                        <  2:221821/143‑1 (MQ=255)                                                                                                           gCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCa                                    >  1:522468/1‑143 (MQ=255)                                                                                                               gATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGCCTGCCATCTCCCGCACTCCGGCCTTTGTCGCCAAAGacgagcac                                >  2:262878/1‑136 (MQ=255)                                                                                                                   aGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGaa                            >  1:672162/1‑143 (MQ=255)                                                                                                                     cGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGAGTGCCATCCTCCGCCATCCGGCCTTTGTCGATCCAGTTCAGCCGCGAAGc                          >  1:218286/1‑143 (MQ=255)                                                                                                                        aGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCGCGGCGGGTTCTTGATCAACACCTGCGGAGTGCCATCGTCCGCAATCCGGACGTTGCCGAGAAAGATCAGCAGCGCAGCTAc                       >  2:691256/1‑143 (MQ=255)                                                                                                                        aGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCACAACGGGTAACTGATCAATACCTGCGGACTGCCATCGTCCGCGATCCGGCGCTTGTCGGTCGAGATCAGCGGCTGAGCtgc                       >  2:257805/1‑141 (MQ=255)                                                                                                                               cAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCg                >  1:521279/1‑143 (MQ=255)                                                                                                                                 ggCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGc              >  1:652248/1‑143 (MQ=255)                                                                                                                                            ttattaAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGCTTGCCATCTTCCGCCATCCGGCCTTTGTCGATCAAGATCAGCCGCGCAGCTACCTCCTCGGCCAAACCgcctt   >  2:331385/1‑139 (MQ=255)                                                                                                                                            ttattaAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGAttt   >  1:507366/1‑143 (MQ=255)                                                                                                                                             tatgaAGAGACGTGCTGCAATAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTc  <  1:330774/143‑1 (MQ=255)                                                                                                                                             |                                                                                                                                               AAGCAGGTTGCTGACAACGTGCGGGCTTTTTTGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAGTTCATGCAATTTTAATAAGTTGCCAGATATCCTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTGTCTTATTAAGAGACGTGCTGCAAAAATTCCTGCAAGCGCTGGCTCGGCGGGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTC  >  NC_000913/845599‑845881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.