New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 845739NA (NA)3 (0.070) 3/282 6.4 8.2% intergenic (‑259/+2) ybiO/glnQ mechanosensitive channel protein, intermediate conductance/glutamine transporter subunit
?NC_000913 1943717 = 34 (0.810)coding (304/786 nt) znuB zinc ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCGTGGTGGCTATTTTGTTCTGGCAATGGCGCAATTTGCT  >  NC_000913/1943582‑1943859
                                                                                                                                       |                                                                                                                                              
gtCTATGCGGTGCTTGCCGTTGCGCTGCTGCTGGCGGGCGGGCTGGTATGGCTGGAGGAGCGGCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGAt                                                                                                                                         <  2:615866/142‑1 (MQ=255)
    aTGCGGTGATTGCCGTTACGCTGCTGTTATTTAGATGGCTTGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCATGTCGCGGGGCCGGGGGGGCGTGAGGCTGATGGCt                                                                                                                                     >  2:225313/1‑143 (MQ=255)
      gCGGTGATTGCCGTTACGGTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTaa                                                                                                                                   <  1:24066/143‑1 (MQ=255)
        ggTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGtgttggt                                                                                                                                 >  1:160667/1‑137 (MQ=255)
           gATTGCCGTTACGCTGCTGCTGGCGGGCGGTCCGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATAATGGCGCCCAGTGCCCTGTCACTGGGCCGGGAGGTAGTGAGCCTggcgcacaccatcc                                                                                                                              >  2:103325/1‑130 (MQ=255)
                       gctgctgctGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGCTGTCTAATGTTCGTGttgatttga                                                                                                                  >  1:465402/1‑143 (MQ=255)
                       gctgctgctGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTaa                                                                                                                                   >  2:266459/1‑126 (MQ=255)
                       gctgctgctGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTaa                                                                                                                                   <  1:266459/126‑1 (MQ=255)
                               tgGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTAc                                                                                                          <  1:571877/143‑1 (MQ=255)
                               tgGCGGGCGGTCTGGGATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTAc                                                                                                          <  1:461349/143‑1 (MQ=255)
                                 gcgggcggTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGCTGCTTTGATGGCTTACCt                                                                                                        >  1:161318/1‑143 (MQ=255)
                                        gTCTGGTGTGGCTGGAGATGCGTCCACGGCTGGCGGTCGGCACGTTATTAGGGATTAGGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGCTGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGt                                                                                                 <  2:637945/143‑1 (MQ=255)
                                        gTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGt                                                                                                 <  2:63670/143‑1 (MQ=255)
                                        gTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGt                                                                                                 <  1:456943/143‑1 (MQ=255)
                                         tCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTGGTAGGGGCTATGGCGCGCAGTGCCCTGTCGCTGGGCCCGGGGGTCGTGAGTGGGACGGCCAATATTCGCGGTGATTCGCTGGCTTAcgcggtaggtc                                                                                                >  2:207316/1‑133 (MQ=255)
                                           tGGTAGGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGAt                                                                                              <  1:181692/143‑1 (MQ=255)
                                                  gCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTgg                                                                                       >  2:196772/1‑143 (MQ=255)
                                                      gagaAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGt                                                                                   <  1:631111/143‑1 (MQ=255)
                                                        ggatcttCCACTGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGTGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGa                                                                                 <  2:92211/137‑1 (MQ=255)
                                                         aaGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCGGTCGCTGGGCCTGGTGGTGGTGAGTCGGATGTCTAAGATTCGCGATGGTTTGATGGCTTACAGGTTAGGGGAGTTGCTGGCAGTGAc                                                                                >  1:124532/1‑143 (MQ=255)
                                                           gCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGc                                                                              >  2:187252/1‑143 (MQ=255)
                                                             gTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCa                                                                            <  1:225313/143‑1 (MQ=255)
                                                                 acaGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGGCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCagaag                                                                        >  1:399093/1‑143 (MQ=255)
                                                                     cTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTAGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTAGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTTCTGGTAGTGTCGCAAGAAGatct                                                                    >  1:490754/1‑143 (MQ=255)
                                                                     cTGGCCATCGACCCGTTCTTAGGGATTATGGCGCACAGTGCCCCGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGctct                                                                    <  1:34215/143‑1 (MQ=255)
                                                                          gATCGACACGTTATTAGGGATTATGGCGCACAGTGCACTGGCGCTGGGCCTGGTGGTCGTGAGTCTGCTGTCTCATATTCGTGTTGACTCGCTGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGACAGACGgtctcgtct                                                               >  1:105097/1‑143 (MQ=255)
                                                                                cacGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGAGCCTGGTGGTGGTGAGTCTGATGTCTAATATTCGTGTTGCTTTGATGGCTTACCTGTTCGGTGATTTGATGGAAGTGACGCCAGAAGAGGTCATctctctag                                                         >  2:74570/1‑139 (MQ=255)
                                                                                                  ggCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCCTCg                                       >  2:409392/1‑143 (MQ=255)
                                                                                                     ggccggTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCgtgg                                    <  2:533198/138‑1 (MQ=255)
                                                                                                        caGGGCCCTGTGGCTGGGCATGGTGGTAGTGAGTCGGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCGtggtgg                                 <  2:213214/143‑1 (MQ=255)
                                                                                                                     cTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGCTCATCGTGGTGGCTATTTTGTTCTg                    <  2:718365/143‑1 (MQ=255)
                                                                                                                      tGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCGTGGTGGCTATTTTGTTCTgg                   >  1:521589/1‑143 (MQ=255)
                                                                                                                           cTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCGTGGTGGCTATTTTGTTCTGGCAATg              <  1:440271/143‑1 (MQ=255)
                                                                                                                             ggggggcggtaGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTATCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCGTGGTGGCTATTTTGTTCTGCCAATGgc            <  2:160667/133‑1 (MQ=255)
                                                                                                                                  tCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGAGCTCATCTCTATTGCGATTGGCGTGGTCATCGTGGTGGCTAGTTTGTTCTGGCAATGGCGCAAt       >  1:570643/1‑143 (MQ=255)
                                                                                                                                       aGTCTGATGTCTAATATTCGTGTTGATTGGATGGCGTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCGTGGTGGCTATTTTGTTCTGGCAATGGCGCAATTTGCt  <  1:257165/143‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                              
TTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCGTGGTGGCTATTTTGTTCTGGCAATGGCGCAATTTGCT  >  NC_000913/1943582‑1943859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.