Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,001,644 Δ5 bp coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4001644 4001648 5 20 [0] [0] 20 corA magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016430 (0.000)20 (0.720) 19/284 0.4 100% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001649 = 0 (0.000)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

ATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGC  >  NC_000913/4001505‑4001780
                                                                                                                                          |                                                                                                                                         
aTGGACTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc                                                                                                                                       <  1:47267‑M1/143‑5 (MQ=255)
            tGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGCAGACATCGAATCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttt                                                                                                                           <  1:224576‑M1/143‑17 (MQ=255)
                     ggACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttatgctttgaagatgcg                                                                                                                  >  2:278904‑M1/1‑118 (MQ=255)
                      gacgactgcGATCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgg                                                                                                                 <  2:24075‑M1/143‑27 (MQ=255)
                      gacgacgacGAGCGACTGCCCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACACCGACGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgg                                                                                                                 <  2:345038‑M1/143‑27 (MQ=255)
                                         gcgTACAATCTGACCTTGCCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactc                                                                                              <  1:300373‑M1/143‑46 (MQ=255)
                                            tACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccac                                                                                           >  2:231280‑M1/1‑95 (MQ=255)
                                                 tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtgg                                                                                      >  1:344451‑M1/1‑90 (MQ=255)
                                                                   cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGCAGACGACGACGGCCTGCCTttccttcttcttctttgaagatgcggcagatcacgccgacaacttcactgtggccttcaccatccgtgatg                                                                    >  1:64633‑M1/1‑72 (MQ=255)
                                                                       cAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcg                                                                <  1:119980‑M1/143‑76 (MQ=255)
                                                                                   acctgGAGGACGTGGAAGCATCGGCACTTTGCTTTGAAGAGGACGACGGCCTGCATctccttcttctgctttgaatatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactct                                                    <  2:329716‑M1/141‑88 (MQ=255)
                                                                                    aCTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgctggtcgtgtgtttactctg                                                   >  2:233785‑M1/1‑55 (MQ=255)
                                                                                                              gTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcg                         <  1:468393‑M1/143‑115 (MQ=255)
                                                                                                                 tCTTTGACGACGACGACGGCCTTCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct                      <  1:231135‑M1/143‑118 (MQ=255)
                                                                                                                      gacgacgacgacggcCTGCATctccttcttcgtcttggaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatc                 <  2:435568‑M1/140‑123 (MQ=255)
                                                                                                                            gacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgc           >  1:356620‑M1/1‑15 (MQ=255)
                                                                                                                                 cgGCCTGCATccccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcc      <  1:231280‑M1/143‑134 (MQ=255)
                                                                                                                                  ggCCTGCATctccttcttcttctttgatgatgcggaagttcacgccggtaactccactgtggcatttaccatccgtgatagtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgccc     <  2:365410‑M1/143‑135 (MQ=255)
                                                                                                                                  ggCCTGCATctccttcttcttctttgaagatgcggaagctcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcttgcgcgtgagctgcccgcttttcgtctgtatcgtattcgtgcac     >  1:425157‑M1/1‑9 (MQ=255)
                                                                                                                                     cTGCATctccttcttcttctttgaagatgcggaagttcacgccggtaacgccactgtggtatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgta  <  2:302326‑M1/143‑138 (MQ=255)
                                                                                                                                          |                                                                                                                                         
ATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGC  >  NC_000913/4001505‑4001780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: