Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,001,644 Δ5 bp coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4001644 4001648 5 20 [0] [0] 20 corA magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016430 (0.000)20 (0.720) 19/284 0.4 100% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001649 = 0 (0.000)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

TTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTA  >  NC_000913/4001510‑4001785
                                                                                                                                           |                                                                                                                                        
atggactgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc                                                                                                                                       <  1:47267‑M2/4‑1 (MQ=255)
            tgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggcagacatcgaatcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCttt                                                                                                                           <  1:224576‑M2/16‑1 (MQ=255)
                     ggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTATGCTTTGAAGATGCg                                                                                                                  >  2:278904‑M2/119‑143 (MQ=255)
                      gacgactgcgatcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCgg                                                                                                                 <  2:24075‑M2/26‑1 (MQ=255)
                      gacgacgacgagcgactgcccgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacaccgacgcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCgg                                                                                                                 <  2:345038‑M2/26‑1 (MQ=255)
                                         gcgtacaatctgaccttgcccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTc                                                                                              <  1:300373‑M2/45‑1 (MQ=255)
                                            tacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCAc                                                                                           >  2:231280‑M2/96‑143 (MQ=255)
                                                 tctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTgg                                                                                      >  1:344451‑M2/91‑143 (MQ=255)
                                                                   ctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgcagacgacgacggcctgcctTTCCTTCTTCTTCTTTGAAGATGCGGCAGATCACGCCGACAACTTCACTGTGGCCTTCACCATCCGTGATg                                                                    >  1:64633‑M2/73‑143 (MQ=255)
                                                                       caacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtcg                                                                <  1:119980‑M2/75‑1 (MQ=255)
                                                                                   acctggaggacgtggaagcatcggcactttgctttgaagaggacgacggcctgcatCTCCTTCTTCTGCTTTGAATATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTActct                                                    <  2:329716‑M2/87‑1 (MQ=255)
                                                                                    actggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGCTGGTCGTGTGTTTACTCTg                                                   >  2:233785‑M2/56‑143 (MQ=255)
                                                                                                              gtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCg                         <  1:468393‑M2/114‑1 (MQ=255)
                                                                                                                 tctttgacgacgacgacggccttcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt                      <  1:231135‑M2/117‑1 (MQ=255)
                                                                                                                      gacgacgacgacggcctgcatCTCCTTCTTCGTCTTGGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATc                 <  2:435568‑M2/122‑1 (MQ=255)
                                                                                                                            gacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGc           >  1:356620‑M2/16‑143 (MQ=255)
                                                                                                                                 cggcctgcatCCCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGcc      <  1:231280‑M2/133‑1 (MQ=255)
                                                                                                                                  ggcctgcatCTCCTTCTTCTTCTTTGATGATGCGGAAGTTCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATAGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGccc     <  2:365410‑M2/134‑1 (MQ=255)
                                                                                                                                  ggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGCTCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCTTGCGCGTGAGCTGCCCGCTTTTCGTCTGTATCGTATTCGtgcac     >  1:425157‑M2/10‑141 (MQ=255)
                                                                                                                                     ctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGTTCACGCCGGTAACGCCACTGTGGTATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTa  <  2:302326‑M2/137‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                        
TTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTA  >  NC_000913/4001510‑4001785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: