New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	618054 =	38 (0.940)	4 (0.110)	4/258	4.7	10.1%	intergenic (+16/‑200)	entF/fepE	enterobactin synthase multienzyme complex component, ATP‑dependent/regulator of length of O‑antigen component of lipopolysaccharide chains
	?	NC_000913	618087 =	37 (1.010)					intergenic (+49/‑167)	entF/fepE	enterobactin synthase multienzyme complex component, ATP‑dependent/regulator of length of O‑antigen component of lipopolysaccharide chains
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGCGCCTGGTCGCCGTGGATAGCGGAGCTGGATATCTATCGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAATTATCACCAAC  >  NC_000913/617913‑618194                                                                                                                                              |                                                                                                                                             cgcgCCTGGTCGCCGTGGATAGCGGAGCTGGATATCTATCGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATaa                                                                                                                                             <  2:649671/143‑1 (MQ=255)      cTGGTCGCCGTGGATAGCGGAGCTGGATATCTCTCGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGCCGTTTGAAGAAATTGGGCCGATTATTAACAAAACGCTAAACAAATAAATTAATATTATTTATAAACCCa                                                                                                                                        >  2:516037/1‑143 (MQ=255)         gTCGCCGTGGATAGCGGAGCTGGATATCTAGAGTCAGGCTGGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATaa                                                                                                                                     <  2:115538/143‑1 (MQ=255)             ccGTGGATAGCGGAGCTGGATATCTATCGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTTTTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTAc                                                                                                                                 >  2:453579/1‑143 (MQ=255)                          aGCTGGATTTCTATCGTCAGGATTGTGCGCATTTTTATTTTTTCTCTTCATGGTCGTTTGTAAAAATTTGGCCGATTATTCGCGCAACGCGAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTAt                                                                                                                    <  2:102837/143‑1 (MQ=255)                          aGCTGGATATCTATCGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAACATAATTAt                                                                                                                    >  1:442528/1‑143 (MQ=255)                                atttctatcGTCAGGCTTGTGCGCATGTGGATAGTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGATAAACAGGTTAATTATTATTATTTATAAACCCATAATTACAGAAAATAATTATGGGttt                                                                                                              <  1:716392/140‑1 (MQ=255)                                  atctatcGTCAGGATTGTGCGAATGTGGATATTATCTCTCCAGGGACGTTTGGAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAAGTACTATTATTTATAAACCCATACTTACAGAAAATAACTATGGGttcat                                                                                                            >  1:388740/1‑140 (MQ=255)                                     tatcGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAAGATTATTTATACACCCATAATTACAGAAAATAATTATGGGTTTTTTAt                                                                                                         >  1:660196/1‑143 (MQ=255)                                      atcGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTAtt                                                                                                        >  1:128625/1‑143 (MQ=255)                                      atagTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTAtt                                                                                                        <  2:664132/140‑1 (MQ=255)                                          tCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTAtttgtt                                                                                                    <  1:238502/143‑1 (MQ=255)                                          tCAGGATTGTGCGCATATGGATATTATACCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATCATTACAGAAAGACAATACGGCATTTATAtttgtt                                                                                                    >  1:716838/1‑143 (MQ=255)                                                          gtgGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGttttaa                                                                                    >  1:665322/1‑141 (MQ=255)                                                          gtgGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATAGGATTTTTATTTGTTTGATTTATAGGTTtga                                                                                    >  2:171272/1‑143 (MQ=255)                                                                attatCTCTGCAGGGACGTTTGAAAAAATTGGTCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAata                                                                              <  1:487013/143‑1 (MQ=255)                                                                     ctctcCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAATGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTtct                                                                         <  1:228944/143‑1 (MQ=255)                                                                     ctctcCAGAGACATTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTtct                                                                         <  1:453579/143‑1 (MQ=255)                                                                         ctatggACGTTTGAAAAAATTGGTCCGATTATTCGCGCAACGCTAAACAGTTAAATTAATATTATTTATAATCTCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTa                                                                     <  1:10275/139‑1 (MQ=255)                                                                            gggACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTCATATTATTTATAAACCCATAATTACAGAAAATAAATATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTAAAt                                                                  >  2:8674/1‑143 (MQ=255)                                                                             ggACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTAAGGGTATTTTATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTACATa                                                                 >  2:549680/1‑143 (MQ=255)                                                                                  tttGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTGCAGAAAATAATTATGGGATTTTTATTTGTTTTATTTTTTGGTTTGGTGAATATTTCTCTTAAATAGAGta                                                            >  2:90117/1‑142 (MQ=255)                                                                                  tttGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTAAATAGAGTg                                                            >  2:185108/1‑143 (MQ=255)                                                                                     gAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACCGAAAATAATTATGGGTTTTTTCTTTGTTTGCTTTATAGGTTTGATGAATATTTCTCATAAATAGAGTGAAt                                                         >  2:569681/1‑143 (MQ=255)                                                                                        aaaaTTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTAAATAGCGTGAATGtt                                                      >  1:192248/1‑143 (MQ=255)                                                                                        aaaaTTGATCAGAGTATTAACTCAACTCTAAACAGTTAAATTTATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTAAATAGAGTGAATGtt                                                      <  1:20188/143‑1 (MQ=255)                                                                                         aaaTTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAAGTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTAAATAGAGTGAATGTTg                                                     <  2:602010/143‑1 (MQ=255)                                                                                          aaTTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATGTATAGGTTTGATGAATATTTCTCTTAAATAGAGTGAATGTTGc                                                    <  2:733316/143‑1 (MQ=255)                                                                                           aTTCGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATTTTCCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTAAATAGAGTGAATGTTGCa                                                   <  2:202424/143‑1 (MQ=255)                                                                                               gttctagtattCGCGCAAATATAAATAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTAAATAGAGTGAATGTTGCATTCa                                               <  1:649999/136‑1 (MQ=255)                                                                                               gcacGATGAGTCGCGTAACGCTAAGCAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTAAATAGAGTGAATGTTGCATTCa                                               <  1:309847/140‑1 (MQ=255)                                                                                                     tgtttcactcAACACTAAACAGGTAAATTAATATTATTTATTATTTCATTATTTTATATAATTATTATGGGTTTTGTATTTGGTTGATTTATAGGTTTGATGAATATTTCTCTTAAATAGAGTGAATGTTGCATTCAGTggaa                                         <  2:238329/134‑1 (MQ=255)                                                                                                         tCGGGCAACGGTAAATAGGTAAATTAATATTATTTATAAACCCATAATGACAGAAAAGAATTATGGGTTTTTGATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTAAATAGAGTGAATGTTGCATTCAGTggaaggaa                                     <  2:595082/143‑1 (MQ=255)                                                                                                                 cGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTAAATAGAGTGAATTTTGCATTCAGTGGAAGAAATTTACaaa                             >  2:511304/1‑143 (MQ=255)                                                                                                                                   atatTATTTATACACCCATAATGACAGAAAAGAATTATGGGTTTTTTATTTGTGTGATTTATAGGTTTGATGAATATTTCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAAtt           <  2:73640/143‑1 (MQ=255)                                                                                                                                   atatTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAAtt           <  2:409159/143‑1 (MQ=255)                                                                                                                                            ataAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTTTAGGTTTGATGAGTATTTCTCGTAAATAGTGTGAATGTTGCATTCAGTGGAAGGATTTTAAAAACTTAAGCTTCGGATAATTATCACCGAc  >  2:596024/1‑143 (MQ=255)                                                                                                                                            ataAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAATTATCACCAAc  >  2:395479/1‑143 (MQ=255)                                                                                                                                              |                                                                                                                                             CGCGCCTGGTCGCCGTGGATAGCGGAGCTGGATATCTATCGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATTTCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAATTATCACCAAC  >  NC_000913/617913‑618194

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.