New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	618054 =	38 (0.940)	4 (0.110)	4/258	4.7	10.1%	intergenic (+16/‑200)	entF/fepE	enterobactin synthase multienzyme complex component, ATP‑dependent/regulator of length of O‑antigen component of lipopolysaccharide chains
	?	NC_000913	618087 =	37 (1.010)					intergenic (+49/‑167)	entF/fepE	enterobactin synthase multienzyme complex component, ATP‑dependent/regulator of length of O‑antigen component of lipopolysaccharide chains
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TATCGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAATTATCACCAACTGGTAAAGTGAGCGCCGTGGAGATTTCCCCCT  >  NC_000913/617949‑618226                                                                                                                                           |                                                                                                                                             tatcGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAAGATTATTTATACACCCATAATTACAGAAAATAATTATGGGTTTTTTAt                                                                                                                                          >  1:660196/1‑143 (MQ=255)  atcGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTAtt                                                                                                                                         >  1:128625/1‑143 (MQ=255)  atagTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTAtt                                                                                                                                         <  2:664132/140‑1 (MQ=255)      tCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTAtttgtt                                                                                                                                     <  1:238502/143‑1 (MQ=255)      tCAGGATTGTGCGCATATGGATATTATACCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATCATTACAGAAAGACAATACGGCATTTATAtttgtt                                                                                                                                     >  1:716838/1‑143 (MQ=255)                      gtgGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGttttaa                                                                                                                     >  1:665322/1‑141 (MQ=255)                      gtgGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATAGGATTTTTATTTGTTTGATTTATAGGTTtga                                                                                                                     >  2:171272/1‑143 (MQ=255)                            attatCTCTGCAGGGACGTTTGAAAAAATTGGTCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAata                                                                                                               <  1:487013/143‑1 (MQ=255)                                 ctctcCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAATGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑tct                                                                                                         <  1:228944/143‑1 (MQ=255)                                 ctctcCAGAGACATTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑tct                                                                                                         <  1:453579/143‑1 (MQ=255)                                     ctatggACGTTTGAAAAAATTGGTCCGATTATTCGCGCAACGCTAAACAGTTAAATTAATATTATTTATAATCTCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTa                                                                                                     <  1:10275/139‑1 (MQ=255)                                        gggACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTCATATTATTTATAAACCCATAATTACAGAAAATAAATATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAAt                                                                                                  >  2:8674/1‑143 (MQ=255)                                         ggACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTAAGGGTATTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTACATa                                                                                                 >  2:549680/1‑143 (MQ=255)                                              tttGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTGCAGAAAATAATTATGGGATTTTTATTTGTTTTATTTTTTGGTTTGGTGAATATT‑TCTCTTAAATAGAGta                                                                                            >  2:90117/1‑142 (MQ=255)                                              tttGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTg                                                                                            >  2:185108/1‑143 (MQ=255)                                                 gAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACCGAAAATAATTATGGGTTTTTTCTTTGTTTGCTTTATAGGTTTGATGAATATT‑TCTCATAAATAGAGTGAAt                                                                                         >  2:569681/1‑143 (MQ=255)                                                    aaaaTTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGCGTGAATGtt                                                                                      >  1:192248/1‑143 (MQ=255)                                                    aaaaTTGATCAGAGTATTAACTCAACTCTAAACAGTTAAATTTATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGtt                                                                                      <  1:20188/143‑1 (MQ=255)                                                     aaaTTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAAGTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTg                                                                                     <  2:602010/143‑1 (MQ=255)                                                      aaTTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATGTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGc                                                                                    <  2:733316/143‑1 (MQ=255)                                                       aTTCGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATTTTCCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCa                                                                                   <  2:202424/143‑1 (MQ=255)                                                           gttctagtattCGCGCAAATATAAATAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCa                                                                               <  1:649999/136‑1 (MQ=255)                                                           gcacGATGAGTCGCGTAACGCTAAGCAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCa                                                                               <  1:309847/140‑1 (MQ=255)                                                                 tgtttcactcAACACTAAACAGGTAAATTAATATTATTTATTATTTCATTATTTTATATAATTATTATGGGTTTTGTATTTGGTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCAGTggaa                                                                         <  2:238329/134‑1 (MQ=255)                                                                     tCGGGCAACGGTAAATAGGTAAATTAATATTATTTATAAACCCATAATGACAGAAAAGAATTATGGGTTTTTGATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCAGTggaaggaa                                                                     <  2:595082/143‑1 (MQ=255)                                                                             cGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATTTTGCATTCAGTGGAAGAAATTTACaaa                                                             >  2:511304/1‑143 (MQ=255)                                                                                               atatTATTTATACACCCATAATGACAGAAAAGAATTATGGGTTTTTTATTTGTGTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAAtt                                           <  2:73640/143‑1 (MQ=255)                                                                                               atatTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAAtt                                           <  2:409159/143‑1 (MQ=255)                                                                                                        atctgtctgtAAGTAGAGAGAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAATTATCACCAAc                                  <  1:538205/134‑1 (MQ=255)                                                                                                        ataacaccATAATTGCAGAGAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGGGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAATTATCACCAAc                                  <  1:603158/137‑1 (MQ=255)                                                                                                        ataAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTTTAGGTTTGATGAGTATT‑TCTCGTAAATAGTGTGAATGTTGCATTCAGTGGAAGGATTTTAAAAACTTAAGCTTCGGATAATTATCACCGAc                                  >  2:596024/1‑143 (MQ=255)                                                                                                        ataAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAATTATCACCAAc                                  >  2:395479/1‑143 (MQ=255)                                                                                                             cccATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTACATATTGTGTATGTTGCATTCAGGTGAATGAGTTTACAAACTTCTGTTTACGCTTACTATCACAAACtagaa                             >  1:208044/1‑139 (MQ=255)                                                                                                                aTAAATACATAAAAGAGTTATGCGTTTATTGCTTGCTTGATTTATGGGTTTG‑TTCTTATTGGCTCCCAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAATTATCACCAACTGGTAAAg                          <  2:727094/143‑1 (MQ=255)                                                                                                                          aaaaTAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTTATGAATATT‑TCTCTGAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAATTATCACCAACTGGTAAAGTGAGCGCCGt                <  2:496783/143‑1 (MQ=255)                                                                                                                          aaaaTAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCATCGGATAATTATCACCAACTGGTAAAGTGAGTGCCGt                >  2:117354/1‑143 (MQ=255)                                                                                                                             ataatTATACGTTTTTTATTTGTTTGATTGATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAATTATCACCAACTGGTAAAGTGAGCGCCGTGga             <  1:657219/143‑1 (MQ=255)                                                                                                                             aaaatTATGGGTTAGTTATTTGGTTGATTTATAGGGTTGATGTATATG‑TCTCTAAAATAGAGTGAATGTTGCATTCAGTGGAATGAATTTACAAACTTCAGCTTCGGATAATTATCACCAACTGGTAAAGTGAGCGCCGTGga             <  1:234277/141‑1 (MQ=255)                                                                                                                               aatTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAATTATCACCAACTGGTAAAGTGAGCGCCGTGgaga           <  1:171272/143‑1 (MQ=255)                                                                                                                                 ttATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAATTATCACCAACTGGTAAAGTGAGCGCTGTGGAGAtt         >  1:161976/1‑143 (MQ=255)                                                                                                                                    tGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAATTATCACCAACTGGTAAAGTGAGCGCCGTGGAGATTTcc      <  2:397198/143‑1 (MQ=255)                                                                                                                                        ttttttATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAATTATCACCAACTGGTAAAGTGAGCGCCGTGGGGATTTCCCCCt  >  2:156673/1‑143 (MQ=255)                                                                                                                                           |                                                                                                                                             TATCGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTACAGAAAATAATTATGGGTTTTTTATTTGTTTGATTTATAGGTTTGATGAATATT‑TCTCTTAAATAGAGTGAATGTTGCATTCAGTGGAAGGAATTTACAAACTTCAGCTTCGGATAATTATCACCAACTGGTAAAGTGAGCGCCGTGGAGATTTCCCCCT  >  NC_000913/617949‑618226

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.