| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3394454 = | 36 (0.890) | 3 (0.080) | 3/270 | 5.5 | 8.2% | coding (1803/3801 nt) | yhdP | DUF3971‑AsmA2 domains protein |
| ? | NC_000913 | 3394493 = | 33 (0.860) | coding (1764/3801 nt) | yhdP | DUF3971‑AsmA2 domains protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCTTTCAGCGGTGTCTCATCAAAGTAAGGGCCAACGGCTTTACCCGGACCTTTAATGTCAGCGTCAATCAGCAGTTTTTCTTTTGAGTAGTCAGGGATCACTGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTAATAAAGTCCAGTTCAATATCA‑AGGTTAGTTAATGCAGGCCAGTCCGGCTGGAAGGCAAACTTCGCGTTGCGCAGCGGCACCAGCACTTCAAACTGACCTTCGTT > NC_000913/3394320‑3394594 | tCTTTCAGCGGTGTCTCATCAAAGTAAGGGCCAACGGCTTTACCCGGACCTTTAATGTCAGCGTCAATCAGCAGTTTTTCTTTTGAGTAGTCAGGGATCCCTGCGGTAAGATTACTCGCCCGCACCCCGCTCCGCTTAACGcg > 2:518033/1‑142 (MQ=255) gctgaccaAAGTATTGGCCAACGGCTTTACCCGGACCTTTAAGGTCAGCGTCAATCAGCAGTTTTTGTTTTGAGTAGTCAGGGATCACTGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCGTCGGTTTTCATc < 1:319955/137‑1 (MQ=255) aaaGTAAGGGCCAACGGCTTTACCCGGACCTTTAATGTCAGCGTCAATCAGCAGTTTTTCTTTTGAGTATTCAGGGATCACTGCGGTAAGATTACTCGCGCGCTCGCCGCCCCGATTTTCGCCATCGGtattattttctacac > 2:326524/1‑132 (MQ=255) aGTAAGGGCCAACGGCTTTACCCGGACCTTTAATGTCAGCGTCAATCAGCAGTTTTTCTTTTGAGTAGTCAGGGATCACTGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACcg < 2:167074/143‑1 (MQ=255) tAATGGCCAACGGTTTTACCTGTTCCTTTAATGTCAGCGTCAATCAGCAGTTTTTCTTGTGAGGAGTCAGGGATCACTGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACcgtc < 2:469786/143‑1 (MQ=255) tAAGGGCCAACGGCTTAACGCGGACCATTAAAGACAGCGTCAATCAGCAGTTTTTCTTTTGAGTAGTCAGGGATCACTGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACcgtc < 2:120946/143‑1 (MQ=255) gtccatcttcTTTACCCGGACCTTTAATGTCAGCGTCAATCAGCAGTTTTTCTTTTGATTAGTCAGGGATCACTGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCAGCCATAAACCGTCGTta < 2:157753/134‑1 (MQ=255) aaCGGCTTTACCCGGACCTTTAATGTCAGCGTCAATCAGCAGTTTTTCTTTTGAGTAGTCAGGGATCACTGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTtaataa > 2:307013/1‑143 (MQ=255) ggttcTTTAATGTCAGTGTTTATCTTCCGTTTTTCTTTTGAGTAGGCAGGGAGCACGGCGGTAAGACTACGCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTAATAAAGTCCAGTTCAat < 2:80477/139‑1 (MQ=255) aCCTTTAATGTCAGCGTCAATCAGCAGTTTTTCTTTTGAGTAGTCAGGGATCACTGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTATTCATCCAGAAACCGTCGTTCATAAAGCCCAGTTCAatat > 1:374571/1‑143 (MQ=255) tttAATGTCAGCGTCAATCAGCAGTTTTTCTTTTGAGTAGTCAGTGATCACTGCGGTAAGATTACTCGCGCGCAAGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAAACGTCGTGAATAAAATTCAACTAAATATCa‑a > 1:191709/1‑143 (MQ=255) tttAATGTCAGCGTCAATCAGCAGTTTTTCTTTTGAGTAGTCAGGGATCACTGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTCATATCGTCCAGTTCAATATCa‑a > 2:419865/1‑143 (MQ=255) tGTCAGCGTCAATCAGCAGTTTTTCTTTTGAGTAGTCAGGGATCACTGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATCAACCGTCGTTAATACAGTCGAGTTCCATATCA‑CGgcta > 1:655788/1‑143 (MQ=255) tGTCAGCGTCAATCAGCAGTTTTTCTTTTGAGTAGTCAGGGATCACTGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAACCCGTCGTTAATACACTCCCGTTCAATATCA‑CGgttg > 2:120993/1‑142 (MQ=255) gTCAGCGTCAATCAGCAGTTTTACTTTTGAGTAGTCAGGGATCACGGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTAATAAAGTCCAGTTCAATATCA‑AGgttag < 2:355946/143‑1 (MQ=255) cGTCAATCAGAAGAATTTCTTTTGAGTAGTCAGGGATCACTGCGGTCAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGCTAATAAAATCCCGTTCAATATCC‑ACgttagttagt > 1:88505/1‑141 (MQ=255) gTCTATCGGCAGTTTTTCTTGTGAGTAGTCAGGGATCACTGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTAATAAAGTCCAGTTCAATATCA‑AGGTTAGTTAATg < 1:423700/143‑1 (MQ=255) cgctcggctgTTTTTCATTGTGGTATTCAGTCATCACTGCGGCTATATTACTCGCTGGCCCGCCGCCCAGATTAAGTTCATCTGTTTTCATCCATAATGCGTCGTTAATAAAGTTCAGTTCAATATCA‑AGGTTAGTTAATGCa < 1:286232/134‑1 (MQ=255) tttttCTTTTGAGTAGTCAGGGATCACTGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTACTAAAGTCCAGTTCAATATCA‑AGGTTAGCTAATGCAGGCCAGTCCg > 1:388517/1‑143 (MQ=255) ttcttcTGAGTAGTCAGGGATCACTGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTCATAAAGTCCACTTCAATATCA‑AGGATAGTTAATGCAGGCCAGTCCGGCt > 2:434641/1‑143 (MQ=255) aGGGATCACTGAGGTAAGAATACTCGCGCGCACGCCGCACAGATTAATGCCATGGGGTTTCATCAATAAACCGTCGTTAATAAAGTCCAGTTCAATATAA‑AGGTTAGTTAATGCAGGGGAGTCCGGATGGAAGGCAAAATTcg > 1:690715/1‑143 (MQ=255) ggttCACTGCTGTAAGATTACTCTCGCGCACGCCGCCTAGATTAACGCCAGCGGGTATCATCCATAAACCGTCGTTAATAAAGTCCAGTTCAATATCA‑AGGTTAGTTAATGCAGGCCAGTCCGGCTGGAAGGCAAACTTcgcg < 2:426212/140‑1 (MQ=255) tGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTAATAAAGGCCAGTTCAATATCA‑AGGTTAGTTAATGCACGCCAGTCCGGCTGGAAGGCAAAATTCGCGGTgcgcg > 1:458856/1‑142 (MQ=255) cGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTAATAAAGTCCAGTTCAATATCA‑TGGTTAGTTAATGCGTGCCAGTCCTGCTGGAAGGCAAACTTCGCGTTGCGCAGc > 2:30770/1‑143 (MQ=255) tAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTAATAAAGTCCAGTTCAATATCC‑AGGTTCGTTCATGCATGCCTGTCCGGCTGGAAGGCAAAATTCGCGtgtctgatgggt > 2:261484/1‑132 (MQ=255) aGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTAATAAAGTCCAGTTCAATATCA‑AGGTTAGTTAATGCAGGCAAGTCCGGCTGGAAAGCAAACATCGCGTTGCGCAGCGGcgc > 1:385248/1‑141 (MQ=255) aTTACTCGCGCGCACGCCACCCAGATTAACGCCATCGGGTTTCATCCATAAACCGTCGTTAATAAAGTCCAGTTCAATATGC‑AGGATAGTTAATGCACGCCAGTCCGGCTGGAAGGCACACTGCGCGTTACGCAGCGGCagcc > 1:346603/1‑140 (MQ=255) tACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTAATAAAGTCCAGTTCAATATCA‑AGGTTTGTTAATGCAGGCCAGTCCGGCTGGAAGGCAAACTTCGCGTTGCGCAGCGGCACCAGc > 2:378717/1‑143 (MQ=255) ctcgcgctcctcccgccCAGACTAATCCTATCGTTTTTCATCCATTTCCCCTCGTTAATAACGTCCAGTTCAATATCA‑AGGTTATTTACTTCAGGCCCGATCGGATGGTATGCAAACTTCGTGTTGCGAAGCGGCACCAGCAc < 1:482572/131‑1 (MQ=255) gcACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTAATAAAGACCAGATCAATATCA‑AGGGTAGCTAATGCAGGCCAGTCAGGCTGGAAGGCAAACTTGCCGTTGCGCAGCGGCACCCGCCCTACCAAc > 1:665843/1‑143 (MQ=255) cACGCCGCCTAGATTAACGCCATCGGTTTTCATCTATAAATCGTCGTGAATAAAGTCCAGTACAATATCA‑AGGTTAGTTAATGCAGGCCAGTCCGGCTGGAAGGCAAACTTCGCGTTGCGCAGCGGCACCAGCACTTCAAACt < 2:407969/143‑1 (MQ=255) aCGCCGCCCAGATTAACGCCATCGGTGTTCATCCATAAACCGTCGTTAATAAAGTCCAGTTCAATATCA‑CGGTTAGTTAATGCAGGCCAGTCCGGCTGGAAGGCAAACTTCGCGTCGCGCAGCGGCACCAGCCCTTCAAACTg > 1:728883/1‑143 (MQ=255) cgccgcCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTAATAAAGTCCAGTTCAATATCA‑AGGTTAGTTAATGCAGGCCAGTCCGGCTGGAAGGAAAAGTAGACGTTTCTCAGCGGCACCAGCACTTCAAACTGa < 1:398033/143‑1 (MQ=255) ccAGATTAACGCCATCGGTTTTCATCCATATACCGTCGTTAATAAAGTCCAGTTCAATATCA‑AGGTTAGTTAATGCAGGCCAGTCCGGCTGGAAGACAAACTTCGCGTTGCGCAGCGGCACCAGCACTTCAAACTGACCTTCg < 2:33020/143‑1 (MQ=255) cataTTAACGCCATCGGTTTTCATCCATAAACCGTGGCTAATAAAGTCCAGTTCAAGATCA‑AGGTTAGTTAATGCAGGCCAGTCCGGCTGGAAGGCAAACTTCGCGTTGCGCAGCGGCACCAGCACTTCAAACTGACCTTCGt < 2:645435/140‑1 (MQ=255) cAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTAATAAAGTCCAGTTCAATATCA‑AGGTTAGTTAATGCAGGCCAGTCCGGCTGGAAGGCAAACTTCGCGTTGCGCAGCGGCACCAGCACTTCAAACTGACCTTCGt < 2:710469/143‑1 (MQ=255) aGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTAATAAAGCACTGAT‑AAGACAACATGTTAGTTAATGCAGGCCAGTCCGGCTGGAAGGCAAACTTCGCGTTGCGCAGCGGCACCAGCACTTCAAACTGACCTTCGtt < 2:727015/143‑1 (MQ=255) | TCTTTCAGCGGTGTCTCATCAAAGTAAGGGCCAACGGCTTTACCCGGACCTTTAATGTCAGCGTCAATCAGCAGTTTTTCTTTTGAGTAGTCAGGGATCACTGCGGTAAGATTACTCGCGCGCACGCCGCCCAGATTAACGCCATCGGTTTTCATCCATAAACCGTCGTTAATAAAGTCCAGTTCAATATCA‑AGGTTAGTTAATGCAGGCCAGTCCGGCTGGAAGGCAAACTTCGCGTTGCGCAGCGGCACCAGCACTTCAAACTGACCTTCGTT > NC_000913/3394320‑3394594 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |