| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4001644 | 4001648 | 5 | 33 [0] | [0] 33 | corA | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 0 (0.000) | 32 (0.790) | 28/284 | 0.4 | 100% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 0 (0.000) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCG > NC_000913/4001512‑4001783 | tgagtgatcttgtcgaatcggactacgactagcgactgcgtgtacaatctaaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCctt < 2:544168‑M2/6‑1 (MQ=255) tgatcgtgccgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttc < 2:665687‑M2/10‑1 (MQ=255) ttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttctt > 2:659076‑M2/129‑143 (MQ=255) tgtcggaccggacgacgattagcgactgcgcgtataatttgatcttggtcatagggtggcaacccgccgggaacgggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCttt < 2:33613‑M2/16‑1 (MQ=255) gtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTg < 1:599641‑M2/17‑1 (MQ=255) gaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggcactggccgtcatcgatgcatcggcgcgtttctttgaagacgaaaacggcataaatATCCTTCTTCTTAATTGAAg > 2:237527‑M2/124‑143 (MQ=255) ctggacgacgacgagtgactgcgcgtacattctgaacttggccagagcctggcaacccgcccggaacgggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATg < 2:231721‑M2/23‑1 (MQ=255) gacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAg > 2:593284‑M2/115‑143 (MQ=255) tgtgtgtacaatctgaacttggtcggagcctggcaacccgccgggaactggaagacgacgaagcatcggcacggttcggtgaagacgacgacggcctgcatCGCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa < 2:82874‑M2/42‑1 (MQ=255) tgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgactacgtcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa > 2:206987‑M2/102‑143 (MQ=255) aatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgt > 1:36493‑M2/93‑143 (MQ=255) tctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaaggcgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGCAGCGGCAGAACACGCCGGTAACTCCACTGTgg > 1:434901‑M2/91‑143 (MQ=255) gagtgagtcagaccctggtaatccgctaggaactggaagacagcgaagcatctgcacgtttctttgaagacgacgacgggctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAtt < 1:665134‑M2/57‑1 (MQ=255) ttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgcagacgactacggcctgcatCTCCTTCTTCTTCTTTGATGATACGGAAGATCACGCAGGTAACTCAACTAATGCATTTAc > 2:629646‑M2/84‑143 (MQ=255) ttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgacgacgacgacggcctgcctCTCCTTCCTCTTCTTTGCAGATGCGTAAGATCACGCCGGTAACAACAATGTGGAATATAc > 2:482104‑M2/84‑143 (MQ=255) cctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGAt < 1:380479‑M2/70‑1 (MQ=255) ggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAAATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgt > 2:571596‑M2/71‑143 (MQ=255) ccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGCGGCATTTACCATCCGTGCtggtcgtccg > 1:649502‑M2/65‑141 (MQ=255) gccgcggactggaagagagcgaagcagcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt < 2:289674‑M2/81‑1 (MQ=255) gcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt > 2:143178‑M2/63‑143 (MQ=255) gcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACACCGGTAACTACACTGTGGCATTTACCATCCGTGATGGTCGTCCGtt > 2:391955‑M2/63‑143 (MQ=255) tggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCAAGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGATTACTCTgcg > 1:684723‑M2/54‑143 (MQ=255) aagatttctaagcatcggcacgtttctttgaagacgacggcgggctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtga < 2:475209‑M2/93‑1 (MQ=255) cgaagcatgggcaggtttcttctaacacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCATGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 1:279830‑M2/100‑1 (MQ=255) aagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAGGATCACGCCGGTAACTCCACTGTGGCATTTAGCATACGTGATGGTCGGATGTTTACTCTGCGTGAGCGTGAACt > 2:612299‑M2/42‑143 (MQ=255) gcgccccggttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGATGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCg < 1:122387‑M2/107‑1 (MQ=255) ttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTGTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTc > 1:686263‑M2/28‑143 (MQ=255) tttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTCTTCGCCTGt > 2:691166‑M2/25‑143 (MQ=255) gacgacgacggcctgcatCTTCTTCTGCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCCTTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTa < 1:329843‑M2/125‑1 (MQ=255) gacgacgacggcctgcatCTCCTTCTTCTTCTTTGAATATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTa < 1:10833‑M2/125‑1 (MQ=255) acggtctgtctcTCCTTCTTCTTCGTTGAAGATGCGGAACATCACGCCGTTAACTCCACTGTGTCATCTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGc < 1:572322/132‑1 (MQ=255) gcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTCTCGTATGCGTGCCCg > 2:390569‑M2/9‑143 (MQ=255) gcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATACGTGATGGGCGTCTGTTTACTCCGCGTGAGCGTGAACTGCCCGCTTTTCTTCGGTACTGTGTGCGtgccag > 1:34041‑M2/9‑141 (MQ=255) | GATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCG > NC_000913/4001512‑4001783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |