New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 458787 =3 (0.040)71 (1.010) 62/278 0.1 96.0% intergenic (+87/‑101) clpX/lon ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
?NC_000913 608011 = NA (NA)intergenic (+23/‑54) hokE/insL1 toxic polypeptide, small/IS186 transposase

Only 100 of 182 total aligned reads displayed.

GCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTG  >  NC_000913/458645‑458929
                                                                                                                                              |                                                                                                                                              
ccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttgagttagcgcttatg                                                                                                                                                <  1:1106916‑M1/1‑1 (MQ=255)
ccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaagcatatcaggcgtaataccacaacccttaagttagcgcttatg                                                                                                                                                <  1:997237‑M1/1‑1 (MQ=255)
ccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccacaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaaccctcaagttagcgcttatg                                                                                                                                                <  1:502381‑M1/1‑1 (MQ=255)
ccccggcattacgtgccgaagtatccagtgcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatg                                                                                                                                                >  2:621447‑M1/143‑143 (MQ=255)
 cccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgg                                                                                                                                               <  1:487802‑M1/2‑1 (MQ=255)
 cccggcattacgtgccgaagtatccagttcttcgggcttaccaatacgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcacgcgtaataccccaccccttaagttcccgcctatgc                                                                                                                                               <  1:28386‑M1/2‑2 (MQ=255)
  ccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggg                                                                                                                                              >  2:914826‑M1/141‑143 (MQ=255)
  ccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcgacacgtgaaatcatatcagccgtaatactacgacccttaagttagagattatggg                                                                                                                                              <  1:176726‑M1/3‑1 (MQ=255)
    aCCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGa                                                                                                                                            >  1:388315/1‑143 (MQ=255)
      cgtggcggggttATGGCAAGCGGGAAGCGAAACGGGGATCTGGTGATGGAGTAACCATTCCCATACAGGTAGTTATCCAAAAAGGGGGGATTTTATCGCCCCTTTAATTTTTCCTCGATTCTCGGCGTTGAATGTGGGGGaaa                                                                                                                                          <  1:708615/133‑1 (MQ=255)
       attacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAAc                                                                                                                                         >  1:1180029‑M1/136‑143 (MQ=255)
            tGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCC                                                                                                                                    >  2:996928‑M1/1‑143 (MQ=255)
            tGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCC                                                                                                                                    >  2:511686‑M1/1‑143 (MQ=255)
            tGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGAATGTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCC                                                                                                                                    >  2:1046167‑M1/1‑143 (MQ=255)
            tGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCAAACTGTTAGGTTACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCC                                                                                                                                    >  2:471174‑M1/1‑143 (MQ=255)
              aTTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCat                                                                                                                                  >  2:189540‑M1/1‑141 (MQ=255)
                      cAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctc                                                                                                                          >  2:1142899‑M1/1‑133 (MQ=255)
                       tccggttgttcgggcgtacccatatgggccagagttgctgacgagttatcgtgagagtaattcatcggcacgttgaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGAc                                                                                                                         >  1:1064588‑M1/120‑143 (MQ=255)
                       tccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATCTACTGAc                                                                                                                         <  2:546187‑M1/24‑1 (MQ=255)
                         gCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAACTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaact                                                                                                                       <  2:1155845‑M1/143‑14 (MQ=255)
                          agttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTa                                                                                                                      >  2:356119‑M1/117‑143 (MQ=255)
                          agttcttcgggcttaccaatatgggccagaattgctgaccaggtatcgtgagagtacttcatcggcccgttaaatcatatcaggcgtaataccacaacccttacgttagcgcttatGGGGAAACCTCCGCCTGTACTGACGTa                                                                                                                      <  1:920633‑M1/27‑1 (MQ=255)
                             tcttcgggcttaccaatacgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACAt                                                                                                                   >  1:1039826‑M1/114‑143 (MQ=255)
                              atgcgcaaCAGGCATCTGGCGAATAATGAACCCGTCTCACACAATTAGTTACCCAAAAAGGGGGGATGGTATCTGCCCTTTAATTTTTCCTCTAATCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagg                                                                                                                  <  1:902495‑M1/141‑19 (MQ=255)
                              aaGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGGTTTTCTCTCCCCTTTCATTTCTCCTCTGAACTCGTCTTTGAATGTGGGGGAAACATCCCataagcgctaacttaagg                                                                                                                  <  2:1246661‑M1/143‑19 (MQ=255)
                              aaGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagg                                                                                                                  <  2:1093997‑M1/143‑19 (MQ=255)
                               ttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGt                                                                                                                 >  2:832‑M1/112‑143 (MQ=255)
                                 cgcAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggtt                                                                                                               >  1:1031426‑M1/1‑122 (MQ=255)
                                   cAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagccctaacttacgggatcc                                                                                                             >  2:275377‑M1/1‑120 (MQ=255)
                                        cacaatatggcccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATg                                                                                                        >  1:134036‑M1/103‑143 (MQ=255)
                                         gCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTATCCAAAAAGGGGGGATTTTAGCTCCCCTTTAATTTTTCCTCTAGTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatc                                                                                                       <  2:1212178‑M1/143‑30 (MQ=255)
                                         ccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATgg                                                                                                       >  2:415705‑M1/102‑143 (MQ=255)
                                          caatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgtgaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGc                                                                                                      <  2:700198‑M1/43‑1 (MQ=255)
                                          caatatgggccagaattgctgaccagttatcgtgagagaaatgcaccggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGc                                                                                                      <  1:268209‑M1/43‑1 (MQ=255)
                                            atatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGt                                                                                                    <  2:26064‑M1/45‑1 (MQ=255)
                                               tgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGaa                                                                                                 >  2:398686‑M1/96‑143 (MQ=255)
                                                 tGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaat                                                                                               >  2:128976‑M1/1‑106 (MQ=255)
                                                 ggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGc                                                                                               <  1:453149‑M1/50‑1 (MQ=255)
                                                  gAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatg                                                                                              >  2:335212‑M1/1‑105 (MQ=255)
                                                        ttAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaccttacgggttgaaccatctgaagcatgcgacgc                                                                                        >  1:745081‑M1/1‑99 (MQ=255)
                                                        ttAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgc                                                                                        >  1:961916‑M1/1‑99 (MQ=255)
                                                        ttAACCATTCCCATACAAGTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTATCGGCGTTGAATGTGGGGTCAACATCCCataagcgctaacttaagggttggaccatctgtagactgcgacgc                                                                                        >  1:506138‑M1/1‑99 (MQ=255)
                                                        gtgaccaTTTGCATATAATTAGTTAACCCAAACGGGGGGATTTTATCGCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGAGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgc                                                                                        <  1:110809‑M1/140‑45 (MQ=255)
                                                              aTTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggt                                                                                  <  2:907223‑M1/143‑51 (MQ=255)
                                                               accagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATc                                                                                 <  2:877398‑M1/64‑1 (MQ=255)
                                                               accagttagcgtgggaggaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACAGCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATc                                                                                 >  1:579105‑M1/80‑143 (MQ=255)
                                                                 cccATCCAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcc                                                                               <  2:1023132‑M1/143‑54 (MQ=255)
                                                                 cagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagatagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGCGACATCTg                                                                               <  1:985829‑M1/66‑1 (MQ=255)
                                                                  ccATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCTataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcct                                                                              >  2:893175‑M1/1‑89 (MQ=255)
                                                                  ccATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcct                                                                              >  2:899179‑M1/1‑89 (MQ=255)
                                                                  ccATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATACCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcct                                                                              >  1:1132173‑M1/1‑89 (MQ=255)
                                                                  agtgatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGa                                                                              >  2:606103‑M1/77‑143 (MQ=255)
                                                                   cATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGTGGAACCATCCCataagcgctaacttaagggttgaaccatctgaacaatgcgacgcctcggtgcctc                                                                             >  1:876424‑M1/1‑88 (MQ=255)
                                                                    aTACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcg                                                                            >  1:367135‑M1/1‑87 (MQ=255)
                                                                       tcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTAcc                                                                         <  2:949904‑M1/72‑1 (MQ=255)
                                                                        aaTTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaa                                                                        >  2:739919‑M1/1‑83 (MQ=255)
                                                                         gtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTTCTCGATATCGTGAGTCACAGTCGAGTCATATGATTACCTg                                                                       <  2:632655‑M1/74‑1 (MQ=255)
                                                                          ttAGTTATCGAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTTCTCCATTCTCGGCGTTTAATGTGGGGGAAACATCCCataagcgctaacttacgggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaaga                                                                      <  1:345712‑M1/143‑63 (MQ=255)
                                                                          tgatttacccAGAAGGGGGGGATTTTATCTCCCCTTGAATTTTTCCTCTATTCTCGGCGTCGAATGTGGGGGAAACAGCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaaga                                                                      <  1:423893‑M1/139‑63 (MQ=255)
                                                                          tgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTgg                                                                      <  1:412843‑M1/75‑1 (MQ=255)
                                                                               gtagtgcagcgccacgttaaagcatagcaggcgcaataccacaacgcttaagttagcgcttatGGGGAAACATCCTCATATACTGACGTACATGTTAATAGAGGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaa                                                                 >  1:627664‑M1/64‑143 (MQ=255)
                                                                                taattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGTCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaaa                                                                >  2:264203‑M1/63‑143 (MQ=255)
                                                                                      atcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAAc                                                          <  2:1202739‑M1/87‑1 (MQ=255)
                                                                                      atcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAAc                                                          >  1:546187‑M1/57‑143 (MQ=255)
                                                                                         ggggggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttc                                                       >  1:238360‑M1/1‑66 (MQ=255)
                                                                                          gggggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcgctgcctcggtaagacgatgcctcgcgtgct                                                      >  1:65704‑M1/1‑65 (MQ=255)
                                                                                          gggggATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgccccgcctcgttgcctcgttaagacgatccctcgcgttct                                                      >  2:225485‑M1/1‑65 (MQ=255)
                                                                                          gcacgttaaatcatatcaggcgtaataccacaacccttaagtaagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAag                                                      <  1:756820‑M1/91‑1 (MQ=255)
                                                                                             cgttaaatcatatcgggcgtaataccacaaccctgaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAagaga                                                   >  1:512540‑M1/50‑143 (MQ=255)
                                                                                                 tttATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattg                                               <  2:1031426‑M1/143‑86 (MQ=255)
                                                                                                   tacctccccTTTCATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcg                                             <  2:77909‑M1/140‑88 (MQ=255)
                                                                                                   tATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcg                                             <  2:715455‑M1/143‑88 (MQ=255)
                                                                                                     tctcCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgtt                                           <  2:764564‑M1/143‑90 (MQ=255)
                                                                                                       tatcaggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATg                                         <  2:669617‑M1/104‑1 (MQ=255)
                                                                                                        atcaggcgtaataccacaacctttaggttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGa                                        >  1:1121579‑M1/39‑143 (MQ=255)
                                                                                                         cccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgaaccgcctcagtgcctcgttaagacgatgcctcgcgctcttccattgcgttttgt                                       >  1:262304‑M1/1‑50 (MQ=255)
                                                                                                          ccTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgccacggtgcctcgataagacgatgcctcgcgatcttcaattgcgctgagta                                      >  1:779225‑M1/1‑49 (MQ=255)
                                                                                                            tttAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtagg                                    >  2:155242‑M1/1‑47 (MQ=255)
                                                                                                            ggcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATcc                                    >  1:577855‑M1/35‑143 (MQ=255)
                                                                                                             gcgtaataccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCt                                   <  1:898345‑M1/110‑1 (MQ=255)
                                                                                                               gtaatacgacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGa                                 >  2:382833‑M1/32‑143 (MQ=255)
                                                                                                                 tttttCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttccattgcgttttgtaggctgtc                               >  1:507622‑M1/1‑42 (MQ=255)
                                                                                                                 tcttccctgtatTCTCGGCGCTGAACGTGGGGCAAACCTCCCataagcgctaacttaagggttgaaccatctgaagaatgccacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtc                               <  2:3183‑M1/138‑102 (MQ=255)
                                                                                                                  ttttCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattccgttttaaagacaggca                              >  2:1105865‑M1/1‑41 (MQ=255)
                                                                                                                  gtgtcctCTATGCTCGGCGTTGAACGGGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacggtgcctcgcgttcttcaattgcgttttgtaggctgtca                              <  1:689564‑M1/140‑103 (MQ=255)
                                                                                                                     ccacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACCAAGAGAGAGCTCTATGAATCCTGAGCGTTc                           <  1:198809‑M1/118‑1 (MQ=255)
                                                                                                                      cacaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCt                          >  2:50645‑M1/25‑143 (MQ=255)
                                                                                                                       acaacccttaagttagcgcttatGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTg                         <  2:963629‑M1/120‑1 (MQ=255)
                                                                                                                        tctATTCTCGGCGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgacgaatgcgacgcctccgtgcctcgttaagacgatgcctcgcgttcttcaattgcggtttgtgggctgtcagggaga                        >  2:814142‑M1/1‑35 (MQ=255)
                                                                                                                          tATTCTCGGCGTTGAATGTGGGGGCAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttccatcgcgttttgccggctctcagggacact                      >  1:326741‑M1/1‑33 (MQ=255)
                                                                                                                            ttCTCGGCGTGGAAGGTGGTGGAAACATCCCataggcgctaactgaaggggtgaaccatctgaagcatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgt                    <  1:722314‑M1/143‑113 (MQ=255)
                                                                                                                            ccttaagttagcgcttgtGGGGAAACGGCCCCGTATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGc                    >  1:978478‑M1/19‑143 (MQ=255)
                                                                                                                                aagttagcgcttatGGTGAAACATCCCCATATACTGACGTACAGGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTg                >  1:300526‑M1/15‑143 (MQ=255)
                                                                                                                                  gttagcgcttatGGGAAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAACCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGCATCGTGAGCGTCCTGAACGCAATGaa              <  1:1056999‑M1/131‑1 (MQ=255)
                                                                                                                                   cGTTGAATGTGGGGGAAACATCCCattagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttgaattgcgttttgtaggctgtcagagatactgtcccacga             >  1:1192006‑M1/1‑24 (MQ=255)
                                                                                                                                   cGTTGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacga             <  2:290613‑M1/143‑120 (MQ=255)
                                                                                                                                     ttGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcaggggtactgtcccacgaat           >  2:616702‑M1/1‑22 (MQ=255)
                                                                                                                                      tGAATGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagagtgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggcggtcagggatactgtcccacgaatg          <  1:102608‑M1/143‑123 (MQ=255)
                                                                                                                                        aaTGTGGGGGAAACATCCCataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggc        <  2:1002350‑M1/143‑125 (MQ=255)
                                                                                                                                              ggggAAACATACCataagcgctaacttaagggttgaaccaactgaagaatgcgacgcctcggtgcctcgttaagacgatacctcgagttcttcaattgcgtttgctaggctgtaaggtatacgttcccacgcatgtccccctg  >  1:527573‑M1/1‑13 (MQ=255)
                                                                                                                                              |                                                                                                                                              
GCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTG  >  NC_000913/458645‑458929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.