Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3796957	3797778	822	20 [19]	[18] 20	waaL	O‑antigen ligase

TGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGGACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTACACTCTGAAATCATCAATGATTTTAGAGATAAT  >  NC_000913/3796718‑3797017                                                                                                                                                                                                                                               |                                                              tGCCCGCGTTCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGGACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGATAAGTTATCATCATTATAAAGGTAAAACATGCTAACAt                                                               <  2:256761/239‑1 (MQ=255)               cgtgggCTAATTTTGTAGTTCCTGGGGATACGGGTTTAAGGCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGGGCCAACCGATCCGGGATTAATTTGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACttca                                                  <  1:505653/235‑1 (MQ=255)                    gCTAAATTTGTTGTTTCGGTGGATTCGGGGTTAAGCCATTTAACGGCGTCATTGGATAGACCCAATATCACGGTTTATGGACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTtcattcat                                             <  2:776583/238‑1 (MQ=255)                      tAAATTTGTTTGGTCGGTGGATACGGGGTTAAGCCATTTAACGGCCGCAATGGATAGACCCAATATCACGGTGTATGGACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTg                                           <  1:833468/238‑1 (MQ=255)                       aaaTTTGGAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGGACCAAACGATACGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGaa                                         <  2:891051/239‑1 (MQ=255)                              tAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGGGCCAACCGATCCCGGGTTAATTGGGGGGGATGGGTAGAATCAGATGGGATTTAGGGGTCCAAGAGAAAATTTAAATAACCCCAACAGACAAGCAGTTTTGGAAAAGTTATAATCATTATAAAAGTAAAACATGGTAAAATCCTTTAAAATTATTTTATTTAAAACTTaa                                  >  1:337272/1‑238 (MQ=255)                               tgtttgggtggtTTCGGGTTTTAGGCATTTAACGGTGGGTGTGGATAGACCCAATATCACGGTTTATGGACCAACCGATCCGGGATTAATTTGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTaca                                 <  1:301817/233‑1 (MQ=255)                                             cGGGGTTAAGCCATTTAACGGCGGCATGGGATAGACCCAATGTCACGGTTTATGGACCAACCGATCCGGGATTAATTGGGCGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTACACTCTGAAAtcatca                   <  2:66376/239‑1 (MQ=255)                                                      gCCATTTAACGGCGGCCTTTGATAGTCCCAATATCACGGTTTATGGGCCAACCGGTCCGGCATTAATTTGTGGGTTAGGGAAGAATCAGATGGTATGTAAGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTACACTCTGAAATCATCAATGATTTTa          <  1:602121/239‑1 (MQ=255)                                                              aCGGGGGCACGGGATAGCCCCAATTTCCCGGTTTATGGACCAACCGGTCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGGAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTACACTCTGAAATCATCAATGATTTTAGAGataat  <  1:803022/239‑1 (MQ=255)                                                                                                        aCCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCtt                                    <  1:389180/163‑1 (MQ=255)                                                                                                        aCCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCtt                                    >  2:389180/1‑163 (MQ=255)                                                                                                                                          aTCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTACACTCTGaa                          <  1:672943/139‑1 (MQ=255)                                                                                                                                          aTCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTACACTCTGaa                          >  2:672943/1‑139 (MQ=255)                                                                                                                                                            cTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTACAct                               <  2:360545/116‑1 (MQ=255)                                                                                                                                                            cTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTAAAct                               >  1:360545/1‑116 (MQ=255)                                                                                                                                                                                                          aaaGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTACACTCTGAAATCATCAATGATTTTAGAGataat  <  1:345522/99‑1 (MQ=255)                                                                                                                                                                                                          aaaGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTACACTCTGAAATCATCAATGATTTTAGAGataat  >  2:345522/1‑99 (MQ=255)                                                                                                                                                                                                                       ttATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTACACTCTGAAATCATCAATGATTTTAGAGataat  >  2:313701/1‑86 (MQ=255)                                                                                                                                                                                                                       ttATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTACACTCTGAAATCATCAATGATTTTAGAGataat  <  1:313701/86‑1 (MQ=255)                                                                                                                                                                                                                                               |                                                              TGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGGACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAAAGGTAAAACATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTACACTCTGAAATCATCAATGATTTTAGAGATAAT  >  NC_000913/3796718‑3797017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑