New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207805	14 (0.260)	46 (0.940)	32/382	NT	86.9%	coding (305/630 nt)	stfP	e14 prophage, uncharacterized protein
	?	NC_000913	= 1209602	1 (0.020)					pseudogene (18/501 nt)	stfE	pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

GTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1207568‑1207805 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggtttgggagaaggCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGGGGGATTGATACAGGTCGCTCTATTTTAAGTATTCAGGGGT  <  NC_000913/1209602‑1209382                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCCCTTC‑GCGCGCTGCTGT‑TAAGCCGCACGAAGCCGTTTGGCGATATCAAATGGGAAGGCACCGGGCAAACGGCGCCTGAAAACCTTGGT                                                                                                                                                                                                                                           >  1:2615/1‑227   GGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTGGCCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTT                                                                                                                                                                                                                                          >  2:412482/1‑226        CCCCAAGACCGGCACGCCTGCCAGCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACGTTGCAGCGTGGTGGAGGCATCCGGTGGCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGA                                                                                                                                                                                                                                   <  2:433517/228‑1            CAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGCTTGGGAGAAGGC                                                                                                                                                                                                                               >  2:447517/1‑228              gcaCGGCACGCCTGCCGGCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTC                                                                                                                                                                                                                             <  2:326001/225‑1                   GCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCGCTCGAAAACCTTGGTTTGGGGGAAGGCTCTCCAT                                                                                                                                                                                                                        >  2:527853/1‑228                       GCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACC                                                                                                                                                                                                                    <  2:148679/228‑1                         CTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGGAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGGGCTGCTGT‑TAAGCCGCAAGAATCCGCTTGGCGATATCCAATCGGCGGGCCCTGTGCAAACGGCTCTCGGAGACCTTGGTTGGGGGGAAGGCCCGGCATTACCgt                                                                                                                                                                                                                  >  1:93476/1‑226                                  ATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGTGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGCTATCAAATCGGAGGGCACTGTGCAAACGGCTTTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTC                                                                                                                                                                                                          >  2:21647/1‑227                                   TCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGTCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGCTATCAAACCGGATGGCACTGGGCAAACGGCCCTCGAAAACCTTGGTTTGGGAGAGGGCCCGGCCTTCCCTGTTGGGGTC                                                                                                                                                                                                          >  1:331643/1‑226                                            TGACTAATTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCTCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGCTCTCACATCGGCTGGCACTGTGCAAACGGATCTCGAAAACACTGGTTTGGGGGAAGGATATCCCTTACCGGTTGGCGCCCCGGTTCCGc                                                                                                                                                                                                >  1:582982/1‑226                                                  CTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTC                                                                                                                                                                                         >  1:504111/1‑228                                                     TGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGAGGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGGAAAGGCTCGGCATTACCCGGTGGTGGCCCGGTTCCGTGGCCTTCAGC                                                                                                                                                                                      >  1:440880/1‑228                                                            TTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATCGCCCTGTCCAAACGGCTCGCGAAACCCTTGGTTTGGGAGAAGGCTCTGCATTACCGGTTGGGGTCCCGGTTCCCGGGCCTTCCGCCATTCCc                                                                                                                                                                               >  1:149177/1‑227                                                                        tTTTGCAGCGTGGTGGAGGCTTCCGGTGTCAGCCGGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGGTGCGGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGG                                                                                                                                                                  <  1:183950/227‑1                                                                           gGCAGCGGGGGGTGGGCATCCGGTGCCAGCCTGGAGAGGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTG                                                                                                                                                               <  1:646862/227‑1                                                                                CGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCCTTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCCCCCCG‑CCACCAGGCTGGCGGAAAa                                                                                                                                                           >  1:82633/1‑226                                                                                  TGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGGGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCTGGGCCTT‑AGCCCCCCCGCCCAACAGGCTGGCTGAAATGCA                                                                                                                                                        >  1:392755/1‑228                                                                                       ggggctcCCGGTGGCAGCCTGGAGAAGGGGCGGCCTGCCCGGTTTCTTCCCCGACGTCAGCGCG‑TGCTGT‑TAAGCCGCAAATATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGT                                                                                                                                                   <  1:21647/221‑1                                                                                            ATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAACCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCACCAGGCGGGCTGAAATGCCATGGTGCCGC                                                                                                                                              >  1:188955/1‑228                                                                                            ATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG                                                                                                                                                                                                                                >  2:229355/1‑147                                                                                             TCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGC                                                                                                                                                                                                                               <  1:229355/147‑1                                                                                                        CCTGGAGAATGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCCCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCCCTGCATTCACTGTTGGGTTCCCGGTCCCTTGGCCTTCAGCCACCCCG‑CAAACAGACTGGCGGCAATGCAATGGGGCCCGTTTTTTTGCTc                                                                                                                                   >  1:187303/1‑226                                                                                                         CTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAA                                                                                                                                 <  2:504111/228‑1                                                                                                               agGGGGCGGCGCG‑CCGGTTCCTTACCGAACTTC‑GCGCG‑TGTGGTATAAGCCGCAAGGATACGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACC                                                                                                                          <  1:372428/226‑1                                                                                                                     gGGCCCGGCCAGTTCCTTCCGCCACTTC‑GCGCGTTGCTGT‑TAAGCCGAAAGATTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTTTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTTTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAA                                                                                                                     <  2:392755/227‑1                                                                                                                          cggtCAGTTCCTTACCGCACTTC‑GCTCGCTGCGGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGC                                                                                                                <  2:555097/224‑1                                                                                                                           GACCTGTTACTTACCGCTCTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGC                                                                                                                <  2:561105/227‑1                                                                                                                                     tttCCGGACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGAAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCTCTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTAT                                                                                                      <  2:387859/224‑1                                                                                                                                       ACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGATTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCC                                                                                                    >  2:550554/1‑227                                                                                                                                       ACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGGGTCCCGGTTCCGTGGCCTTCAGCCCCTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCC                                                                                                    >  2:440327/1‑227                                                                                                                                               TC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTAGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACCGGCTGGCTGAAATGCAATGGGGCCGCTTTTTCTTCTGCAGAATACACGGACCTGGCCAAGGCGTCTCCGAGAAATAA                                                                                           >  1:80893/1‑228                                                                                                                                               TC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCAGCTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCACGGTTCCGTGGCCTTCAGCAACTCCG‑CAAACAGTCTGGGTTAAATGCACTGGTGCCGCTTTTTCTGCTGAGGAATACCGGGCACCTGCAAAGGCTTCTCCGcgaaacaa                                                                                           >  1:80902/1‑220                                                                                                                                                C‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGAGGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAA                                                                                          <  2:349285/228‑1                                                                                                                                                           TGT‑TAAGCCGCAAGAATCCGTTTGGCGATAACAAAGCGGATGGCAGTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATT                                                                                <  1:25639/228‑1                                                                                                                                                                  GCCGCAAGAATCCGTTTGGCGATAGCAAATCGGATGGCACTGTGCAAACGGCTTTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTCCCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTG                                                                          <  2:343186/228‑1                                                                                                                                                                   CCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAAAACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGG                                                                         >  1:415275/1‑228                                                                                                                                                                    cgaAAGAACCCGTTGGGCGATATCAAAGCGGATGGCACTGAGAAAACGGCTTTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGT                                                                        <  1:8750/225‑1                                                                                                                                                                     gaAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGT                                                                        <  2:82633/225‑1                                                                                                                                                                     GCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCACCAGGCTGGCTGAAATGCAATGGGGCCGCTTTTTCTGCTGCAGAATACCCGGAACTGGCACAGGCTTATCCGACCAATAAATTGCCTGCTTTACGGGGgg                                                                       >  1:84709/1‑226                                                                                                                                                                                                   ATGGCCCTGGGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGG                                          <  2:331643/227‑1                                                                                                                                                                                                   ATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGG                                          <  2:415275/227‑1                                                                                                                                                                                                   ATGGCACTGGGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGG                                          <  2:333796/227‑1                                                                                                                                                                                                            TGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCACCAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGCACTGGCAAAGGCTTATCCGCCAAATAAATTGCCTGATTTACGTGGTGAGTTTCTTCGTGGCTGGGATGACGGGCGGGGGATTGATA                                >  2:234931/1‑228                                                                                                                                                                                                            TGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGCAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATCCCCGGAACTGGCAAAGGCTTTTCCGACAAATAAATTGCCTGATTTACGTGGTGAGTGTATTCGGGGCTGGGATGACGGACGGGGGATTGctc                                >  2:47721/1‑225                                                                                                                                                                                                            TGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCCAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGGGAGTTTATTCGTGACTGGGGTGACGGGAGGGGGTTTGATA                                >  1:18793/1‑228                                                                                                                                                                                                                 ACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGCCGGGGGATTGATACAGac                           >  2:80993/1‑226                                                                                                                                                                                                                    gcctctGAAAACCTTGGTTTGGGACAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGGGGGATTGATACAGGTCGC                        <  2:440880/222‑1                                                                                                                                                                                                                     tttcCGAAACCCTTGGTTTGGGAGAAGGCTCGGCATTCCCTGTTGGGGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGGGGGATTGATACAGGTCGCT                       <  1:447517/224‑1                                                                                                                                                                                                                     CTCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATGACCTGTGGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCT‑GCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGGGGGATTGATACAGGTCGCT                       <  2:483640/228‑1                                                                                                                                                                                                                      TCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGGGGGCTTGATACAGGTCGCcc                      >  2:464899/1‑226                                                                                                                                                                                                                      TCTCGAAAACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATAACCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGACTTCAGGGGTGAGTTTATTCGTGGCTGGGATGACGGGCGGGGGATTGATcaaggacccgc                      >  2:459219/1‑217                                                                                                                                                                                                                      TCTCGAAAACATTGGTTTGGGAGCAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCACTGGTGCCGCTTTTTCTGCTGCAGAATACCCGGAACTGGCCAAGCCTTATCCGACAAATACATTGCCTGCATTACGTGGGGAGTTTGTTCGTGGCTGGGGTTACGGGGCGGGGATTGATCAAGGTtggtt                      >  1:234707/1‑223                                                                                                                                                                                                                              ACCTTGGTTTGGTGAAAGGGTCTGTATTACCTGTTGGGTTCCGGGTTCCGTGTCGTTCAGCCACTCCG‑ACAACAGGCTGGCTGAAATGCAAGGGTGCCGCTTTTTCTGCTGAAGAATACCCGGATCTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTGTATTCGTGGCTGGGATGACGGGCGGGGGATTGATACAGGTCGCTCTATTTTAA              <  1:459219/228‑1                                                                                                                                                                                                                              ACCTTGGTTTGGGAGAAGGCTTTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGGGGGATTGATACAGGTCGCTCTATTTTAA              <  2:587815/228‑1                                                                                                                                                                                                                              ACCTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGGCCCGGTTCCGTTGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGGGGGATTGATACAGGTCGCTCTATTTTAA              <  2:412492/228‑1                                                                                                                                                                                                                              ACCTTGGTTTGGGAAAAGGCTCTGCCTTACCTGGTGGTGTCCCGGTTCCGGTGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGGGGGATTGATACAGGTCGCTCTATTTTAA              <  1:440327/228‑1                                                                                                                                                                                                                                     TTTGGGAGAAGGCCCTGGATTACCTGTTGGTGGCCCGGTTCCGTGGCCTTCAGCTACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGATTTTTCTGCTGAAGAATGCCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGGGGGATTGATACAGGTCGCTCTATTTTAAGTATTCA       <  2:188955/228‑1                                                                                                                                                                                                                                        gggatgAGGCTCTGAATTACCGTTTTGTTTCCCGGTTCCGTGGCTTGCAGGCATGACG‑CCAACAGTCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATGCCCGGAACTGGCAAATGCGTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGGGGGATTGATACAGGTCGCTCTATTTTAAGTATTCAGGG    <  2:582982/222‑1                                                                                                                                                                                                                                        GGGCGAAGTCTGTGCATTGACTGTTGGTGTCCCGGTTCCGGGGACTGCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGGGGGATTGATACAGGTCGCTCTATTTTAAGTATTCAGGG    <  2:301699/228‑1                                                                                                                                                                                                                                          GAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGGGAGTTTATTCGTGGCTGGGATGACGGGGGGGGGATTGATAAAGGTGGCTCTTTTTTCATGATTCAGGGGa  >  1:30027/1‑227                                                                                                                                                                                                                                             AAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGC                                                                                                                >  2:168497/1‑115                                                                                                                                                                                                                                              AGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCA                                                                                                               <  1:168497/115‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTC‑GCGCGCTGCTGT‑TAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1207568‑1207805 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggtttgggagaaggCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCG‑CCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGGGGGATTGATACAGGTCGCTCTATTTTAAGTATTCAGGGGT  <  NC_000913/1209602‑1209382

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.