New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 120780514 (0.260)46 (0.940) 32/382 NT 86.9% coding (305/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 = 1209602 1 (0.020)pseudogene (18/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

ACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGC  >  NC_000913/1209382‑1209829
                                                                                                                                                                                                                             |                                                                                                                                                                                                                                   
tcccctGAATCATGAAAAAAGAGCCACCTTTATCAATCCCCCCCCCGTCATCCCAGCCACGAATAAACTCCCCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctc                                                                                                                                                                                                                              >  1:30027‑M2/2‑221 (MQ=255)
  cccTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATACGCATTTGCCAGTTCCGGGCATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGACTGTTGGCGTCATGCCTGCAAGCCACGGAACCGGGAAACAAAACGGTAATTCAGAGcctcatccc                                                                                                                                                                                                                            <  2:582982‑M2/228‑10 (MQ=255)
  cccTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGCAGTCCCCGGAACCGGGACACCAACAGTCAATGCACAGacttcgccc                                                                                                                                                                                                                            <  2:301699‑M2/228‑10 (MQ=255)
     tGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGCATTCTTCAGCAGAAAAATCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTAGCTGAAGGCCACGGAACCGGGCCACCAACAGGTAATCCAGGGccttctcccaaa                                                                                                                                                                                                                         <  2:188955‑M2/228‑13 (MQ=255)
            ttAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATACACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGATCCGGGTATTCTTCAGCAGAAAAAGCGGCACCCTTGCATTTCAGCCAGCCTGTTGTCGGAGTGGCTGAACGACACGGAACCCGGAACCCAACAGGTAATACAGACcctttcaccaaaccaaggt                                                                                                                                                                                                                  <  1:459219‑M2/228‑20 (MQ=255)
            ttAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAAAGccttctcccaaaccaaggt                                                                                                                                                                                                                  <  2:587815‑M2/228‑20 (MQ=255)
            ttAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCACCGGAACCGGGACACCACCAGGTAAGGCAGAGccttttcccaaaccaaggt                                                                                                                                                                                                                  <  1:440327‑M2/228‑20 (MQ=255)
            ttAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCAACGGAACCGGGCCACCAACAGGTAATGCAGAGccttctcccaaaccaaggt                                                                                                                                                                                                                  <  2:412492‑M2/228‑20 (MQ=255)
                    gggcgACCTGTATCAAGCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                                                                                                          >  2:464899‑M2/3‑201 (MQ=255)
                    gcgggtccttgatcaatcccccgCCCGTCATCCCAGCCACGAATAAACTCACCCCTGAAGTCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGTTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                                                                                                          >  2:459219‑M2/12‑201 (MQ=255)
                    aaccaaccttgATCAATCCCCGCCCCGTAACCCCAGCCACGAACAAACTCCCCACGTAATGCAGGCAATGTATTTGTCGGATAAGGCTTGGCCAGTTCCGGGTATTCTGCAGCAGAAAAAGCGGCACCAGTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcctgctcccaaaccaatgttttcgaga                                                                                                                                                                                                          >  1:234707‑M2/6‑201 (MQ=255)
                     agCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACCCCAACAGGGAATGCCGAGccttctcccaaaccaagggtttcggaaa                                                                                                                                                                                                         <  1:447517‑M2/228‑29 (MQ=255)
                     agCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGCAGGAGTGGCTGAAGGCCACGGAACCGGGACACCCACAGGTCATGCAGAGccttctcccaaaccaaggttttcgagag                                                                                                                                                                                                         <  2:483640‑M2/228‑29 (MQ=255)
                      gCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttgtcccaaaccaaggttttcagaggc                                                                                                                                                                                                        <  2:440880‑M2/228‑30 (MQ=255)
                         gtctgTATCAATCCCCCGGCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgt                                                                                                                                                                                                     >  2:80993‑M2/3‑196 (MQ=255)
                              tATCAATCCCCCGCCCGTCATCCCAGCCACGAAGAAACTCACCACGTAAATCAGGCAATTTATTTGGCGGATAAGCCTTTGCCAGTGCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                                                                                                                >  2:234931‑M2/1‑191 (MQ=255)
                              tATCAAACCCCCTCCCGTCACCCCAGTCACGAATAAACTCCCCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTGGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                                                                                                                >  1:18793‑M2/1‑191 (MQ=255)
                              gagcaatCCCCCGTCCGTCATCCCAGCCCCGAATACACTCACCACGTAAATCAGGCAATTTATTTGTCGGAAAAGCCTTTGCCAGTTCCGGGGATTCTTCAGCAGAAAAAGCGGCACCATTGCATTGCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                                                                                                                >  2:47721‑M2/4‑191 (MQ=255)
                                        ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcccagtgccat                                                                                                                                                                                       <  2:333796‑M2/227‑47 (MQ=255)
                                        ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcccagggccat                                                                                                                                                                                       <  2:331643‑M2/227‑47 (MQ=255)
                                        ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccat                                                                                                                                                                                       <  2:415275‑M2/227‑47 (MQ=255)
                                                                     ccccccgtAAAGCAGGCAATTTATTGGTCGGATAAGCCTGTGCCAGTTCCGGGTATTCTGCAGCAGAAAAAGCGGCCCCATTGCATTTCAGCCAGCCTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgc                                                                                                                                                         >  1:84709‑M2/3‑152 (MQ=255)
                                                                      accacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattctttc                                                                                                                                                         <  2:82633‑M2/227‑77 (MQ=255)
                                                                      accacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaaagccgttttctcagtgccatccgctttgatatcgcccaacgggttctttcg                                                                                                                                                        <  1:8750‑M2/228‑78 (MQ=255)
                                                                       ccacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTTTTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcgg                                                                                                                                                       >  1:415275‑M2/1‑150 (MQ=255)
                                                                        cacGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGGAATGCAGAGccttctcccaaaccaaggttttcgaaagccgtttgcacagtgccatccgatttgctatcgccaaacggattcttgcggc                                                                                                                                                      <  2:343186‑M2/228‑80 (MQ=255)
                                                                              aaTCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacactgccatccgctttgttatcgccaaacggattcttgcggcttaaca                                                                                                                                                <  1:25639‑M2/228‑86 (MQ=255)
                                                                                        tttatttGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccctccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcg                                                                                                                                      <  2:349285‑M2/228‑96 (MQ=255)
                                                                                         ttgtttcgcggagaagcCTTTGCAGGTGCCCGGTATTCCTCAGCAGAAAAAGCGGCACCAGTGCATTTAACCCAGACTGTTTGCGGAGTTGCTGAAGGCCACGGAACCGTGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaagctgattcttgcggcttaacagcagcgcgcga                                                                                                                                     >  1:80902‑M2/9‑132 (MQ=255)
                                                                                         ttatttCTCGGAGACGCCTTGGCCAGGTCCGTGTATTCTGCAGAAGAAAAAGCGGCCCCATTGCATTTCAGCCAGCCGGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgctaaacggattcttgcggcttaacagcagcgcgcga                                                                                                                                     >  1:80893‑M2/1‑132 (MQ=255)
                                                                                                  ggATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAATCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggt                                                                                                                             >  2:550554‑M2/1‑123 (MQ=255)
                                                                                                  ggATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGGGGCTGAAGGCCACGGAACCGGGACCCCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggt                                                                                                                             >  2:440327‑M2/1‑123 (MQ=255)
                                                                                                    aTAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGAGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgttttcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtccggaaa                                                                                                                           <  2:387859‑M2/227‑107 (MQ=255)
                                                                                                             tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcct                                                                                                                                                                                                                                  <  1:168497‑M2/115‑4 (MQ=255)
                                                                                                              gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaaccgcagcgagcgaagtgcggtaaggaactgaccg                                                                                                                <  2:555097‑M2/228‑118 (MQ=255)
                                                                                                              gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagagcggtaagtaacaggtc                                                                                                                 <  2:561105‑M2/227‑117 (MQ=255)
                                                                                                              gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcctt                                                                                                                                                                                                                                 >  2:168497‑M2/1‑111 (MQ=255)
                                                                                                                   ttCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAAAAGGTAATGCAGAGccttctcccaaaccaaggttttcgaaagccgtttgcacagtgccatccgatttgatatcgccaaacggaatctttcggcttaacagcaacgcgcgaagtggcggaaggaactggccgggccc                                                                                                           <  2:392755‑M2/228‑123 (MQ=255)
                                                                                                                      cGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATGTTAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                                                                                        <  2:95710/228‑1 (MQ=255)
                                                                                                                        ggTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacgtatccttgcggcttataccacacgcgcgaagttcggtaaggaaccggcgcgccgccccct                                                                                                      <  1:372428‑M2/228‑128 (MQ=255)
                                                                                                                               ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccag                                                                                               <  2:504111‑M2/228‑135 (MQ=255)
                                                                                                                                 gagcaaaAAAACGGGCCCCATTGCATTGCCGCCAGTCTGTTTGCGGGGTGGCTGAAGGCCAAGGGACCGGGAACCCAACAGTGAATGCAGGGccttctcccaaaccaaggttttcgagagccgtttgcacagggccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcccattctccagg                                                                                              >  1:187303‑M2/2‑92 (MQ=255)
                                                                                                                                            gCGGCACCATGGCATTTCAGCCCGCCTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccggttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggat                                                                                  >  1:188955‑M2/1‑81 (MQ=255)
                                                                                                                                                 aCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggatatttgcggcttaacagcacgcgctgacgtcggggaagaaaccgggcaggccgccccttctccaggctgccaccgggagcccc                                                                             <  1:21647‑M2/228‑153 (MQ=255)
                                                                                                                                                      tGCATTTCAGCCAGCCTGTTGGGCGGGGGGGCTAAGGCCCAGGAACCGGGACACCAACAGGTAATGCAGAGccttcccccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccacca                                                                        >  1:392755‑M2/1‑71 (MQ=255)
                                                                                                                                                         ttttcCGCCAGCCTGGTGGCGGGGGGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAGGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacg                                                                      >  1:82633‑M2/2‑68 (MQ=255)
                                                                                                                                                             cagccagcCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccctctccaggctggcaccggatgcccaccccccgctgcc                                                                 <  1:646862‑M2/228‑165 (MQ=255)
                                                                                                                                                                ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaaccgcaccgcgcgaagtgcggtaagtaactggtcgtgccgccccttctcccggctgacaccggaagcctccaccacgctgcaaaa                                                              <  1:183950‑M2/228‑168 (MQ=255)
                                                                                                                                                                             gggaATGGCGGAAGGCCCGGGAACCGGGACCCCAACCGGTAATGCAGAGccttctcccaaaccaagggtttcgcgagccgtttggacagggcgatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaa                                                  >  1:149177‑M2/2‑49 (MQ=255)
                                                                                                                                                                                    gCTGAAGGCCACGGAACCGGGCCACCACCGGGTAATGCCGAGcctttccccaaaccaaggttttcgagagccgtttgcacagtgccctccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtca                                           >  1:440880‑M2/1‑42 (MQ=255)
                                                                                                                                                                                       gAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaag                                        >  1:504111‑M2/1‑39 (MQ=255)
                                                                                                                                                                                              gcgGAACCGGGGCGCCAACCGGTAAGGGATATccttcccccaaaccagtgttttcgagatccgtttgcacagtgccagccgatgtgagagcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgaggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaattagtca                                  >  1:582982‑M2/2‑32 (MQ=255)
                                                                                                                                                                                                        gACCCCAACAGGGAAGGCCGGGccctctcccaaaccaaggttttcgagggccgtttgcccagtgccatccggtttgatagcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgacccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccaga                         >  1:331643‑M2/1‑22 (MQ=255)
                                                                                                                                                                                                        gACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaaagccgtttgcacagtgccctccgatttgatagcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttcaccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagat                        >  2:21647‑M2/1‑22 (MQ=255)
                                                                                                                                                                                                                acggtaATGCCGGGccttccccccaaccaaggtctccgagagccgtttgcacagggcccgccgattggatatcgccaagcggattcttgcggcttaacagcagcccgcgaagtgcggtaagtaactggtcgtgccgcccctcctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcag               >  1:93476‑M2/3‑14 (MQ=255)
                                                                                                                                                                                                                  ggTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggc             <  2:148679‑M2/228‑217 (MQ=255)
                                                                                                                                                                                                                      aTGGAGAGccttcccccaaaccaaggttttcgagcgccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgc         >  2:527853‑M2/1‑8 (MQ=255)
                                                                                                                                                                                                                           gagccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcgccggcaggcgtgccgtgc    <  2:326001‑M2/228‑226 (MQ=255)
                                                                                                                                                                                                                             gccttctcccaagccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgccggtctg  >  2:447517‑M2/1‑1 (MQ=255)
                                                                                                                                                                                                                             gccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccgga                                                                                   <  1:229355‑M2/147‑147 (MQ=255)
                                                                                                                                                                                                                             |                                                                                                                                                                                                                                   
ACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGC  >  NC_000913/1209382‑1209829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.