New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 458799	48 (0.630)	35 (0.470)	31/418	NT	42.6%	intergenic (+99/‑89)	clpX/lon	ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
	?	NC_000913	= 609347	NA (NA)					intergenic (+170/+112)	insL1/entD	IS186 transposase/phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex

TCGATACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/458567‑458799 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGCGATGGCTGGATTATGTCGTC  <  NC_000913/609347‑609112                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCGATACACTGTACGATCTGGCGTCCATGGAAGACGGCGAAAAAGTGGTTAACGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCAT                                                                                                                                                                                                                                            <  1:225157/235‑1    ATACCTTTTCCGGTCTGCGTTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAATCCGTTGGTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCT                                                                                                                                                                                                                                     <  2:169986/239‑1          TGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATTTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAAGTT‑GGGGGAAAAATCCCAAAAGCGCTAACTTA                                                                                                                                                                                                                               >  2:723895/1‑239          TGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTACCATACAATTAGTTAACAAAAAAGGGGGGCTTTTTTCTCCCCTTTAATTTTT‑CTCTCATTCTCGCCG‑TGGATGTGGGGGGAAACATCCCAAAAagccaaactt                                                                                                                                                                                                                                >  2:440374/1‑228          TGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGCAATTGATGGTCAAAGCACACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATTTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTA                                                                                                                                                                                                                               >  1:117186/1‑239           GTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAA                                                                                                                                                                                                                              <  1:110245/239‑1               GATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTTTCGGCGTTGAATGT‑GAGGGAAAAATCCCTTAAGCGCTAACTTAAGGGT                                                                                                                                                                                                                          >  1:24509/1‑239               GATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAAAAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCACCTTTAATTTTTCCTCT‑ATTCTCCGCGTTGAATGT‑GGGGGAACCATCCCATATGCGCTAACTTAAGGGT                                                                                                                                                                                                                          >  1:889158/1‑239                    GCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGGGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATTT‑GGGGGAAACCTCCCCTAAGCGCTAACTTAAGGGGTAAAC                                                                                                                                                                                                                     >  2:892463/1‑239                    GCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGGGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAAGTT‑GGGGGAAAAATCCCATAAGCGCTAACTTAAGtgaggaa                                                                                                                                                                                                                      >  2:204257/1‑231                                    GTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGA                                                                                                                                                                                                     <  1:270754/239‑1                                              TGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGCCCCCCCGGT                                                                                                                                                                                            >  2:279505/1‑238                                               GGTTATTGAGGAGTTGGTAATTGATGGTGAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCGCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGC                                                                                                                                                                                          <  2:526958/239‑1                                                  TATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCTTAACGGCTAACTTAAGGGTTGAACCATTCGAAGAATaggaaccctcgtggcccc                                                                                                                                                                                       >  2:78928/1‑221                                                                   ggGATGGTAAAAGCAAACTGTTGCTGATTTATGGCAAGCCGGAAGCGCAACCGACATCTGGTGAATAATTAAGCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTGAACTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCCTCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCG                                                                                                                                                                      <  2:392741/237‑1                                                                        GGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATACGACGCCTCGGTGCCTCGTTAAGAGGATGCCTCCCGT                                                                                                                                                                   >  1:685638/1‑237                                                                        GGTCAAACAAAACCGTTTGTGATTTATGGCAAGCCGGAAGCGCAACCGGGCACTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTC                                                                                                                                                                 <  2:824121/239‑1                                                                                 AAACCGGTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATT                                                                                                                                                          <  1:204257/237‑1                                                                                         ggtttTTTTTGGCCAGCCGGAAGCGCAAAAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTGAGCTCCCCTTTAATTTGTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACAGCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTA                                                                                                                                                <  2:753786/234‑1                                                                                         GCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTA                                                                                                                                                >  1:687749/1‑239                                                                                           ttATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCGAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGG                                                                                                                                              <  1:812331/237‑1                                                                                           TGATTTAAGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGG                                                                                                                                              <  1:279505/239‑1                                                                                             ATTTATGGCAAGGCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCT                                                                                                                                            <  1:78928/239‑1                                                                                                                                 GAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAG                                                                                                        <  1:850654/239‑1                                                                                                                                              TTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTTGCCCACGAATGGCCACCTGTAAGACCCAGATGACCA                                                                                           >  1:272098/1‑239                                                                                                                                               TCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCAT                                                                                          >  1:823478/1‑239                                                                                                                                                         TTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGAGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTTTCAGGGATACTTGCCCACGAATGGCCACCCGGAAGCCCCAAATGACACATTTGGTTAT                                                                                 >  2:358172/1‑238                                                                                                                                                          TAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTGCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTC                                                                               <  2:117186/239‑1                                                                                                                                                           AGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGCCGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTC                                                                               >  1:42922/1‑238                                                                                                                                                              TAACCAAAAAGGGGGGATTTTAACTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGGTGAATGG‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTC                                                                             <  1:440374/237‑1                                                                                                                                                                ACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACA                                                                         <  1:892463/239‑1                                                                                                                                                                ACCAAAAAGAGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCTTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACCGTCCCCCGACGTGCCACCTGTAAGCTCCAGATGCCCCTTTTTTTTATTCTCCACA                                                                         >  2:304182/1‑239                                                                                                                                                                 CCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACA                                                                         >  1:815953/1‑238                                                                                                                                                                           GGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAACACGATGCCTCGCGTGCTTCAATTGCGTTTTGTTGGCTGTCAGGGGAACTGTCCCACGAATGGCAACCTGTAGGTTCCAAATGACCATTTTTTTTTTTTTCCAAAAGGAGTCAGgt                                                              >  2:872878/1‑237                                                                                                                                                                                                 TTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTT                                        <  2:687749/239‑1                                                                                                                                                                                                      ccctttTTCTCTTCGTTGAATGT‑GGGGGAAACATCCCATACGCGTTAACTTAAGGGTTGAACCATCTGAATAATGCGACGCCTCGGTGCCTCGGTAAGACGATGCCGCGCGTTCGTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTGCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGG                                    <  2:24509/233‑1                                                                                                                                                                                                                     TTGAATGT‑GGGGGAAACACCCCATTAGCCTTCACTTAAGGGGTGAACCCTCTGAAGGAGTCGACGCCTCGGGTCCTCGTTAAGGCGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGC                      <  2:889158/238‑1                                                                                                                                                                                                                                       ATCCCCTAAGGGCTAACCTAAGGGTTGAACCCTCTTGAGAATGCGACGCCTCTGTGCCCCGTTAAGAGGATGCCTCGCGTTCATCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGCGATGGCTGGATTATGTCG    <  1:258603/239‑1                                                                                                                                                                                                                                       ATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGCTGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGTTTCCGGCACTTCTGGGGGGGAAATCCAGCGAGGGTCGGATTtgtgcg    >  2:653749/1‑233                                                                                                                                                                                                                                       ATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCCCAACGAGTTCGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATACAGAGATAGCTGGATTATG       >  2:57182/1‑236                                                                                                                                                                                                                                       ATCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGATGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGCTACTGTCCCACGAATGGCCACCTATAAGCTCCAGATGACCATTTTTGTTATTCTCCCCACAGAGTTAGTTCTTCTTTTGGGATCCGGCCCTTCTGGGGGGGAAATCCACGCAAGGCTGGATTATagag    >  2:540370/1‑235                                                                                                                                                                                                                                        TCCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGCGATGGCTGGATTATGTCGT   <  1:477513/239‑1                                                                                                                                                                                                                                         CCCATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACCACGAGTTAGTTCTTCTTTTCGGATCCGGCACTCCTGTGGGGGAAATCCACCGATGGCGGCATTATGcagtc  >  1:463932/1‑234                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCGATACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCT‑ATTCTCGGCGTTGAATGT‑GGGGGAAACATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/458567‑458799 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccATAAGCGCTAACTTAAGGGTTGAACCATCTGAAGAATGCGACGCCTCGGTGCCTCGTTAAGACGATGCCTCGCGTTCTTCAATTGCGTTTTGTAGGCTGTCAGGGATACTGTCCCACGAATGGCCACCTGTAAGCTCCAGATGACCATTTTTGTTATTCTCCACAACGAGTTAGTTCTTCTTTTCGGATCCGGCACTTCTGGGGGGGAAATCCAGCGATGGCTGGATTATGTCGTC  <  NC_000913/609347‑609112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.