New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 285211151 (0.670)4 (0.050) 4/410 NT 7.3% coding (250/273 nt) hypC hydrogenase maturation protein
?NC_000913 = 2852155 53 (0.720)coding (22/1122 nt) hypD hydrogenase maturation protein

TTCCCGGCCAGATCCGCACCATTGACGGCAACCAGGCGAAAGTCGACGTCTGCGGCATTCAGCGCGATGTCGATTTAACGTTAGTCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGT  >  NC_000913/2851875‑2852345
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                          
ttCCCGGCCAGATCCGCACCATTGACGGCAACCAGGCGAAAGTCGACGTCTGCGGCATTCAGCGCGATGTCGATTTAACGTTAGTCGGCAGCGGCGATGAAAACGGCCAGCCGCGCGTGGGCCAGGGGGTACTGGTACACGTTGGCTTTGCCATGAGCGAAATTAATGAGGCCGAGGCACGAGCAACCATCGCACCATTCCACAACATGTTTGGCGTTGAGCCGGAGGTCGGGGCGCgg                                                                                                                                                                                                                                          >  2:732467‑M1/1‑237 (MQ=255)
  cccGGCCAGATCCGCACCATTGACGGCAACCAGGCGAAAGTCGACGTCTGCGGCATTCAGCGCGATGTCGATTTAACGTTAGTCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCtgtt                                                                                                                                                                                                                                        >  1:887137/1‑239 (MQ=255)
           aTCCGCACCATTGACGGCAACCAGGCGAAAGTCGACGTCTGCGGCATTCAGCGCGATGTCGATTTAACGTTAGTCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCCTGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACCAAACATGTTTGACGTTGAGCCGGAGGTCGGCGCGCTGTTGTATGGCgc                                                                                                                                                                                                                               >  1:436135/1‑238 (MQ=255)
           aTCCGCACCATTGACGGCAACCAGGCGAAAGTCGACGTCTGCGGCATTCAGCGCGATGTCGATTTAACGTTAGTCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGGTGAGCCGGATGTAGGCGCGCTGTTGAATGGCGa                                                                                                                                                                                                                               >  1:549274/1‑239 (MQ=255)
            gcggCACCATGGCCGGCAACCGGGCGAAAGGCGTGGTCGGCGGCATTCAGCGGCATGGCGGTTTAACGTTGGGCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGGGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACAAGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCg                                                                                                                                                                                                                                <  2:200393/234‑1 (MQ=255)
                     ttGACGGCAACCAGGCGAAAGTCGACGTCTGCGGCATTCAGCGCGATGTCGATTTAACGTTAGTCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAg                                                                                                                                                                                                                              >  1:740574/1‑230 (MQ=255)
                     ttGACGGCAACCAGGCGAAAGTCGACGTCTGCGGCATTCAGCGCGATGTCGATTTAACGTTAGTCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAg                                                                                                                                                                                                                              <  2:740574/230‑1 (MQ=255)
                           gccaCCGGGGGACAGTTGACGGCTGCGGAATGCAGCGCGATTGCGATTTAAGCTATGTCGGACGCTGCGATTAAAACGGTCAGGCGCGTTTGGGCCAGTGGTTACTGGTACCTGTTGTCTTTGCCAAGTGCGTAATGAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGGTGAGCCGTATGTCGGAGCGCTGTTGTATGGCGAGGAAAAATAATGCGtt                                                                                                                                                                                                               <  2:688390/236‑1 (MQ=255)
                               ccAGGCGAAAGTCGACGTCTGCGGCATTCAGCGCGATGTCGATTTAACGTTAGTCGGCAGCTGCGCTGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGGGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGGCGGCGGGCTGTTGTTTTGCGAGGAAAAATAATGCGTTttgt                                                                                                                                                                                                           >  1:580467/1‑239 (MQ=255)
                               ccAGGCGAAAGTCGACGTCTGCGGCATTCAGCGCGATGTCGATTTAACGTTAGTCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAGACCATGTTTGTCGTTGAGCCGGATGACGGCCCGCGCTTGTATGGCGAGGAAAAATAATGCGTAttgt                                                                                                                                                                                                           >  1:412097/1‑239 (MQ=255)
                                cAGGCGAAAGTGGACGTGTGCGGAATTCCGGGCGAGGTCGATTTAACGTTGATCGGCAGCTGCGATGAAAACGGTCAGCCGCGGGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCgatattcatcaacaaaacgcattatttttcctcg                                                                                                                                                                                                          <  2:634375‑M1/239‑35 (MQ=255)
                                               gTCTGCGGAATTCAGCTCTTTGTGGATTTAAGGTTAGTCGGCAGGTTAGATGAAAACGGTCAGCCCGGCGTGGGCCAGTGGGTACTGGTACACGTTGGATTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCgcgc                                                                                                                                                                                            >  2:10305‑M2/1‑234 (MQ=255)
                                                 cTGCGGCATTCAGCGCGATGTCGATTTAACGTTAGTCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACCTGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGCGGAAAAAAAATGCGTTTTTTTGATGAATAACgcgcccc                                                                                                                                                                                         <  2:906786‑M2/239‑8 (MQ=255)
                                                       gtttgggggttatttCGATTTTATGTTAGTCGCCGGGTGGGATGTAATCGGTCAGCCGGCCGTGGGTCAGTGGGTACTGGTACACGTTGGTGTTTCCATGAGCGTAATTAGTGAAGGCGGAGCACGCGACACTCTCGACGCCTTGCAAATCATGTATGACGTTGAGCCGGATGTCGGCGCGCCGTTATATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAAc                                                                                                                                                                                    <  2:806/224‑1 (MQ=255)
                                                           ctggctcgttttcgtttAACGTTAGGCGGGAGCTGCGATGAAAACGGTGCGCCGCGTGTGGGCTAGTGGGTACTGGGACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTg                                                                                                                                                                               <  2:121512/225‑1 (MQ=255)
                                                                   tGTCGATTTAACGTTAGTCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCCCGACCCCTTACAAAACATTTTTGACGTTGAGCCGACAGTCGGCGCGCTGTTGGATGGAGAGGTAAAATAATGCGTTTTTTTTCTGAAATAGGCCCGCCGGaaaggggagggcggct                                                                                                                                                                       >  2:622347/1‑225 (MQ=255)
                                                                          ttAACGTTAGTCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAAGATCGCGCGCCGGAACAGGTGATGCAGTTAAtt                                                                                                                                                                   <  1:732467/236‑1 (MQ=255)
                                                                             acgttggtggggggtgggggtGAAAACGGTCAGCCGGGGGGGGGGCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGGGTAATTAATGAAGCCGAAGCACGCGACCCTCTCGACGCCTTAAAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGGTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCAt                                                                                                                                                             <  2:615093/219‑1 (MQ=255)
                                                                              cGTTAGTCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGGGATGCAGTTAATTGGACATc                                                                                                                                                            >  2:863297/1‑239 (MQ=255)
                                                                                  cgttggcagcttgagtgaaaagggtcagccgGGCGTGGGCCGGTGGGTAGGGGTACACGTTGGCTTGGGCATGAGCGTAATTGATGAAGCCGAAGCACGCGACACTCTCGAGGCGTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCgcgcgccgacatccggctcaacgtcaaacatgttttgtaa                                                                                                                                                        >  2:436135‑M2/16‑199 (MQ=255)
                                                                                      ggCAGATGCGATGAAAACGGTCAGCCGCGGGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGa                                                                                                                                                     <  1:367014/238‑1 (MQ=255)
                                                                                        cAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACg                                                                                                                                                  >  1:487770/1‑239 (MQ=255)
                                                                                                            cgggggcggTGGGCCGGTGGGGTCTGGTCAAGGTTGGGTTTGCCATGGGGTTAATTAAGGCAGGCGAAGCACCCGGCTCTCTCGGCGCTTTAAAAAACATGTTTGACGTTGAGCCGGAGGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTaca                                                                                                                              <  2:644333/231‑1 (MQ=255)
                                                                                                            aGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCGCGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGCGGCAAAATAATGCGTTTTGTTGATGAATATCGCGCCCCGGAACAGGGGATGAAGTTAATTGGGACTCTGCGCAAACGGGCTTcacaaacacattaa                                                                                                                               >  2:348370/1‑228 (MQ=255)
                                                                                                                                  aCTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCgatattcatcaacaaaacgcattatttttcctcgccatacaacagcg                                                                                                                                                                                             >  1:895012‑M1/1‑107 (MQ=255)
                                                                                                                                  aCTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGTACAGGTGATGCAGTTAATTGAGCATCTCGGCGAACGGGCTTCAAAACCCTTTTAAACCGCCGCACAcccccccgggat                                                                                                        >  2:907970/1‑230 (MQ=255)
                                                                                                                                  aCTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCCCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTCCGCGAACGTGCTTCACTTCTCTCTTCCACCGCCGACCGCCCTCTGCggtt                                                                                                        >  1:440599/1‑237 (MQ=255)
                                                                                                                                  aCTGGTACACGTTGGCTTTGCCATGAGCGGAATTAATGAAGCCGAAGCACGCGACACTCTCGAAGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCgatattcatcaacaaaacgcattatttttcctcgccatacaacagcg                                                                                                                                                                                             <  2:895012‑M1/154‑48 (MQ=255)
                                                                                                                                      gtaccggTTGGTTTTGCCATGGGAGTAATTAATGAAGCCGAAGACGGGGACCCTCTTGACGCGTTACAAAACATGTTTGACGTTGGGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATg                                                                                                    <  2:846839/233‑1 (MQ=255)
                                                                                                                                         cacGTTGGCTTTGCCATGGGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGaa                                                                                                 <  1:906786/239‑1 (MQ=255)
                                                                                                                                           cGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGGGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCctct                                                                                                              >  2:585010/1‑224 (MQ=255)
                                                                                                                                           cGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCctct                                                                                                              <  1:585010/224‑1 (MQ=255)
                                                                                                                                           cGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCACTCTTACACCTCCGAACGCCCTCTGCGGGTATTGGAAgt                                                                                               >  1:278799/1‑239 (MQ=255)
                                                                                                                                              tGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGGGCTTCACATCTCTCTTACCCCCCCGAACCCCCCCTGCGGTTTAAGGaaagggg                                                                                            >  2:789952/1‑234 (MQ=255)
                                                                                                                                                  tttGCCAGGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTgg                                                                                         <  1:736026/238‑1 (MQ=255)
                                                                                                                                                    tGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGGGATGCAGTTAATTGAGCATTTGCCCGAACGGGCTTCCCATCCCTCTTAAACCGCCAGACGCCCCCTCGGGATTTTGGAAGGGGGTGgggg                                                                                      >  2:804054/1‑239 (MQ=255)
                                                                                                                                                           aGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTAGGGAAGTGTGGGGCGGTccaac                                                                                >  2:869698/1‑234 (MQ=255)
                                                                                                                                                                aattaatGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGAt                                                                                                                                                                             <  2:98095/140‑1 (MQ=255)
                                                                                                                                                                aattaatGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGAt                                                                                                                                                                             >  1:98095/1‑140 (MQ=255)
                                                                                                                                                                aattaatGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCATACCCACg                                                                           <  1:804054/238‑1 (MQ=255)
                                                                                                                                                                aattaatGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGGGATGCAGTTAATTGAGCATCTGCGGGAACGGGCTTCCCATCCCTCTTACACCGCCCACAGCCCTCGGCGGCGTTTGGAAGGGGGGGGCGGTCAATCCCAccg                                                                          >  2:889996/1‑237 (MQ=255)
                                                                                                                                                                 attaatGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCATACCCACGCt                                                                         <  1:863297/239‑1 (MQ=255)
                                                                                                                                                                  ttaatGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTAAACTGCCGAACGCCCTCTGCGGGTTATGGAAGTGTGTGGCGGTCATACCCCCGCtt                                                                        >  1:539675/1‑238 (MQ=255)
                                                                                                                                                                          gCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGTGGATGAAGTTAATTGCGCCTCTCCGCGAACGTGCTTCACATCTCTCTTACCCCGCCGAACGCCCTCTGCGGATTATGGAAGAGGTTGGCGGTACCACCAACCCCATCTTTaaa                                                                >  2:434442/1‑239 (MQ=255)
                                                                                                                                                                                  aCGGGACACTCTCGACGCATTACAAAACCTTTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGTAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCGCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCATACCCACGCTATCTTTAAATTCGGCCt                                                        <  2:539675/239‑1 (MQ=255)
                                                                                                                                                                                                     ttACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCgatattcatcaacaaaacgcattatttttcctcgccatacaacagcgcgccgacatccggctcaacgtcaaacatgttttgtaacgcctcgagagtgtcgcgtgcttcggcttcatcaattacgctcatgcccaagccaacgtgtacccctacccaccggcccacgcccggctgacccttttcactcaagctgccaacg                                     >  2:436135‑M1/1‑40 (MQ=255)
                                                                                                                                                                                                     ttACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACAGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCACACCCCCCCGCTCTTTAAATTCTGCCCCACCCAGTTCATCCCGGaa                                     >  2:175560/1‑239 (MQ=255)
                                                                                                                                                                                                             tgtttttGAGTTTGTGCGGGGTGTGGGGGCGCTGTTGGAGGGGGAGGAAAAATAATGGGTGTGGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTCTGGAAGTGTGTGGCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGt                                <  2:364754/232‑1 (MQ=255)
                                                                                                                                                                                                              aTGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGGATGGAGAAGAAAAATAAGGCGTTTTGTTGATGAATATCGCGGGCCGGAACAGGTGAGTCAGTTAATGGAGCATCTGCGCTAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAg                            <  1:181973/239‑1 (MQ=255)
                                                                                                                                                                                                                gTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGa                                                                                                                                                                                      >  2:414835/1‑83 (MQ=255)
                                                                                                                                                                                                                gTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGa                                                                                                                                                                                      <  1:414835/83‑1 (MQ=255)
                                                                                                                                                                                                                gTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCCCCGAACGCCCTCTGCGGATTATGGAAGTGTGGGGCGGCCATACCCCCGCCATCTTTAAATTCAGCGCCGACCAGGTAAGTCCGGAAAAAGGTGAGtt                          >  2:204517/1‑239 (MQ=255)
                                                                                                                                                                                                                  ttGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGtttt                        >  1:754215/1‑238 (MQ=255)
                                                                                                                                                                                                                     ccggtggggcggtgggcGGCGCGCTGTTGTCTTGCGAGGAAAAATAATGCGTTTTGTTGATTAATCTGGGGCGCCGGAACAGGTGATTCAGTTAAGTGAGCATCTGGGCGAACGTGCTTACCATCTCGCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGACCCGTTACTGCCGGAAAACGTTGAGTTTATcc                     <  2:781687/223‑1 (MQ=255)
                                                                                                                                                                                                                     agtgtgggcgggttttCGGGGCGCTTTTGTATGGGGAGGAAAAATAATGCTTTTTGGGGATGAATAACGCGCGCCGGAACAAGTGATGCAGTTAATTGAGCATCTGCGCGGACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATcc                     <  2:419020/224‑1 (MQ=255)
                                                                                                                                                                                                                      cGTTGAGCCGGATGGCGGCGGGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATcc                     <  1:789952/238‑1 (MQ=255)
                                                                                                                                                                                                                       gtggAGCCGGATGTCGGCGCGCTGTTGGATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCa                    <  1:622347/235‑1 (MQ=255)
                                                                                                                                                                                                                       gTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGGGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCa                    <  1:907970/238‑1 (MQ=255)
                                                                                                                                                                                                                       gTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTTTGGAAGGGTGTGGCGGGCTCACCCCCGCTATCTTCTAATTCGGCCCCGCCCAGTTAATGCCGGAAAACGATGAGtttcatcct                   >  1:364754/1‑233 (MQ=255)
                                                                                                                                                                                                                                     gggCGCGCTTTTTTAAGGGGAGGAAAAATAAGGGGTTTTGTTTATGAATTACGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGGGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGccc     <  2:487770/238‑1 (MQ=255)
                                                                                                                                                                                                                                      ggggcgcgttattcatcaaaaaaacgcattttttttccgcgccatacaacagcgcgccgacatccggctcaacgtcaaacaggttttgtaaggcgtcgagagtgtcgcgtgcttcggcttcattaattacgctcatggcaaagccaacgtgtaccagtacccactggcccacgcgcggctgaccgttttcatcgcagctgccgactaacgttaaatcgacatcgcgctgaatgccgcag    <  2:906786‑M1/236‑233 (MQ=255)
                                                                                                                                                                                                                                         gcgcgatattcatcaacaaaacgcattatttttcctcgccatacaacagcgcgccgacatccggctcaacgtcaaacatgttttgtaaggcgtcgagagtgtcgcgtgcttcggcttcattaattacgctcatggcaaatccaacgtgtaccagtacccactggcccacgccgggctgaccgttttcatctaacctgccgactaaccttaaatccacaaagagctgaattccgcagac  >  2:10305‑M1/1‑4 (MQ=255)
                                                                                                                                                                                                                                          cgcTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCgcgcgccgacatccggctcaacgtcaaacatgttttgtaaggcttcgagagtgtcgcgtgcttcggcttcattaattccgctcatggcaaagccaacgtgtaccagt                                                                                     <  2:895012‑M2/154‑108 (MQ=255)
                                                                                                                                                                                                                                          cgcTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCgcgcgccgacatccggctcaacgtcaaacatgttttgtaaggcgtcgagagtgtcgcgtgcttcggcttcattaattacgctcatggcaaagccaacgtgtaccagt                                                                                     >  1:895012‑M2/1‑47 (MQ=255)
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                          
TTCCCGGCCAGATCCGCACCATTGACGGCAACCAGGCGAAAGTCGACGTCTGCGGCATTCAGCGCGATGTCGATTTAACGTTAGTCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGT  >  NC_000913/2851875‑2852345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.