New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 458799	3 (0.040)	66 (0.810)	54/276	0.4	95.8%	intergenic (+99/‑89)	clpX/lon	ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
	?	NC_000913	= 609347	NA (NA)					intergenic (+170/+112)	insL1/entD	IS186 transposase/phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex

GAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTAT  >  NC_000913/609211‑609488                                                                                                                                          |                                                                                                                                              gAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTGCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAga                                                                                                                                         >  2:680554/1‑142 (MQ=11)  aGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGTCATCGTCTTACCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGgtagta                                                                                                                                        <  2:55060/143‑1 (MQ=9)    cTTACAGGTGGCAATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAAt                                                                                                                                      <  2:1419780/143‑1 (MQ=18)          ggTGGCCATTGGTGGGCAAGTAGTCCTGACAGCCTACAAAACGCGATTGAAGAACGCGATGCATCGTCTTAACGAGGCACCGCGGCGTCGCATTCTTCAGCTGG‑TCTTCCCTGTATCTGAGCGCTTACGGGAGTAATCCCCGc                                                                                                                                <  1:314050/143‑1 (MQ=2)                  ttCGTGGGAGAGTATCCCTCACAGCCTACAGAGCGCAATGGAAGATCGCGAGGCATCGTCTTACCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCgg                                                                                                                        <  1:1058653/143‑1 (MQ=14)                  ttCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCgg                                                                                                                        <  1:460902/143‑1 (MQ=255)                  ttCGTGGGACAGTATCCCTGACAGCCTAAAAAACGCAATTGACGAACGCGATGCATCGTCTTAACGAGGCACAGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑GAAGTTAGCGCTTATGGGAGTAATCTCCGCATATCCgg                                                                                                                        >  2:308835/1‑143 (MQ=14)                    cGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGtt                                                                                                                      <  2:9284/143‑1 (MQ=255)                      tGGGACAGTATCCCTGACAGCCTACAAAACGAAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCAGTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTgt                                                                                                                    >  1:513425/1‑143 (MQ=255)                       ggtaCAGTTTCCCTGACAGCCTACAACACGCAATTGAAGAACGCGAGGCATCGTCTTAACCAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTgtc                                                                                                                   <  2:1173169/140‑1 (MQ=255)                        ggACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGCCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAATAATCCCCGCATATCCGGttcgca                                                                                                                  >  1:196161/1‑139 (MQ=255)                          aCAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACACT‑TAAGTTAGCGCTTATGGGAGGAATCCCCGCATAGCCGGTGgacagg                                                                                                                >  2:223902/1‑143 (MQ=14)                            aGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTgtcaggtc                                                                                                              >  2:1258713/1‑143 (MQ=255)                             gTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGACATCCCCGCATATCCGGTTgtcagcaca                                                                                                             >  1:988881/1‑139 (MQ=255)                               aTCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCACTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCCTATGGGCGTAATCCCCGCATATCCGGTTGtcaggtcagg                                                                                                           >  2:373070/1‑143 (MQ=255)                                tCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGa                                                                                                          <  2:315909/143‑1 (MQ=255)                                   cTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATgg                                                                                                       >  1:835795/1‑143 (MQ=255)                                   cTGAAAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGCCAGGTCAGGATga                                                                                                       >  2:1223669/1‑142 (MQ=255)                                      aCAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTaa                                                                                                    <  1:1090860/143‑1 (MQ=255)                                            tACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTa                                                                                                     <  2:1171692/136‑1 (MQ=255)                                            tACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTa                                                                                                     >  1:1171692/1‑136 (MQ=255)                                            tACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCAcc                                                                                              >  2:881633/1‑143 (MQ=255)                                               aaaaCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGc                                                                                           >  2:44065/1‑143 (MQ=255)                                                aaaCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATACTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGACAGGACGGTAAGGCACCTGCt                                                                                          >  1:33847/1‑143 (MQ=255)                                                    gCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTCGGCAGGTCAGGATGGTAAGGCACCTGCTTTac                                                                                      >  1:119358/1‑143 (MQ=255)                                                        ttGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGCTTGTCCGGCCCGCATTGTACGGCACCTGCTTTgcacgc                                                                                  >  2:1073291/1‑141 (MQ=17)                                                              aaCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGccc                                                                            >  1:808776/1‑143 (MQ=255)                                                                  cgAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTgg                                                                        <  2:148431/143‑1 (MQ=255)                                                                   gAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCACCGCATATCCGGTTGTCAGGTCAGGGTGGTAAGGCACCTGCTTTACACTTTCGCACGTTGt                                                                       >  1:329478/1‑143 (MQ=255)                                                                        aTCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAGGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTg                                                                  >  2:445982/1‑143 (MQ=255)                                                                        aTCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTCTACACTTTCGCCCGTGCTCAggg                                                                  >  1:1256616/1‑141 (MQ=255)                                                                          cGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGAATATCCGGGTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTGAGTGAt                                                                >  1:1029617/1‑143 (MQ=255)                                                                              ttAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCt                                                            >  2:358719/1‑143 (MQ=255)                                                                               tAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATTGAAGTGATCCCCGCATATCCGGTTGTCAGCGGCGGATGGTAAGGCCCACGCTGTACACTGTGACCCGGGGGCAGTgtaggcag                                                           >  1:130274/1‑136 (MQ=12)                                                                               tAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCACGTGGTCAGTGATGGCTg                                                           >  2:63777/1‑143 (MQ=255)                                                                                aaCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGc                                                          >  2:719452/1‑143 (MQ=255)                                                                                aaCGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCAT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATCTGCGGTTGTCAGGTCAGGATGGTAAGGCACGTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGc                                                          >  2:711209/1‑143 (MQ=255)                                                                                aaCGAGGCACCGAGGCGTCGCATGCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGTGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGc                                                          <  2:649521/143‑1 (MQ=255)                                                                                  cGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCCTATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGCTGGCTGCgg                                                        >  1:1048222/1‑143 (MQ=255)                                                                                            ttgcttcgtgttcttcATAGGGTTCAACCCT‑GATGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCCGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTa                                              <  1:534150/133‑1 (MQ=255)                                                                                                gTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCACCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGAGGTCAGTGATGGCTGCGGGCGAATGGTACCAg                                          >  1:926285/1‑143 (MQ=255)                                                                                                 tCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGCCGGATCGTACCCGa                                         >  2:522481/1‑143 (MQ=255)                                                                                                   gCATTCTTCAGATGGTTCAACCCT‑TACGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGCtg                                       >  2:276742/1‑143 (MQ=255)                                                                                                     agtcttcAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAtgtt                                     <  1:84048/141‑1 (MQ=255)                                                                                                          tcAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCaa                                <  2:835795/143‑1 (MQ=255)                                                                                                          tcAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCaa                                <  2:261082/143‑1 (MQ=255)                                                                                                            aGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAAtt                              >  2:1223871/1‑143 (MQ=255)                                                                                                              aTGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGCTGGTAAGGCACCTGATTTACACTTTCGCCCGTGGTAAGTGATGGCTGCCGGCGAAACGTAACAGCTGTTGTCAAATaa                            >  1:1093743/1‑143 (MQ=38)                                                                                                              aTGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGGGATGGCTGCGGGCGAATCGTATCAGATGTTGTGAAGTag                            >  1:47497/1‑142 (MQ=255)                                                                                                                ggTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTACGCCACATGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATc                          <  2:1297149/143‑1 (MQ=255)                                                                                                                  ttCAACCCT‑TTATTTGGCGCTTAGTGGAGTAATCCCCGCATATCCGTTTTTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGTGGGCGAATCGTACCAGATGTTGTCAATTAATCgt                        <  1:500145/143‑1 (MQ=255)                                                                                                                    cAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTGGTCAATTCATCgtgt                      >  2:256118/1‑143 (MQ=255)                                                                                                                      aCCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTg                    <  1:1143407/143‑1 (MQ=255)                                                                                                                      aCCCT‑TAAGTTAGCGCTTATAGGAGTAATCCCCGCATATCCGGTTGTCAGATCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGAGGTCAGTGATGGCTGCGGGCAAATCGTACCAGATGTTGTCAATTAAtagaggtg                    >  1:377639/1‑136 (MQ=255)                                                                                                                       cccT‑GAAGTTAGGGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTgg                   <  1:739789/143‑1 (MQ=255)                                                                                                                          t‑tAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCACTTAATCGTGTTGGcac                >  2:1236167/1‑143 (MQ=255)                                                                                                                             aaGTTAGGGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAg              <  1:551077/143‑1 (MQ=255)                                                                                                                                ttAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCAGCGTTACACTTTCGCCCGTGGTCAGTGGTGGCTGCGGGCGAAGCGTACGAGATGTTGTCAGTGAATCGTGTTGGGACAGCGt           >  2:756643/1‑143 (MQ=255)                                                                                                                                   gcgcTTATGGTAGTGACTCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTGCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTAt        <  1:769377/143‑1 (MQ=255)                                                                                                                                     gcTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCTGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGa      <  2:1314401/143‑1 (MQ=255)                                                                                                                                     gcTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGACGGCTGCGGGCGAATCCTACCAGCTGTTGTCAATTAATCGGGTCGGCACGACGTTATGa      >  1:308181/1‑143 (MQ=255)                                                                                                                                     gcTTATGGGAGTAAGCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGa      <  1:1156588/143‑1 (MQ=255)                                                                                                                                         aTGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTAt  >  1:41428/1‑143 (MQ=255)                                                                                                                                         aTGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTAt  <  2:513425/143‑1 (MQ=255)                                                                                                                                          |                                                                                                                                              GAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCT‑TAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTAT  >  NC_000913/609211‑609488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.