New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 258675NA (NA)55 (1.110) 47/284 0.0 100% intergenic (+776/‑1) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913 1309405 = 0 (0.000)coding (865/1254 nt) kch voltage‑gated potassium channel

TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/258538‑258675
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATCTTTAC  >  NC_000913/1309405‑1309545
                                                                                                                                                                                                                                                                                       
TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACCGCTGATAGAACCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTCAATCCGTACGCTGGCAGCATCCCCCGCCT                                                                                                                                          >  2:300484/1‑143
  ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAA                                                                                                                                        <  1:745113/143‑1
       CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTT                                                                                                                                   >  1:140720/1‑143
        GGCGGTGGTTTTGCCGTTAGGGAGCAGCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACTGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTG                                                                                                                                  <  2:422258/143‑1
        GGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTG                                                                                                                                  <  1:138082/143‑1
             TGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCGGTACGGTGGCAGCATCACCCGCCTAGGCGGTGCTCAc                                                                                                                             >  1:819721/1‑142
                TTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTT                                                                                                                          >  1:139843/1‑143
                    GCCGCTAAGCACTAGCCCGTCAGTAGCTGAACAGGAGAGACATCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACCCCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTT                                                                                                                      <  2:13074/143‑1
                      CGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGCCAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGA                                                                                                                    >  1:818349/1‑143
                        cTACGCACCGCCCCGTGAGGAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCGTCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATA                                                                                                                  <  1:87520/142‑1
                        TTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATA                                                                                                                  <  2:501034/143‑1
                                 ACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCCTCCTCA                                                                                                         >  2:777834/1‑143
                                     CGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATAACCCGCCTAAGCGTTGCTCAAGTTGCCTGATATCCTCTTCCGGCc                                                                                                     >  1:95118/1‑142
                                       TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAG                                                                                                   <  1:282960/143‑1
                                        gAGTAGCTGCACAGGAGCGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCCTCATACACTAACTCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGT                                                                                                  <  2:769993/142‑1
                                         AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTg                                                                                                 >  1:792557/1‑142
                                          GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAGGTTG                                                                                                >  1:488374/1‑143
                                               TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAATTGCTTGATATCACCTTCAGGCACGTTGCTCAT                                                                                           >  2:811336/1‑143
                                                      GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTT                                                                                    >  2:426191/1‑143
                                                           ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTT                                                                               >  1:548480/1‑143
                                                             AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTT                                                                             >  2:479524/1‑143
                                                             AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTT                                                                             <  1:438793/143‑1
                                                               CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGT                                                                           >  2:315935/1‑143
                                                                TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTCCGTCTTGTC                                                                          >  2:551441/1‑143
                                                                 cactaacctAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCC                                                                         <  2:766071/134‑1
                                                                      AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCACGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGGTACGTTTTGTCCtcctt                                                                    >  1:734781/1‑138
                                                                          agcAGCCACTGGTGCACCTCAAAAACACCATCATACACTCACGCGCTCGGTTGGCGGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATT                                                                <  2:455457/140‑1
                                                                                 actgtgGCACCTCAAAAACACCATCATACACTAATTCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGC                                                         <  2:436689/137‑1
                                                                                 ACTGGAGCACCTCAAAAACACCATCATACACTGAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCCAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGC                                                         >  2:818913/1‑143
                                                                                       ggccgggatagACATCATCATACACGAGATCAGTAAGGTGGCAGCATCACCCGCCTAAGCGTTGCTGAAGTTGCTTGGTATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATC                                                   <  2:745106/132‑1
                                                                                       GCACCTCTAATACACCATCATGGAGTGGGTCAGCAAGTGGGCAGCATCGCCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATC                                                   <  1:28053/143‑1
                                                                                       GCACCTCAAAAAGACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATC                                                   <  1:436596/143‑1
                                                                                           CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGACTTGATTCAGctcacggagcgtct                                               >  1:169314/1‑129
                                                                                            TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCAGCGTTGATTCAGTTGCAGGATCGTCTT                                              >  2:278279/1‑143
                                                                                             CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTG                                             >  1:696009/1‑143
                                                                                               AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATCTTAGCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGAT                                           <  2:563377/143‑1
                                                                                                gAACACCAGCATACACTAACTCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATG                                          <  2:593720/142‑1
                                                                                                       ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAA                                   <  1:765787/143‑1
                                                                                                            ACACTAAGTCAGTAAGTTGGCAGCATCACCCGGCTAACCGTTGCGCAATGTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAA                              <  2:295262/143‑1
                                                                                                              ACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGCATCGACTG                            >  2:736904/1‑143
                                                                                                              ACTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGACTG                            >  2:854332/1‑143
                                                                                                               CTAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTGGATATCATCTTCAGGCAAGTTGCTGATAACTGTTACGTTTTGTCCGCGGTGGTTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGT                           >  1:535318/1‑143
                                                                                                                TAAATCAGTAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGGATCGAATGTC                          >  2:697735/1‑143
                                                                                                                      attcagtgcGCACCATCACCCGCCTAAGCGTTGCTCAACTTGCTTGACATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGCTTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAA                    <  1:56199/134‑1
                                                                                                                       ttgactcgtCAGCATCACCCGCCTAAGCGTTGCTCAATTTGCGTTATATCATCTTCAGTCAAGTTTCTCATAACCGGTACGTTTTGTCCGCGTTGATTCAGTTGCAGTATCGTATTGATGGCGAGAATCGAATGTCCGCAAAC                   <  2:95084/134‑1
                                                                                                                        TAAGTTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGCTGGCGCGAATCGACTCTCCGCAACCA                  >  2:816054/1‑143
                                                                                                                          AGTTGGCAGCAACACCCGCCGAAGCGGTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAAT                <  1:25836/143‑1
                                                                                                                            TTGGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAA              <  1:479524/143‑1
                                                                                                                              GGCAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAA            <  1:76041/143‑1
                                                                                                                               GCATCATCCCCCGCCTAAGCGTTGCTCAAGTTGCTTGACATCATCTTCAGGCAAGTTGCTGATAACCGTCACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAAT           <  1:63538/143‑1
                                                                                                                                CAGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGACTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCCCCAACAATAAAATG          >  2:347899/1‑143
                                                                                                                                 AGCATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTGTTGTCCGCGTTGCTTCGGTTGCCGGATCGTATTGATGGCGAGAATCGACTGTCCGCACACCATAAAATGA         >  1:165515/1‑143
                                                                                                                                   tATCACCCGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATC       <  2:350634/142‑1
                                                                                                                                     TCACCCGACTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTACGCGTTGATTGAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATCTT     <  1:300484/143‑1
                                                                                                                                        CCCGCCTAAGCGTTGCTAAAGTTGCGTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATCTTTAC  >  2:106164/1‑143
                                                                                                                                                                                                                                                                                       
TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/258538‑258675
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCCTAAGCGTTGCTCAAGTTGCTTGATATCATCTTCAGGCAAGTTGCTGATAACCGTTACGTTTTGTCCGCGTTGATTCAGTTGCAGGATCGTATTGATGGCGAGAATCGAATGTCCGCAAACAATAAAATGATCTTTAC  >  NC_000913/1309405‑1309545

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.