New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12078055 (0.100)33 (0.750) 30/252 0.4 84.2% coding (305/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 = 1209602 8 (0.180)pseudogene (18/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

TGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGA  >  NC_000913/1207665‑1207947
                                                                                                                                            |                                                                                                                                              
ttacgttgtagatctgtgttctggtcatttgttgataagcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAg                                                                                                                                              >  1:663563‑M1/126‑143 (MQ=255)
      ccTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcat                                                                                                                                        <  1:509126‑M1/143‑9 (MQ=255)
         ggAGAAGGGGCGGCACGACCAGTTACTTGCCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattac                                                                                                                                     <  2:856487‑M1/143‑12 (MQ=255)
              tgtggtctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                                >  1:147213‑M1/112‑143 (MQ=255)
              aGGGGCGGCACGACAAGTTACGGGCCGCACTGCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                                <  1:661034/143‑1 (MQ=21)
                tgttctggttatttcttgatacgtgtacatagccaataagcatgttaaattccccttgtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagc                                                                                                                              >  2:434090‑M1/110‑143 (MQ=255)
                  gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtg                                                                                                                            >  2:695230‑M1/1‑123 (MQ=255)
                     tggtcattttttgatccgcgtacatagccaataagcatgttaattccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                                         >  2:250954‑M1/105‑143 (MQ=255)
                     tggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCACAACTCAATACAGCAACgg                                                                                                                         <  2:585441‑M1/39‑1 (MQ=255)
                     tggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                                         >  1:594418‑M1/105‑143 (MQ=255)
                      ctcgtccagtttCTCTCCGCACTTCGCTCGCTGCTGTTAAGCCGCAAGAATCCGTTTTGCGATATCAATTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGTAGGctctgcattacctgttggtgtccc                                                                                                                        <  2:712543‑M1/138‑25 (MQ=255)
                      cACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtccc                                                                                                                        <  1:185119‑M1/143‑25 (MQ=255)
                       gtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt                                                                                                                       <  1:466558‑M1/41‑1 (MQ=255)
                       caccacagttaCTGACCGCACTTCGCGCGCTGCTGTGAAGCCGCAAGAATCCGTTTGGCGATATCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccg                                                                                                                       <  2:259594‑M1/138‑26 (MQ=255)
                       aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGCTGGCACTGTGCAAACGGCTCTCGAAAACCATGGTTTGGGAGAAGGctctgcattaccggttggtgtcccg                                                                                                                       >  1:205726‑M1/1‑118 (MQ=255)
                            gtgttgattcgggtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattgtcataaacgGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAtt                                                                                                                  >  2:632029‑M1/98‑143 (MQ=255)
                              gttgatacgcgtacatagccaataagcatgttaaatcgccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCCACATTAg                                                                                                                <  2:589266‑M1/48‑1 (MQ=255)
                              gTTCCTTACCGCACTCCGCGCGCTGCTGTTACGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTATGGGAGAAGGctctgcattacctgttggtgtcccggttccgt                                                                                                                <  1:374324‑M1/143‑33 (MQ=255)
                               ttacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg                                                                                                               <  1:830564‑M1/143‑34 (MQ=255)
                               cggagactcgcacagagccaataagcatgttaaatccccctggtaaacgcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                                               >  2:451822‑M1/95‑143 (MQ=255)
                                  atacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACg                                                                                                            >  2:191282‑M1/92‑143 (MQ=255)
                                   ttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAGTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTAGGTTCGGGAGAAGGctctgcattacctgatggcgtcccggttccgtggcct                                                                                                           >  2:17083‑M1/1‑106 (MQ=255)
                                    acgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACCTTAGGACGCa                                                                                                          <  1:649585‑M1/54‑1 (MQ=255)
                                      ccGTACTGCGCGCGCTGCTGTTAGGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca                                                                                                        <  2:52405‑M1/143‑41 (MQ=255)
                                       cgtacatagccaataagcatgttaaatccccctggtaaaagcaggtatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCg                                                                                                       >  1:326597‑M1/87‑143 (MQ=255)
                                       cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcag                                                                                                       >  1:711847‑M1/1‑102 (MQ=255)
                                        gCACTGCGCGCGCTGCTGTAACAATGGAAGATGCCGTATGACGATAATTAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc                                                                                                      <  1:116649‑M1/143‑43 (MQ=255)
                                            gcggggcgcTGCAGTGACGCCGCAAGAATCCGTGTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                                  <  2:291657/138‑1 (MQ=25)
                                              ttctaatttgtatgttaaatccccctggtaaaagcaggaatgatgccatgtgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                                                                                >  1:661850‑M1/80‑143 (MQ=255)
                                              atccagtacgcatgttagatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                                                                                >  2:462881‑M1/80‑143 (MQ=255)
                                               gtcaataagcattgtgaatccccctggtaaaagcaggaatggtgccatttgcttgttatttcttcattttcataatcgTTTGTTTGGTAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                                               >  2:341992‑M1/79‑143 (MQ=255)
                                               ggcaataagcatgttccagtcgtctggtaaaagccggaatgatgccatttggttgttagtgcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                                               >  2:173478‑M1/79‑143 (MQ=255)
                                               gccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                                               >  2:434241‑M1/79‑143 (MQ=255)
                                                 gcgcGGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcc                                                                                             <  2:114353‑M1/143‑52 (MQ=255)
                                                 caataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcatattcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                                                                             <  1:457446‑M1/67‑1 (MQ=255)
                                                   ataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCta                                                                                           <  2:707125‑M1/69‑1 (MQ=255)
                                                     tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAAAGGCTCTCGAAAACCTTGGTCTGGGAGAAGGAGCAAAACCCAATGCAGCAACGGCTACCACAAGCCGCACCggaatgattactaaa                                                                                         >  2:663398/1‑130 (MQ=17)
                                                     tgctgTGAAGTCGCAGGATTCTGTTGGGCGATATCAAATCGGATGGGAGTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGCAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaaca                                                                                         <  2:109931‑M1/143‑56 (MQ=255)
                                                        catgttaactcccccttgtaaacgctggacggatgccatttgcgtgttatttcgtcattctcataaacgTTGGTTTGGGAGAATGAGCAACACTCTATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCg                                                                                      >  2:58545‑M1/70‑143 (MQ=255)
                                                         acgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAAGGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                                                                                     >  1:306929‑M1/69‑143 (MQ=255)
                                                          ttAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctg                                                                                    >  2:235491‑M1/1‑83 (MQ=255)
                                                                cGCAAGACTGCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttcggtcaccatcacccactccgccaacaggctggctgaa                                                                              <  2:613018‑M1/143‑67 (MQ=255)
                                                                cGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGTTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaa                                                                              <  2:624635‑M1/143‑67 (MQ=255)
                                                                atccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                                                              <  2:618836‑M1/82‑1 (MQ=255)
                                                                 tccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTCtgccggttgtgctt                                                                             <  1:52290‑M1/83‑7 (MQ=255)
                                                                 gCAAAAAGCCGTCGGGAGATAGCAAAGCGGAGGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaa                                                                             <  1:161776‑M1/143‑68 (MQ=255)
                                                                    ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATgggt                                                                          <  2:88494‑M1/86‑1 (MQ=255)
                                                                     gAATCCGGTTGGCGATAGCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggtgccgtggccttcagccactccgccaacaggctggctgaaatgca                                                                         <  1:260354‑M1/143‑72 (MQ=255)
                                                                     cctggtttacggcggtatggtgctatttggttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATCAGGACGCACCGGTTTCAGAGCTATACCGGTTATGATtggtg                                                                         >  2:737675‑M1/57‑143 (MQ=255)
                                                                      aaTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaa                                                                        <  1:450247‑M1/143‑73 (MQ=255)
                                                                        tCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccctcagccactccgccaacaggccgggtggaagacaaca                                                                      >  2:500733‑M1/1‑69 (MQ=255)
                                                                        ggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTCTGCTTGGTGGTa                                                                      <  1:832205‑M1/90‑1 (MQ=255)
                                                                        ggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGattggtggga                                                                      <  1:373971‑M1/90‑3 (MQ=255)
                                                                        gctaaaagcaggaatgatgccctttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCATCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTa                                                                      >  1:769478‑M1/54‑143 (MQ=255)
                                                                                 aggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                             >  1:370365‑M1/45‑143 (MQ=255)
                                                                                  gATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgctaacaggctggctgaaatgcaatggtgccgcttt                                                            <  1:505490‑M1/143‑85 (MQ=255)
                                                                                   gaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGAAGCAACGGCTGCATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAtcc                                                           <  2:377676‑M1/101‑2 (MQ=255)
                                                                                   atatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGGGGTATTGAGCAATCa                                                           >  1:187510/1‑143 (MQ=255)
                                                                                          aTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattgcctgttggtgtcccggttccgtggccttcagacactccgccaacaggctggctgaaatgcaatggtgccgcttttgctgccg                                                    >  2:77795‑M1/1‑51 (MQ=255)
                                                                                            cGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa                                                  <  1:16075‑M1/143‑95 (MQ=255)
                                                                                                   ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATGGAGCAAACAGTAATCATTCAGTggg                                           <  2:407301‑M1/117‑1 (MQ=255)
                                                                                                   ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCCATACCGGTTATGATTGGTGGTATTGAGCAATGAGTAATCATTCAGTggg                                           <  1:756528‑M1/117‑1 (MQ=255)
                                                                                                    tgttatttctgcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                                          >  1:414835‑M1/26‑143 (MQ=255)
                                                                                                     cTGTGCAATCGGCTCTCGAATATGTTGGTTTGGCAGAAGGctctgcattacctgttggtgtcccggttccgttgccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccg                                         <  2:229343‑M1/143‑104 (MQ=255)
                                                                                                      tgtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccgg                                        >  1:134758‑M1/1‑39 (MQ=255)
                                                                                                        atttcctcattttcagaaacgTTCGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAACCATTCAGTGGGGGTgg                                      >  2:456881‑M1/22‑143 (MQ=255)
                                                                                                           aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactg                                   <  1:727311‑M1/143‑110 (MQ=255)
                                                                                                            ctgcatgggcatacacgTCGGTTCGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATg                                  >  1:70694‑M1/18‑143 (MQ=255)
                                                                                                            aaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggcactgg                                  >  1:75449‑M1/1‑33 (MQ=255)
                                                                                                             ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCGGTGGTGGTGTAATGc                                 <  1:18579‑M1/127‑1 (MQ=255)
                                                                                                             ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGc                                 <  1:110596‑M1/127‑1 (MQ=255)
                                                                                                               ggCCCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatgacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggttccgctgtttctgctgaagaatacccggaactggcaa                               <  1:554907‑M1/143‑114 (MQ=255)
                                                                                                                 ttttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGACTGCCGCa                             <  2:817907‑M1/131‑1 (MQ=255)
                                                                                                                  tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaacaccaagaactagcaaaag                            >  2:481927‑M1/1‑27 (MQ=255)
                                                                                                                   ctcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaa                           >  1:747525/1‑143 (MQ=255)
                                                                                                                    tcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgccttttctgctgaagaatacccggaactggcacaggct                          >  2:198186‑M1/1‑25 (MQ=255)
                                                                                                                     cGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgatttttctgctgaagaataccaggaactggcaaaggatt                         >  1:739069‑M1/1‑24 (MQ=255)
                                                                                                                             ttGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgaca                 >  1:786350‑M1/1‑16 (MQ=255)
                                                                                                                                 tttGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactacgccaacaggctggctgaaatgcaatggtgccgctttttctggtggagaatacccggaactggcaaaggcttatccgacaaata             >  2:269877‑M1/1‑12 (MQ=255)
                                                                                                                                 tttGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccaccccgccaacaggctggccgaaatgcaatggtgccgctttttctgctgaggaatacccggacctggccaaggcttatccgacaaata             >  2:152543‑M1/1‑12 (MQ=255)
                                                                                                                                 TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAACTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGAGGGGATGGAATGACGCAAAAGCATCTGCCTCTg             <  1:499854‑M1/143‑1 (MQ=255)
                                                                                                                                     ggcgaaggccctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaatt         <  2:753606‑M1/140‑136 (MQ=255)
                                                                                                                                      gagaAGGctctgcattaccagttggagtcccggttccgtggccttcagccgctccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagcataccagggcctggcaaaggcgtatccgccccctaaagcg        >  1:817748‑M1/1‑7 (MQ=255)
                                                                                                                                           ggcgctggattgcctgttggtgtcacggttccgtggccttcaggccctccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctga   <  2:228316‑M1/143‑142 (MQ=255)
                                                                                                                                            GAGCAAAACGCCATGCCGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCCGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGa  >  2:719091‑M1/1‑143 (MQ=255)
                                                                                                                                            |                                                                                                                                              
TGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGA  >  NC_000913/1207665‑1207947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.