| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1979489 | 0 (0.000) | 85 (0.970) | 52/424 | NT | 100% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290111 | NA (NA) | intergenic (‑32/+1) | insH1/yejO | IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system | |||||
Only 100 of 131 total aligned reads displayed.
TAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATTAATTATCTTTACTAATAATCAGACTAATATTTACCTGTTTGACCGAGTTGGGATTGCGTCGTTTCTCCATTAGGAGTAAAGCTTTAATGTCACCTG > NC_000913/1979253‑1979727 | aacggtaaccaactggcgatgttattcgcgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataactccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AAtt > 1:701271‑M1/234‑239 (MQ=255)aacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AAtt > 1:765118‑M1/234‑239 (MQ=255) atgtgtataagagacagatgttattcacgctggccaacctgttgcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaacttgggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AAtt > 1:385510‑M1/233‑238 (MQ=255) tacagcaattacttaacataaattgaaaagtcaTACATGTTTTTTGGGTGTATTTCAATCTGTTAAAAAGGTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTAGTTTTAAACAGACACTTACCGCACAACAAACT‑AAgga < 2:539698‑M1/222‑4 (MQ=255) ccaactggcgatgttattcccgctggccaacctgtttaggggggacaaaatgatacggcagtaggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaaggaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACaa > 2:1027720‑M1/226‑239 (MQ=255) aactggggattttattcacgctggccaaccgggttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACaaag > 1:197105‑M1/224‑239 (MQ=255) ccggcggtgtttttcccgagggccaccctgtttcggggggaccaaatgatacgtcagtgggagaaatctcactaaaaactgggaataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactaagtcagcagagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACaaagaa > 2:882659‑M1/222‑239 (MQ=255) ctatgttattcacgcgggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAgg > 1:835723‑M1/218‑238 (MQ=255) cATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAgaaaggtgcgaacactgtt > 1:539698‑M1/1‑219 (MQ=255) taAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAagaaggggcgaacaaaccccagaaaagaga > 2:891157‑M1/1‑209 (MQ=255) cgcgtgccaatctgtgtcgggcggaccaaatgatacggtagtgggagagatctcaataaaaaccggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAATCAACtt > 1:1035129‑M1/206‑239 (MQ=255) gTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatca > 1:179140‑M1/1‑206 (MQ=255) gTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatca > 1:446254‑M1/1‑206 (MQ=255) gcccacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAAAACAAAGAAAAGCAACAAAAaacttaaagt < 2:525214‑M1/39‑4 (MQ=255) ccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAATCAACttaatgt > 1:812804‑M1/200‑238 (MQ=255) aTACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGAT‑AGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatataagatcatgtt > 1:624074‑M1/1‑202 (MQ=255) acctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAATCAACttaatgttaat > 1:653718‑M1/197‑239 (MQ=255) ttttgttttgGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgt < 1:252262‑M1/239‑41 (MQ=255) cctgtttcgggcggagcaaatgatacgtcagtaggatagatctaactaaaaacgggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAATCAACttaatgttaatg > 1:933537‑M1/196‑239 (MQ=255) tgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGaa > 2:1017386‑M1/194‑239 (MQ=255) tgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGaa > 1:525214‑M1/194‑239 (MQ=255) ttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAAt < 2:293227‑M1/28‑1 (MQ=255) tggtcaaaatgattcggcggtgggagagacttccataagaactggcgataacgccttaaatggtgaagaaacggtctaaataggctgattcaaggcatttaagggagaaaaaatcggctcaaacattaagaaatgaatggacttagtcatccgagaataatttcccctctaattcgcaccttccCT‑AATTAAATGCAAAGAAAGGCAACAAGCAACTTAATGTTAATGAAATGTTTTa > 2:140938‑M1/185‑238 (MQ=255) accaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGcaac < 2:924434‑M1/25‑1 (MQ=255) cAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca < 2:484171‑M1/239‑60 (MQ=255) ttAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAgtaaggagcgaacaagtccctgatatgagatcctgtttgtcatcttacgccatagaacagggttca > 1:198395‑M1/1‑173 (MQ=255) ttAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgttttccatctggagccaaaaaaaagggttat > 2:749848‑M1/1‑173 (MQ=255) ttAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca > 1:909874‑M1/1‑173 (MQ=255) ttAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc > 1:633759‑M1/1‑173 (MQ=255) ttAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcacctggagccatagaacagggtta > 1:1091784‑M1/1‑173 (MQ=255) aaaaGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGAT‑AGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat < 2:624074‑M1/239‑71 (MQ=255) ttCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat < 1:891157‑M1/239‑78 (MQ=255) gatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCgg > 1:8258‑M1/158‑238 (MQ=255) atcttactaaaaactggggataacggcttaaatggagaagaaacggtctaaaaaggcagattcaaggcatttacgggagaaaaaaccggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGgag > 2:200220‑M1/157‑239 (MQ=255) tacgctaGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaccaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 1:523096‑M1/1‑157 (MQ=255) actaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATTCGGAGAATCa < 1:200220‑M1/88‑1 (MQ=255) ctggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTa > 1:1091988‑M1/144‑239 (MQ=255) caaAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaac > 1:45597‑M1/1‑145 (MQ=255) caaAAATGAAACAGGAATAAACGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaac < 2:45597‑M1/158‑14 (MQ=255) gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTaca < 1:10468‑M1/93‑1 (MQ=255) gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGaa < 2:263087‑M1/85‑1 (MQ=255) gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGaa > 1:263087‑M1/112‑196 (MQ=255) tGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgctatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagccatcaacttaccttcgccgaccgagaattcagcagaaagcgccgcaaaaccaga > 2:135574‑M1/1‑111 (MQ=255) cacaGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagaagaaaacgccgccaacccagaaaaa > 2:35223‑M1/1‑107 (MQ=255) tCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagccatcaacttaccttcgccgacagtaaattcaacagtaagccccgtcaaaccaaaaaagagatt > 2:408825‑M1/1‑102 (MQ=255) tCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaaatccctgatatgagatcatgtttgtcatcgggagccatagaccaggggtcacaaagagtcaccaacttaccttcccacaaagggaattcaacagtaagggccgtcacacaacaaaagagatt > 2:506761‑M1/1‑102 (MQ=255) tCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt < 1:318057‑M1/211‑120 (MQ=255) ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAATCAACttaatgttaatg < 2:173997‑M1/44‑1 (MQ=255) ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCT‑AATTAAATACAAAGAAAGGCAACAATCAACttaatgttaatg > 1:173997‑M1/87‑130 (MQ=255) cGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccaccagggaattcagcagtaagcgccgtcaaaccaaaaacaagattttcttgtcccgcat > 2:196428‑M1/1‑88 (MQ=255) aataatCATCTTCTATAAATAATCCCTTTCAAGCAATTCCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggag < 2:633759‑M1/239‑156 (MQ=255) aataatCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccccatgaag > 1:517217‑M1/1‑84 (MQ=255) catcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagat > 1:346230‑M1/1‑78 (MQ=255) catcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaag < 2:802914‑M1/94‑17 (MQ=255) tGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtcc > 1:772447‑M1/1‑74 (MQ=255) tGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtcc < 2:772447‑M1/93‑20 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgtacaagtccctgttatgagatcatgtttggcatctggagccatagaacagggttcatcatgagccatcaacttaccttcgccgacagtgaatccagcagtaagcgtcgtcagaccagaaataagattttcttgtcccgcatggagctgatcctgccctggcacaaaa > 1:631929‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagccgtaatcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaaac > 1:1036654‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagccgtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaaca > 1:986094‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaaca > 1:866775‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccccatggacaagattctgccatggcaaaaaa > 2:713397‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttccttttcccccatgaagcaaattctgccacggaaaacaa > 2:1075007‑M1/1‑62 (MQ=255) tCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtatgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagccgtaagcgccgtcagaccagcaaaaagattttcttgtcccgcatggggaagattatgccacggacaaaaa > 1:50109‑M1/1‑62 (MQ=255) aagatttttataaagaacagattttaaaacagacactttccGCACAACAAACT‑AAtgaaagtgcggacaagtccctgatacgaaatcatgttggtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctggtcccgcatggagcagattctgccatggcaaaacatggtgga < 2:273455‑M1/219‑185 (MQ=255) tACCGGGTAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaaggttcatcatgagtcatcaacttaccttcgccgacagtgcatccatgagtaagcgccgtcagaccagaaaagacatttttttgccccgcatggagtagaatctgacatggcaaaacaaggtggaatgcatc > 2:195173‑M1/1‑48 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctggtatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagaatcggccatggcaaaaaatgggggaagtcaac > 2:406276‑M1/1‑48 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagcgattttcttgtcccgcatggagcagattctgccatggccaaacctggtggaagtcatc > 1:136913‑M1/1‑48 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttttc > 2:936315‑M1/1‑48 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatc > 1:781141‑M1/1‑48 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatc > 1:681057‑M1/1‑48 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaaca < 1:731610‑M1/225‑178 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc < 1:936315‑M1/193‑146 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa > 2:360477‑M1/1‑48 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa < 1:360477‑M1/149‑102 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtaatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccaaggcaaaaca > 2:731610‑M1/1‑48 (MQ=255) cAGATACGTTTTTTTTAACCAGGACCTTACCGCACAACAACCT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgag < 2:681057‑M1/239‑195 (MQ=255) gATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagcacagggttcatcatgagtcatcaacttaccttcgccgaaagtgaattcagcagtaagcgccgtcagaccagaaaagagcttttcttgtccagaatggtgcagattctgccatggaaaaacacggtggaagcaactgggcg > 1:1026490‑M1/1‑43 (MQ=255) aTAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagcttttcttgtcccgcatggagacgattctgccatggcaaaacatggtggaagtcatcgagccg > 1:679001‑M1/1‑42 (MQ=255) gCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgtttt > 1:293986‑M1/1‑38 (MQ=255) gCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagaacatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgccagtgaatgcagcattaagcgccggaagaccagaaaagagattttcttgtcccgcatggagcagattaggccatggccaaccacggaggaattcatcgagacggttt > 2:583108‑M1/1‑38 (MQ=255) ttttAAAC‑CACACATTCCCCACAAAAAAATCAAggaagttgctacaaatgccctgatttgagataatgtttgtcatctggacccatagaaccgggttcatcatgagtcagcaacttaccttcgccgacagtgaattcagcagtaagcgccttcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgtttttcccc < 2:781141‑M1/239‑207 (MQ=255) gACACTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacaagaaaagagattttcttgtcccgcatggagcagattctgccacggcaaaacatggtggaagtaatcgag > 1:273455‑M1/1‑24 (MQ=255) acacTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagcgattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcaagccgttttaccccaaagcgggaa > 2:1062814‑M1/1‑23 (MQ=255) acacTTACCGCACAACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagggaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtgaaagtcatcgagccgttttaccccaaggctgtta > 1:777161‑M1/1‑23 (MQ=255) tccacctttggcgaaggaaggtgcgaaaaaggccctgaaatgggatcatgtttgtcctctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccgg < 2:958305‑M1/226‑225 (MQ=255) tggggaagtttttaggaaggtgctaacaagtcccttatattggattatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggc < 2:410324‑M1/226‑226 (MQ=255) cacaACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatgttggcagtcatcgagccgttttaccccaagccgggaaatggcgggcg > 2:117853‑M1/1‑13 (MQ=255) cacaACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcaccgagccgttttaccccaaggctggaaatggccgggg > 2:913964‑M1/1‑13 (MQ=255) cacaACAAACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagc < 2:642545‑M1/169‑157 (MQ=255) caacaaACT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagcaatcggcccgttttaccccaaggctggtaaaggccggcca > 2:1031418‑M1/1‑11 (MQ=255) aacaaACT‑AAggaaggtgcggaaaaggccctgatttgagatcatgtttgtcctctggagccatagaacagggttcagcatgagtcatcaacctaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgacc < 2:346230‑M1/239‑230 (MQ=255) aaCT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggatccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagggaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttat < 1:269166‑M1/239‑234 (MQ=255) aCT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatc < 1:749848‑M1/239‑235 (MQ=255) aCT‑AAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatc < 1:610648‑M1/239‑235 (MQ=255) t‑AAggaaggtgcgaaacagtccctgatttgggataatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccggcagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggaaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccg < 2:1043494‑M1/239‑237 (MQ=255) ttaggaaggtgggaacaagtccctgatagtgggtcatgtttgtcacgtggggccatagaacagggttcatcatggggcatcaacttaccttcgccgacagtgaattcagcagtaagcggcgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccg < 2:321031‑M1/237‑237 (MQ=255) aaggaaagtgctaacaaggccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgcc < 1:1106657‑M1/168‑167 (MQ=255) aggaaggtgcgaacaagtccctgaaatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgct < 1:606411‑M1/239‑239 (MQ=255) aggaaggtgcgaacaaggccctgatatgcgatcatgtttgtcatcgggagccagagaacggggttcatcatgagtcatcaactgaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggggaccttatccgct < 1:476335‑M1/239‑239 (MQ=255) aggaaggtgcaaataaggccttgatatgagatcatgttggtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgct < 1:321916‑M1/239‑239 (MQ=255) | TAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACT‑AATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATTAATTATCTTTACTAATAATCAGACTAATATTTACCTGTTTGACCGAGTTGGGATTGCGTCGTTTCTCCATTAGGAGTAAAGCTTTAATGTCACCTG > NC_000913/1979253‑1979727 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |