New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207805	64 (0.960)	23 (0.390)	20/252	2.8	32.9%	coding (305/630 nt)	stfP	e14 prophage, uncharacterized protein
	?	NC_000913	= 1209602	37 (0.630)					pseudogene (18/501 nt)	stfE	pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

TGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGA  >  NC_000913/1207665‑1207947                                                                                                                                             |                                                                                                                                               tGCCCGCCCGGCGGAGGGGCGGCACGACCAGTTACGTGCCGCGCTTCGCGCGCTGCTGTTAAGCCGCAAGAAGCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAg                                                                                                                                              <  1:839297/143‑1 (MQ=17) tGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAg                                                                                                                                              <  2:1058833/143‑1 (MQ=255)   ccAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCGCTCGAAAACCTTGGGTTGGGAGGAGGAGcg                                                                                                                                            >  2:87679/1‑142 (MQ=255)    cAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAGCGGCTCTCGCAAACCGTGGTTTGGGAGAAGGAGCac                                                                                                                                           >  1:547051/1‑142 (MQ=255)     aGCCTGGAGACGGGGCGGCACGACCAGTTACGTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgc                                                                                                                                          <  1:273078‑M1/143‑7 (MQ=255)      gCCTGGAGGCGGGGCGGCGCCACCAGTACCTTCCCGAGCTTCGCGCGTTGCGGTTACGGCGCACGGATCCGTTCGGCGATATCAAATCGGATGGCACTGTGCTTACGGCTCGCGAAACCCTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                                         <  1:295438/143‑1 (MQ=255)      gCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGACAACCTTGGGTTGGGAGAAGGAGCaaca                                                                                                                                         >  2:961333/1‑141 (MQ=255)        cTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCGAATGGGATGGCACAGTGCAAACGGCTCTCGAAAACCCTGGGGGGGGAGCGGGctcggcatt                                                                                                                                       >  1:407182‑M1/1‑134 (MQ=255)          ggcgcaGGGGCCGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCa                                                                                                                                     <  1:652528/138‑1 (MQ=255)            agaAGGGGCGGCACGACCAGTTACTTACCGTACTTCGTGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAAt                                                                                                                                   <  1:7915/143‑1 (MQ=255)            agaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacct                                                                                                                                   >  2:865636‑M1/1‑130 (MQ=255)              agggggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                                                                                 <  1:727563/141‑1 (MQ=255)              aaGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                                                                                 <  2:676363/143‑1 (MQ=255)               aGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                                <  2:186943/143‑1 (MQ=255)                ggggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                               <  2:791529‑M1/143‑18 (MQ=255)                  ggcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATAGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCACAGCTCAATgcagca                                                                                                                             >  2:374218/1‑143 (MQ=255)                   gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTGGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCaa                                                                                                                            >  2:595476/1‑143 (MQ=255)                          gACCAGTTACTTACCGCTCTGCGCGCGCGGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGTATGGCACAATGAAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTAc                                                                                                                     <  2:592389/143‑1 (MQ=21)                             cAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAtg                                                                                                                  >  2:639940/1‑142 (MQ=255)                              aGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAAATCAACGCAGCAACGGCTACATTa                                                                                                                 >  1:45928/1‑143 (MQ=255)                                ttacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                                               <  1:941995/143‑1 (MQ=255)                                ttacctacCGCACTTCGCGCGCTGCTTTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                                               <  1:1153399/143‑1 (MQ=255)                                 tacttacCGCACTGCGCGCGCTGGTGTGAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACGGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                                                                                              <  1:752752/143‑1 (MQ=255)                                 tacttacCCCACTTCGCGCGCTGCTGCTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                                                                                              <  2:725265/143‑1 (MQ=255)                                       ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca                                                                                                        <  2:779919‑M1/143‑41 (MQ=255)                                       ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGAGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCCAAACTCACTGCAGCAACGCACACATTACGACGCAcc                                                                                                        >  1:469984/1‑143 (MQ=18)                                        tgcACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcag                                                                                                       <  1:1019494‑M1/142‑42 (MQ=255)                                        cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAGACCTCGGTTTGGGAGAAGGAGCAACAATCAATGCAGGAACGGCTACAGTAGGACGCAcca                                                                                                       >  1:900680/1‑142 (MQ=21)                                        cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCGATGAAACAACTGCTAGATTAggcaagcttt                                                                                                       >  2:836354/1‑135 (MQ=18)                                             ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGtttg                                                                                                  >  2:746986/1‑142 (MQ=255)                                                gtgcgcggccctcaaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                                               <  1:990739/130‑1 (MQ=255)                                                 cgcgcTGCTGTTGTGCCGCAAGCACTTGTCGGGCGATATCTAAGCGGGTGGCACTGTGCAAACGGCTCTCTAAATCCTGGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                                              <  1:59175/143‑1 (MQ=255)                                                 cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                                              >  2:1012761/1‑143 (MQ=255)                                                      tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAACACCTTGGTTTAGGAGAAGGAGCAAAACTCAATGCAGCAACCGCTACATCAGGACGCACCGGTTTCATAGCtata                                                                                         >  1:1004441/1‑143 (MQ=255)                                                      tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCCATGCAGCAACGGCTACATCAGGACGCACCGGTTTCATACCtata                                                                                         >  1:429755/1‑143 (MQ=255)                                                       ggtgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGGTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAc                                                                                        <  2:765978/141‑1 (MQ=255)                                                         tgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAGACCTTGGTTGGGGAGAAGGctctgcattaccggttggtgtcccggttccgtggccttcagccacgccgccaaccggc                                                                                      >  1:1160754‑M1/1‑85 (MQ=255)                                                             aaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                                  <  1:160814/143‑1 (MQ=255)                                                             aaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                                  <  2:493475/143‑1 (MQ=255)                                                               gCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctg                                                                                >  1:1132784‑M1/1‑79 (MQ=255)                                                                  gCAAGAATCCGTTTGGCGATATCAAATCGGATGACACGGTGCAAACGGCACTCGAAAAACTTGGTTTGGCAGGAGGAGCAGAACTCCACGCAGCAACGGCTACATACGGACGCACCGGTTTCCTAGCTGTACCGGtgcacatt                                                                             >  1:1100550/1‑136 (MQ=21)                                                                    aaGAATCCGTTTGGCGATATCAAATCGGATGGCCCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacccgttggtgtcccggttccgtggccttcagccactccgccaccaggctggctgcaatg                                                                           >  1:823505‑M1/1‑74 (MQ=255)                                                                    aaGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatg                                                                           >  2:1071460‑M1/1‑74 (MQ=255)                                                                      gAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATaggtg                                                                         >  1:570291/1‑143 (MQ=255)                                                                       aaTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAGAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaa                                                                        <  1:263125‑M1/143‑73 (MQ=255)                                                                          ccGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGatat                                                                     <  1:1012761/143‑1 (MQ=255)                                                                            gTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGCAAACCTTGGTTTGGGAGAAGGccctgcattacctgtacgtgtcccggttccgtggcctccagccacgccgccaacaggctggcagaaatgcaatggtg                                                                   >  1:847909‑M1/1‑66 (MQ=255)                                                                            gTTGGGCGATACCAAGTCGGACGGCACTGTGCACACGGCTCTCGAAATCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtg                                                                   <  2:407182‑M1/143‑78 (MQ=255)                                                                                ggCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgc                                                               <  1:324702‑M1/143‑82 (MQ=255)                                                                                  cGATATCAAATGGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                             <  2:1140841/143‑1 (MQ=255)                                                                                    atatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGATTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGCAATGATTGGTGGTATTGCGCAATCa                                                           >  1:74087/1‑143 (MQ=255)                                                                                     tctCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTGGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAg                                                          <  2:74836/141‑1 (MQ=255)                                                                                          aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATc                                                     >  2:148527/1‑143 (MQ=255)                                                                                            tCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAt                                                   >  2:807884/1‑143 (MQ=255)                                                                                                  ggCACTGTGCAAACTGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaata                                             <  2:1023556‑M1/143‑100 (MQ=255)                                                                                                  cgCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTg                                             <  1:961333/142‑1 (MQ=255)                                                                                                    cACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGACTACATTAGGACGCACAGGTTTCATAGCTATACCGGTTATGATGCGTGGTATTGAGCAATCACTAATCATTCAGTgga                                           >  1:581719/1‑142 (MQ=39)                                                                                                    cACTGTGCAAACGACTCTCGAAAACCTTGGATTGGAAGAAGGAGCAAAACTCAATGCAGCAACGGCTACGTTACTACGCACCGGCTCCATACCTATACCGCCGACGAGTGGCGGCACTGACCCATCAGAGATCATTccgagcg                                           >  1:731801/1‑137 (MQ=255)                                                                                                     gcTGGGCAAACGGCTCTCGCAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                                          <  1:836354/142‑1 (MQ=255)                                                                                                     aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaataccc                                          <  2:1080859‑M1/143‑103 (MQ=255)                                                                                                      cTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggggg                                         >  2:853461/1‑143 (MQ=255)                                                                                                         tgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcctccagccacttcgccaacaggctggcgttaatgcaatggtgccgctttttctgctgaagaatacccggaa                                      >  2:430153‑M1/1‑37 (MQ=255)                                                                                                         tgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTgg                                      >  2:267021/1‑143 (MQ=255)                                                                                                           cAAACGGCTCTCGAAACCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaact                                    <  2:605541‑M1/143‑109 (MQ=255)                                                                                                           cAAACGGCTCTCGAAAACCTTGGGTTGGGAGAAGGAGCAAAACTCACTGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGaa                                    <  1:971098/143‑1 (MQ=255)                                                                                                               cgtggctcGAAACCCTTGGTTTGGGAGAAGTGGCAACAGTCAATGCGGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCATTAATCATTCAGTGGGGGTGGAATGcc                                <  1:948688/138‑1 (MQ=255)                                                                                                               cGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                                >  2:699133/1‑143 (MQ=255)                                                                                                                ggCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCg                               >  2:834049/1‑143 (MQ=255)                                                                                                                  ttttcataaaCGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCa                             >  1:94158/8‑143 (MQ=255)                                                                                                                  ttttcataaaCGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCa                             >  1:94229/8‑143 (MQ=255)                                                                                                                   tctcGACGACCTCGGCTTGGGAGCAGGctctgcattacctgttggtgtcccggttccgtgcccttcagcctctccgccaacaggctcgctcaactgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg                            <  2:996970‑M1/143‑117 (MQ=255)                                                                                                                   tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg                            <  1:865636‑M1/143‑117 (MQ=255)                                                                                                                   tctcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAACGCCGCaa                            >  2:663161/1‑143 (MQ=255)                                                                                                                        aaaaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttat                       >  2:290422‑M1/1‑22 (MQ=255)                                                                                                                         aaaCGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAt                      >  1:87354/1‑143 (MQ=255)                                                                                                                         aaaCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAt                      <  2:127119/143‑1 (MQ=255)                                                                                                                          aaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaataccaggaactggcaaagccttaccc                     >  1:372782‑M1/1‑20 (MQ=255)                                                                                                                             cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaagtggcaaaggcttatagcac                  >  2:710889‑M1/1‑17 (MQ=255)                                                                                                                              ttGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAACAGCATCTGcc                 >  2:668393/1‑143 (MQ=255)                                                                                                                                   ttGGGAGAAGGAGCAATGCGCGATGCCGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgg            <  1:993516/143‑1 (MQ=255)                                                                                                                                   ttGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCGATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgg            <  2:582573/143‑1 (MQ=255)                                                                                                                                     gggTGAAGGccctgcattacctgtgggcgtcccggttccgtggccttcagcgacttcgccaccaggctggctgaaaggcaatggtgccgctttttctgctgaagaatacccggaactggcaaagacttatccgacaaataaat          <  1:784928‑M1/143‑135 (MQ=255)                                                                                                                                     gggAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggg          <  2:87354/143‑1 (MQ=255)                                                                                                                                      ggAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGCATGCCGCACAAGCCTCTGCCTCTgggcg         >  2:521369/1‑141 (MQ=255)                                                                                                                                      ggAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggg         >  1:611753/1‑143 (MQ=255)                                                                                                                                       gagaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattg        >  1:1035700‑M1/1‑7 (MQ=255)                                                                                                                                       gagaAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggggg        <  2:11092/143‑1 (MQ=255)                                                                                                                                        agaAGGctctgccttacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgc       <  2:717809‑M1/143‑138 (MQ=255)                                                                                                                                         gagggAGCACAACGCAATGCACCACCGGCTACAGTAGGACGCACCGGTTGCATGGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGa      <  2:237251/140‑1 (MQ=255)                                                                                                                                             gAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCCACAGCATCTGCCTCTGGGGGGGATggc  >  2:253289/1‑142 (MQ=255)                                                                                                                                             |                                                                                                                                               TGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGA  >  NC_000913/1207665‑1207947

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.