New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207805	64 (0.960)	23 (0.390)	20/252	2.8	32.9%	coding (305/630 nt)	stfP	e14 prophage, uncharacterized protein
	?	NC_000913	= 1209602	37 (0.630)					pseudogene (18/501 nt)	stfE	pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

CAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAAC  >  NC_000913/1209463‑1209739                                                                                                                                            |                                                                                                                                          cAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATGGCATTTCGGCCGGGTTGCTGTAGCAGCGCCTGAAGGCCGCGGGACCGGGGCACCAGCAGGTAAGGCAGAGcgt                                                                                                                                        >  2:532950/1‑141 (MQ=255)    gCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAGGCAGAGccttct                                                                                                                                     <  2:717809‑M2/143‑7 (MQ=255)     cAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctc                                                                                                                                    >  1:1035700‑M2/1‑136 (MQ=255)       atttatttGTCGGATAAGTCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCCTTTCAGCCAGCCTGGTGGCGAAGTCGCTGAAGGCCACGGAACCGGGACGCCCACAGGTAATGCAGGGccttcaccc                                                                                                                                  <  1:784928‑M2/143‑10 (MQ=255)               gtgctataagcCTTTGCCACTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaag                                                                                                                          >  2:710889‑M2/6‑126 (MQ=255)                tCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACg                                                                                                                         >  2:457124/1‑143 (MQ=255)                  gggTAAGGCTTTGCCAGTTCCTGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggtt                                                                                                                       >  1:372782‑M2/1‑123 (MQ=255)                    acacgCCTTTCCCAGTTCCGGGTAGTCTGCAGCAGAAGAAGCGGCCCCATTGCATTGCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGTGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTa                                                                                                                     <  1:973286/139‑1 (MQ=255)                    aTAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggtttt                                                                                                                     >  2:290422‑M2/1‑121 (MQ=255)                         ccTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                <  1:865636‑M2/143‑28 (MQ=255)                         ccTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCAGTTGAGCGAGCCTGTTGGCGGAGAGGCTGAAGGGCACGGAACCGGGACACCAACAGGTAATGCAGAGcctgctcccaagccgaggtcgtcgaga                                                                                                                <  2:996970‑M2/143‑28 (MQ=255)                          cTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGaaaa                                                                                                               <  2:421389/143‑1 (MQ=255)                             tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATga                                                                                                            <  2:718968/143‑1 (MQ=255)                              gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACCGGTCATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAAAgaa                                                                                                           >  2:140238/1‑143 (MQ=255)                              gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCAGAGCATTACAGCCAACCTGTCGGCGGAGGCGCTGAAGGCCACGGAACCGGGACACCAACAGGGAATGCAGAGCCTGCTCCCAAACCAACGTTTATGAAAATgaa                                                                                                           <  2:879425/143‑1 (MQ=255)                                 aGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaagggtttcgagagccgtttg                                                                                                        <  2:605541‑M2/143‑36 (MQ=255)                                  ggtgcGGGTATGCGTCAGCAGAGAAAGCGGCACCATTGCATTGCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGaaa                                                                                                       <  1:739717/139‑1 (MQ=255)                                   ttCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTAACGCCAGCCTGTTGGCGAAGTGGCTGGAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                      >  2:430153‑M2/1‑106 (MQ=255)                                   ttCCGGGTATGCGTCAGCAGAAAAGGCGGGACCATTGGATTTCAGCCAGCCTGTTGGCGGAGGGGCGGAAGGCCACCGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAAt                                                                                                      <  1:622456/143‑1 (MQ=255)                                       gggTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagt                                                                                                  <  2:1080859‑M2/143‑42 (MQ=255)                                        ggTATTCTGCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCGTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACaa                                                                                                 <  1:881457/143‑1 (MQ=255)                                          tATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagcagtttgcacagtgcc                                                                                               <  2:1023556‑M2/143‑45 (MQ=255)                                                 cagcagAAAAAGCGGCACCATTGCATTTCCGCCAGCCTGTTGGCGGAGTGGCTGAACGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAAAGAAGACATAACAAGCAAATGGc                                                                                        >  1:166228/1‑143 (MQ=255)                                                           aGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCAACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCTACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTg                                                                              <  2:567588/143‑1 (MQ=255)                                                            gCGGCACCATTGCATTTCGGCCAGCCTGTTGGCGGAGTGGCCGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGc                                                                             <  2:892885/143‑1 (MQ=255)                                                            gCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgcc                                                                             <  1:324702‑M2/143‑63 (MQ=255)                                                             cGGCACGATTGCATTCCAGCCAGCCTGCTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCt                                                                            <  1:870383/143‑1 (MQ=255)                                                               gCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACACGCAAATGGCATCATTCCTGCttt                                                                          >  1:851508/1‑143 (MQ=255)                                                                cACCATTGCATTTCTGCCAGCCTGTTGGCGGCGTGGCTGGAGGCCACGGAACCGGGACACGTACAGGTAATGCAGGGccttctcccaaaccaaggtttgcgagagccgtttgcacagtgccatccgatttgatatcgccaaac                                                                         >  1:847909‑M2/1‑77 (MQ=255)                                                                cACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggatttcgagagccgtgtgcacagtgccgtccgacttggtatcgcccaac                                                                         <  2:407182‑M2/143‑67 (MQ=255)                                                                   cATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGCTTATGAAAATGAAGAAATAACAAGCACATGGCAGCACTCCTGCTTCTAca                                                                      >  1:876233/1‑142 (MQ=255)                                                                     ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttctcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggatt                                                                    <  1:263125‑M2/143‑72 (MQ=255)                                                                       gtaTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg                                                                  <  1:24203/141‑1 (MQ=255)                                                                       gCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg                                                                  <  1:803290/143‑1 (MQ=255)                                                                       gCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGACCACTAACAGGTAATGCAGAGTCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAggg                                                                  <  1:819333/143‑1 (MQ=255)                                                                        cATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattctt                                                                 >  2:1071460‑M2/1‑69 (MQ=255)                                                                        cATTGCAGCCAGCCTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACGGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagggccatccgatttgatatcgccaaacggattctt                                                                 >  1:823505‑M2/1‑69 (MQ=255)                                                                             cagccagcCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggc                                                            >  1:1132784‑M2/1‑64 (MQ=255)                                                                                gcggcctcgtGGCGCAGTGGCTGAAGGCCACGGAACCGCGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                                         <  1:247447/134‑1 (MQ=255)                                                                                ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTAACCAGGGGGATGTAAc                                                         >  1:170365/1‑143 (MQ=255)                                                                                 cagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                                        <  2:191873/143‑1 (MQ=255)                                                                                   gccGGTTGGCGGCGTGGCTGAAGGCCACGGAACCGGGACACCAACCGGTAATGCAGAGccttctccccaaccaaggtcttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaaca                                                      >  1:1160754‑M2/1‑58 (MQ=255)                                                                                         tggcggagtggcggagGGCCACGGAACCGGGACACCAACAGGTAATGGAGAGCCTTCTCCCAAACCATCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAtt                                                <  1:916753/143‑1 (MQ=255)                                                                                                 tGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGt                                        <  2:198797/143‑1 (MQ=255)                                                                                                 gggCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGt                                        <  2:1109689/142‑1 (MQ=255)                                                                                                    cTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgca                                     <  1:1019494‑M2/143‑103 (MQ=255)                                                                                                     tGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcgg                                    <  2:779919‑M2/143‑104 (MQ=255)                                                                                                          gCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCACCCCACGAACCGTTTGTGAAACAGAACAAATACCAAGCAAATGGAATGACTCCTGCTCCTAACAGGGCGCGTTAACAAGCTTATTGGCCAAGTAcgcctctc                               >  1:458889/1‑138 (MQ=255)                                                                                                           ccACGGAACCGGGACACCTACTGGTAATGCAGAGCCTTCTACCAAACCAACGGTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTCCGCGTATca                              <  1:885393/143‑1 (MQ=255)                                                                                                                gcaCCGGGACACCAACAGGTAATCCAGAGCCTTCTCCCCAACCAACTTTTATGAAAATGAATAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACaaa                         <  2:450254/141‑1 (MQ=255)                                                                                                                  aCCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATg                       >  2:933644/1‑143 (MQ=255)                                                                                                                   ccGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTTGCTATGTACGCGTATCAACAACTGa                      >  2:310560/1‑143 (MQ=255)                                                                                                                    cGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                     >  2:810969/1‑143 (MQ=255)                                                                                                                     gggACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGAATCAACAAATGAcc                    <  1:717809/143‑1 (MQ=255)                                                                                                                       gACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGGTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAg                  >  2:768047/1‑143 (MQ=255)                                                                                                                         cacCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGaa                <  2:474354/143‑1 (MQ=255)                                                                                                                         cacCAACAGGGAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCACGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGaa                <  1:1137496/143‑1 (MQ=255)                                                                                                                          acCAACAGGTAATGCAGAGCCTTCTCCCGTAGTAAGGTTGATGAAAATGAAGAAGTAACAAGCAAATGGCATCATTCCTGCGTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAGCAAATGACCAGAac               >  2:854814/1‑143 (MQ=255)                                                                                                                            cAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcccc             <  2:791529‑M2/143‑127 (MQ=255)                                                                                                                               gatggtaTGCAGTGCTGTCTACCAGACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTATCATGCTTCTTGGCTATGTACGCGTATCAACAAATGTCCAGACCACAGa          <  1:321108/137‑1 (MQ=255)                                                                                                                                aGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttct         >  2:865636‑M2/1‑13 (MQ=255)                                                                                                                                    aaTTCACAGCCTTCTCCCAAACCAACTTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGTTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACTCGTATCAACAAATGACCAGAACACAGATCTAc     <  1:172914/143‑1 (MQ=255)                                                                                                                                    aaTGCCGAGcccgctccccccccagggttttcgagagccgtttgcactgtgccatcccattcgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccag     >  1:407182‑M2/1‑9 (MQ=255)                                                                                                                                       gCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtacgtaactggtcgtgccgccccgtctccaggct  <  1:273078‑M2/143‑138 (MQ=255)                                                                                                                                            |                                                                                                                                          CAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAAC  >  NC_000913/1209463‑1209739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.