New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2290111NA (NA)68 (1.020) 57/284 0.1 94.4% intergenic (‑32/+1) insH1/yejO IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system
?NC_000913 4049890 = 4 (0.060)intergenic (+139/‑8) polA/spf 5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease/Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent

GAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACC  >  NC_000913/2289972‑2290249
                                                                                                                                           |                                                                                                                                          
gAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTACGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACGTGTTCGCACCTTCCAtc                                                                                                                                         >  2:1005112/1‑142 (MQ=14)
gAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGATCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATa                                                                                                                                         >  2:959552/1‑143 (MQ=17)
gAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAAATGACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAAACCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGGCTTGTTCGCACCTTCCATa                                                                                                                                         >  1:566498/1‑143 (MQ=255)
  aaaTCTCCGTTCTGGTCTGACGGCGCTCACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGTCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAAc                                                                                                                                       <  2:602541/143‑1 (MQ=255)
  aaaGCTCTTTTCTGGACTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAAc                                                                                                                                       <  2:23713/143‑1 (MQ=18)
   actcctgtttCTGGTCTGACGCCGCTTACGGCGCAATGCACTGCCGGCGAAGGTAAGTTGATGACTCACGATGCACCCTGTTCTCTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACg                                                                                                                                      <  1:315940/136‑1 (MQ=11)
   aagctcgTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACg                                                                                                                                      <  2:815732/140‑1 (MQ=21)
   aaTCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCACGGACTTGTTCGCACCTTCCATAACg                                                                                                                                      >  1:87219/1‑143 (MQ=18)
         ttttCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATATCATATCAGGGACTGGTTCGCACCTTCCATAACGCTGTAg                                                                                                                                >  1:158903/1‑143 (MQ=255)
             cTGGTCTGACGGCGCTTACTGCTGCATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGACCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGccac                                                                                                                            <  2:313962/143‑1 (MQ=255)
                 tCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGGTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGATCCCACCTACCATAACGCGGCAGcaaaagca                                                                                                                        >  1:167810/1‑136 (MQ=11)
                   ggACGGCGCTTACTGCTGAATTCACTGCCGGCGAAGTGAAGTTGATGACTCATGATGAACCCTGTTCTATTGCTCCAGATGACGAACATGATCTCATATCAGGGACTTGTTCGCACCTGCCATAACGCTGTAGCCACCAGacg                                                                                                                      >  1:568741/2‑141 (MQ=14)
                           cctACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTg                                                                                                              <  2:194302/141‑1 (MQ=255)
                            ttACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCAGAACGCTGTAGCCACCCGAACCGATATTGc                                                                                                             >  1:350095/1‑143 (MQ=255)
                                tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGaa                                                                                                         >  2:7371/1‑143 (MQ=255)
                                  ctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAACACAGATCttcaggcacg                                                                                                       >  1:942147/1‑135 (MQ=14)
                                     aaTTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACa                                                                                                    >  2:702925/1‑143 (MQ=255)
                                       ttCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACaaa                                                                                                  >  2:729542/1‑143 (MQ=255)
                                       ttCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGAACCGACaaa                                                                                                  >  1:942523/1‑143 (MQ=255)
                                       ttCACTGTCGGCGAAGGTAAGTTGAAGAATCATGATGATCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGATTGCACCTTCCATAACGCTGTAGCCACAAGATCAGATATTGCGGAACGACaaa                                                                                                  <  1:527521/143‑1 (MQ=18)
                                       ttCACTGGCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATTACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACaaa                                                                                                  <  2:637402/143‑1 (MQ=255)
                                          aCTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACGCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAagag                                                                                               >  2:753060/1‑143 (MQ=255)
                                           gcgtgtgCGAAGGGAAGCGCATGTCACGTGATGAACGCTGTGCTATGGTGCCAGATGACAAAGATGATCGCATATCAGCGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAgaga                                                                                              <  1:1029388/137‑1 (MQ=255)
                                            tGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATGTGATATCAGGGAATTGTTAGCACAGTCGATAACGCTGGAGCGGCCAGAAGAGCTATTGGTGATGGACAAAGAGaa                                                                                             >  2:122105/1‑143 (MQ=14)
                                              tcctcGAAGTTAAGTTGATCACTCACGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGTGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAAc                                                                                           <  2:364168/139‑1 (MQ=21)
                                               cGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACa                                                                                          >  1:534907/1‑143 (MQ=255)
                                                 gCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATAGCAGGGACTTGTTCGCACCTTCCATAACGCGGTAGCCACCAGAACAGATATTGGGGCACGACAGAGAGAAAgaga                                                                                        >  2:283374/1‑143 (MQ=18)
                                                      ctcaaGTTGATAACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg                                                                                   <  2:739465/140‑1 (MQ=255)
                                                          actggatgaCTCATGTTGAACCCTGTTCTATCGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTg                                                                               <  1:363469/139‑1 (MQ=255)
                                                           gtggaggaCTCATGATGAACCCTGTTCGATGGCCCCAGATGACAATCATGATCTCATATCAGGGACTTGTGCGCACCTTCCATAACGCTGGAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGa                                                                              <  2:101428/137‑1 (MQ=25)
                                                           gTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGTGGAACGACAAAGAGAAACACAACCAGATAGa                                                                              >  1:350583/1‑143 (MQ=255)
                                                               atgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGCAACAGAACCAGATTGCTGCa                                                                          >  2:387386/1‑143 (MQ=255)
                                                                 gaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGGTCTCTCCTGTATAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCAtt                                                                        >  2:533472/1‑143 (MQ=18)
                                                                    tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGCGAAACAGAACCAGATTGATGCCTTGAg                                                                     >  1:917690/1‑143 (MQ=255)
                                                                    tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGac                                                                     >  1:717789/1‑142 (MQ=255)
                                                                    tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAg                                                                     >  2:787559/1‑143 (MQ=255)
                                                                      atcatgcACCCTGTTCGATGGCTTCAGCCGCTCAACAGGCCGTCCTATCGGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCATCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCt                                                                   <  1:1063163/140‑1 (MQ=255)
                                                                       tgatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACAGGATCGATGCATTGAGCtt                                                                  >  1:859712/1‑143 (MQ=255)
                                                                              cccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTACATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCt                                                           >  2:1037741/1‑143 (MQ=255)
                                                                               ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACACATATTGCGCAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATccaa                                                          >  1:998894/1‑141 (MQ=255)
                                                                               ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAAACAGCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATccaa                                                          >  1:1005220/1‑141 (MQ=255)
                                                                                   ttCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGGGCTTTCAGCATATaaa                                                      >  1:781925/1‑143 (MQ=255)
                                                                                      tATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCGTTGAGCTTTCGTCCTGTGGaatt                                                   >  2:230688/1‑143 (MQ=255)
                                                                                      gccggCTCCAGAGGACAAACACGATCTCGTATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAaatt                                                   <  2:740201/140‑1 (MQ=255)
                                                                                       aTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCGTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAaatta                                                  <  1:1087119/143‑1 (MQ=255)
                                                                                        tGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCAGTGAGCTTTAATCCTATGAaagtaa                                                 >  1:379129/1‑143 (MQ=255)
                                                                                              cAGATGAGAAAGCTGATCTCATAGCAGGGACTGGTTCGCACCTTCCATAACGCGGTAGCCACCAGAACAGATATGGCGGAACGACAAAGAGAAACAGAACCAGAGTGATGCATTGAGCTTGCATCCTATGAAATTAATTGCTg                                           <  2:401215/143‑1 (MQ=255)
                                                                                                    aCAAGCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTaaaa                                     <  1:787282/143‑1 (MQ=255)
                                                                                                    aCAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTTTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTaaaa                                     <  2:421577/143‑1 (MQ=255)
                                                                                                      aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAACAGc                                   >  1:1132855/1‑143 (MQ=255)
                                                                                                      aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGc                                   >  2:732737/1‑143 (MQ=255)
                                                                                                        aCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGGACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAt                                 >  2:329066/1‑143 (MQ=255)
                                                                                                        aCATGACCTCATATCAGTGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGTTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAt                                 <  1:780613/143‑1 (MQ=255)
                                                                                                         cATGATCTCATATCAGGGACTTGTTCGCACCATCCATAACGCTGTAGCCACCAGAACAGATATTGCGGGACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGATGTTAAAAGCAtt                                >  2:1160209/1‑143 (MQ=255)
                                                                                                           tGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTgg                              >  1:283529/1‑143 (MQ=255)
                                                                                                            gATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACGAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTggg                             >  1:745788/1‑143 (MQ=255)
                                                                                                             aTCTAATATCAGGGACTTGTTCGCACCTTCCATAACGCAGTAGCCACAAGAACAGATATTGCGGCAAGCCAAAGAGACACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGt                            >  2:248077/1‑143 (MQ=255)
                                                                                                              gctcagtccAGGGTCTTGTTCGCACCTTCCATAACGGTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTa                           <  1:1086156/135‑1 (MQ=255)
                                                                                                               gctagagcAGGGACTTGTTTGCACGTTCGATACCGCGGTAGCCACCCGAGCAGATATTGCGGAACGACCAAGAGAATCAGTACCAGATTGATGCATGGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTAc                          <  1:987930/136‑1 (MQ=255)
                                                                                                                tcATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACa                         <  2:825984/143‑1 (MQ=255)
                                                                                                                  atatCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGa                       >  2:861497/1‑143 (MQ=255)
                                                                                                                       aGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGACCGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATa                  <  2:534907/143‑1 (MQ=255)
                                                                                                                         gcactggtgagCACCTTCCACAACGCGGTAGCAAAACAAGTATATATTTCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATAcc                <  1:1121536/133‑1 (MQ=255)
                                                                                                                           aCTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCa              <  2:63960/143‑1 (MQ=255)
                                                                                                                           aCTTGTTCGCACCGTCCATAACGCTGTAGCCACCAGAACAGATAGTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCa              <  1:726349/143‑1 (MQ=255)
                                                                                                                             ttGTTCGCACCTTCTATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAAACAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGCGTACAGAAAATACCCATa            >  1:473591/1‑143 (MQ=255)
                                                                                                                             ttGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGCACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTACTGTTAAAAGCCTTCTGTACAGAACATACCAATa            >  1:1141814/1‑143 (MQ=255)
                                                                                                                             ttGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAGCCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAACACACATa            >  1:582391/1‑143 (MQ=255)
                                                                                                                             ttGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATa            <  2:379129/143‑1 (MQ=255)
                                                                                                                                   gCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCa      <  1:729542/143‑1 (MQ=255)
                                                                                                                                       cTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAGAATACCAATAGGTCAATAcc  >  1:952922/1‑143 (MQ=255)
                                                                                                                                           |                                                                                                                                          
GAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACC  >  NC_000913/2289972‑2290249

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.