New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3423374 =85 (1.280)8 (0.120) 7/280 7.9 8.7% intergenic (+182/+47) yhdZ/rrfF putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon
?NC_000913 3423663 = NA (NA)intergenic (‑10/+3) thrV/rrfD tRNA‑Thr/5S ribosomal RNA of rrnD operon
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGG  >  NC_000913/3423235‑3423515
                                                                                                                                           |                                                                                                                                             
ggtcTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATaa                                                                                                                                            <  2:1155448/140‑1 (MQ=255)
  tcTTGCGCTTGGTTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATaaaa                                                                                                                                          <  1:611019/142‑1 (MQ=255)
  ccTTTCTCTTGATTTGATGTCTCGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCACATCGCGACAGTGTTCACCGACAAACAACAGATaaaa                                                                                                                                          <  1:413161/143‑1 (MQ=14)
       cGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACaaaa                                                                                                                                     <  1:375145/143‑1 (MQ=255)
        gCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGCGAGTCTTCACCGACAAACAACAGATAAAACAAAAg                                                                                                                                    >  1:811774/1‑143 (MQ=255)
           tgatttgatGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAAGCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGcc                                                                                                                                 >  2:606255/1‑143 (MQ=255)
                  atGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGCATTGGTCCTACTCGGTGGTGTGTGGACCCACCACCAACCGATATACCGAAAGGCCCAggcgc                                                                                                                          >  1:509180/1‑139 (MQ=11)
                      cTGGCACTTTATGGCGCGCGTCCGGCCCGCCCCCCTCCGCGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTCCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGa                                                                                                                      <  2:272659/143‑1 (MQ=11)
                       tGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGCGAGCGTTCACCGACAAACAACAGATCAACCACCAGGCCCCGTCCTCCCAc                                                                                                                     >  1:419675/1‑143 (MQ=11)
                       tGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGAc                                                                                                                     >  1:989130/1‑143 (MQ=37)
                       tGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGGGTTCACCGACCAACAACAGATACAACAACAGGCCCAGCGTTCCGAc                                                                                                                     >  1:179263/1‑143 (MQ=11)
                        ggCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGCGTGTTCACCGACAAACAACCGATAAAACCAAAGGCCCAGTCATCCGagc                                                                                                                    >  1:670989/1‑141 (MQ=255)
                         gCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGCGAGTGTTCACCGCCACACAACCGCTAAAACAAAAGGCCCAGTCCTCCGCCTg                                                                                                                   >  1:532928/1‑143 (MQ=11)
                         gCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTg                                                                                                                   >  2:478519/1‑143 (MQ=38)
                          cggTTTATGGCGGGCGTCCTGCCCGCCACCCCCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGa                                                                                                                  <  2:556636/141‑1 (MQ=255)
                             tttATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAGACATCAAATAAAACAAAAGGCTCAGTcggaagactgggcc                                                                                                               <  2:866847/143‑14 (MQ=14)
                               caTGGCGTGCGTCCTGCCCGCCACCATCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCtt                                                                                                             <  2:697909/142‑1 (MQ=255)
                                aTGGCGCGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCttt                                                                                                            <  1:602256/143‑1 (MQ=38)
                                  ggcgggcgTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTg                                                                                                          >  2:1040500/1‑143 (MQ=40)
                                   gcgggcgCCCTGCCCGCGACCCGCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGt                                                                                                         <  2:816195/143‑1 (MQ=255)
                                     gggcgTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGttt                                                                                                       <  2:418021/143‑1 (MQ=255)
                                     gcgggggcTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCGCCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGttt                                                                                                       <  1:233236/136‑1 (MQ=255)
                                       gcaggacgCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGGTTTGTCCTCCTCGGGAGAGCGTTCACCGACAAACAACCGATAAAACAAAAGGCCCGGTCCTCCGCCTCAGCCCTTTGTTCTa                                                                                                     >  1:750965/8‑143 (MQ=11)
                                           ccTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGCGCCTTTTGTTTTATTTg                                                                                                 >  2:901443/1‑143 (MQ=255)
                                           ccTGCCCCCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAACCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTg                                                                                                 <  2:780364/143‑1 (MQ=255)
                                               cccGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGt                                                                                             >  1:626019/1‑143 (MQ=40)
                                                 cGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCt                                                                                           >  2:350409/1‑143 (MQ=255)
                                                   ccACCCTGCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTgg                                                                                         <  2:1048548/143‑1 (MQ=255)
                                                   ccACCCTCCGGGCCGTTGCTTCGCCACGTTCAACTTCGGCAACACCGGATGTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTgg                                                                                         <  2:1143919/143‑1 (MQ=14)
                                                   ccACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTgg                                                                                         <  2:979335/143‑1 (MQ=255)
                                                   ccACCCCCCGGGCCGTTGCTTCGCCACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTgg                                                                                         <  2:985621/143‑1 (MQ=255)
                                                      cccTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGCTTTGTCCTACTCGGGCCACTGTTCACCGACAAACACCAGATAAACCAACAGCCCCAGTCTTCCTACTGAGCCTTTTGCTTTCTTTCATGTCTGCCAg                                                                                      >  2:763523/1‑143 (MQ=14)
                                                       ccTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGAAAAACAACAGATAAAACAAAAGGCCCAGACTTGCTAAAGTGCCTTCTGTTTTATTTGAGGGCTGGCAgc                                                                                     >  1:507871/1‑142 (MQ=14)
                                                         tCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAACCAAAAGGCCCAGTCCTCCGACTGAGCCTTTTGTTTTATTTGCTGTGTGGCAGtac                                                                                   >  1:250945/1‑141 (MQ=255)
                                                          ccGTGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTcc                                                                                  <  1:369430/143‑1 (MQ=255)
                                                          ccGGGCCGGTGCTGCGGAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTcc                                                                                  <  2:94440/143‑1 (MQ=255)
                                                             ggCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTAGCTATATTTGATGTCTGGCAGTTCCCTa                                                                               >  1:304051/1‑143 (MQ=255)
                                                               ccGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAACAGGCCCAGTCTTCCGACTGAGCCTTTTGTGTTATTTGATGTCTGGCAGTCCCCTAct                                                                             >  1:302772/1‑143 (MQ=255)
                                                                 gTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACACAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGGTGTCTGGCAGTTCCCTActcc                                                                           >  2:32086/1‑142 (MQ=255)
                                                                 gTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCCActct                                                                           >  2:913021/1‑143 (MQ=255)
                                                                  ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACtctc                                                                          >  2:974493/1‑143 (MQ=255)
                                                                  ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACtctc                                                                          >  1:150395/1‑143 (MQ=255)
                                                                    gCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGc                                                                        >  2:46025/1‑143 (MQ=255)
                                                                      ttCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGCTCCCTACTCTCGCAt                                                                      >  1:649919/1‑143 (MQ=255)
                                                                         gCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATggg                                                                   <  1:967231/143‑1 (MQ=255)
                                                                         gCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATggg                                                                   <  1:151677/143‑1 (MQ=255)
                                                                         gCAACGTTCAAATCCGCCCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATggg                                                                   <  2:109632/143‑1 (MQ=255)
                                                                         gCAACGTGCAAATGCGCTCCCGGCGGATTTGTCCTACGCGGGAGAGTGTTCACCGACAATCAACATATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATggg                                                                   <  1:464626/143‑1 (MQ=14)
                                                                           aacggacAAAGCCGCTCCCGGCGGATTTGTCCGACGCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTCACGCCTTAGCCTTGTGTTTGAGTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGga                                                                 <  1:824836/137‑1 (MQ=14)
                                                                             cGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGTGCCTTTTGTTTTATTTGAGGTCTGGCAGTTGCCTACTCTCGCATGGGgaga                                                               <  1:606255/143‑1 (MQ=255)
                                                                              gTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGgaggc                                                              >  2:833635/1‑141 (MQ=255)
                                                                              gTTCAAAGCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGAc                                                              <  2:419675/143‑1 (MQ=255)
                                                                               ttCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGAcc                                                             >  1:806176/1‑143 (MQ=255)
                                                                               ttCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCCTTTGTTTTATTTGCTGTCTGGCAGTTCCCTACTCTCGCATGGGGAGGcc                                                             >  1:692655/1‑143 (MQ=255)
                                                                                  aaaTCCGCTCCCGGCGGATTTGTCCTACTCGGGCGAGTGGTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCca                                                          <  2:586442/143‑1 (MQ=255)
                                                                                    aTCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACCGAGCCTCTTGTTTTATTTGATGCCTGGCAGTTCCCTACTTTCGCATGGGGAGACCCcaca                                                        >  1:287211/1‑143 (MQ=255)
                                                                                        gCTCCCGGCGGATTTGCCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGAAATAACTTTCGACTGAGTCTTGTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTAc                                                    <  2:537343/143‑1 (MQ=14)
                                                                                            ccGGCGGATTTGTCCTACCCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATc                                                <  2:274389/143‑1 (MQ=255)
                                                                                            ccGGCGAATTTGTCCTACTCGGGAGAGTGTTCACCGACGAGCAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATc                                                <  2:959977/143‑1 (MQ=255)
                                                                                             cggcggATGTGTCCTACGCGGGATAGTGTTCACCGCCAACCAGTCTCGCCAGCAAAAGGACCAGTCTTCCGACTGCGCCTTTTGTTTTATTTCACGTCGGGTAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCg                                               <  1:458887/143‑1 (MQ=9)
                                                                                              ggcggATTTGTCCTACGCGGGATAGTGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCgg                                              <  1:1131197/143‑1 (MQ=255)
                                                                                                         ccTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGgtgt                                   <  1:1109250/143‑1 (MQ=255)
                                                                                                          cTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAACGTCCCAGTCTTCCGTCTGTCCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGtt                                  <  2:429646/143‑1 (MQ=14)
                                                                                                           tACTCGGGAGAGTGTTCACCGACAAACAACAGATTAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGttt                                 <  1:104426/143‑1 (MQ=255)
                                                                                                           tACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCTCAGTCTTCCGACTGAGCCTTTTGTTTGAGTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGttt                                 <  1:939239/143‑1 (MQ=255)
                                                                                                             cTCGGTAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCa                               <  1:149157/143‑1 (MQ=255)
                                                                                                             cTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACGCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCa                               >  1:234862/1‑143 (MQ=255)
                                                                                                               cGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTCCCATCCGCGCTACGGCGATTCAcc                             >  1:327020/1‑142 (MQ=255)
                                                                                                                 ggAGAGGGTGCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTc                           <  2:444206/143‑1 (MQ=255)
                                                                                                                  gagaGTGTTCACCGACAAACAACAGATAAAACAGCAGGCGCAGTCTTCCGACTGAGCCTCGTGTTTTATTTGAGGTCTGGCCGTTCCCTACTCTCGCATGGGGAGACCCCCGCGTACCACCGGCGCTCCGGCGGTTGACctct                          >  1:511081/1‑143 (MQ=14)
                                                                                                                  gagaGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCt                          >  2:214114/1‑143 (MQ=255)
                                                                                                                    gagTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGa                        <  2:742156/143‑1 (MQ=255)
                                                                                                                    cagTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCCGTTACCGCCTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGa                        <  2:789817/142‑1 (MQ=255)
                                                                                                                     agTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTGTTGTTTTATATGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGCAGCCACACTACTATCGGCGATACGGCGTTTCACTTCTGAg                       >  1:1089564/1‑143 (MQ=14)
                                                                                                                       tgtTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGtt                     <  1:1040500/143‑1 (MQ=40)
                                                                                                                        tctCACCCACAAACCAGAGATAAAACAGAAGGCCCAGTCTTCCGACTGCGCCTTTTGTTTTATTTGATGTCTCGCAGTTCCCTACTCTCGCCTGGGTAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTc                    <  2:257506/141‑1 (MQ=14)
                                                                                                                        gtTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTc                    <  2:1046006/143‑1 (MQ=40)
                                                                                                                         ttCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGCCTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGATTCACTTCTGAGTCCg                   >  2:561404/1‑143 (MQ=255)
                                                                                                                         tctaCCGACAAACAACAGATATATCTAATGGTCCAGTCATCAGACTGAGACGTTTGATTCATTTGATGTCTGGCAGTTCACGACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCg                   <  2:412623/140‑1 (MQ=11)
                                                                                                                          tCACCGACAGACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCgg                  <  1:171117/143‑1 (MQ=255)
                                                                                                                            aCCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCa                >  2:16862/1‑143 (MQ=255)
                                                                                                                            aCCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCa                <  2:989130/143‑1 (MQ=255)
                                                                                                                                acaaacaaCAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATggg            <  2:1002788/143‑1 (MQ=40)
                                                                                                                                   aacaacAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTCCGGCATGGGGTc         >  1:533707/1‑143 (MQ=255)
                                                                                                                                          gATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCAACACTACCATCGGCGCTACGGCGGTTCGCTCCTGAGTACGTCATGGGGGCAgggggg  >  1:521589/1‑143 (MQ=14)
                                                                                                                                           |                                                                                                                                             
GGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGG  >  NC_000913/3423235‑3423515

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.