New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3423374 =85 (1.280)8 (0.120) 7/280 7.9 8.7% intergenic (+182/+47) yhdZ/rrfF putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon
?NC_000913 3423663 = NA (NA)intergenic (‑10/+3) thrV/rrfD tRNA‑Thr/5S ribosomal RNA of rrnD operon
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTT  >  NC_000913/3423521‑3423794
                                                                                                                                              |                                                                                                                                    
cgcgCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGAGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAAtt                                                                                                                                      >  2:939278/1‑143 (MQ=255)
  cgcTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTg                                                                                                                                   <  2:287211/143‑1 (MQ=255)
  cgcTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTg                                                                                                                                   >  2:1051626/1‑143 (MQ=255)
   gcTACCGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAATAAGTGGTGCTGATACCCAGAGTCGAACTGGGGAACTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGa                                                                                                                                  <  2:181876/143‑1 (MQ=255)
    gtACTGCCGCCGGACAAATTCTTTTCTAATCTGCCGAAGTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGAt                                                                                                                                 <  2:522488/142‑1 (MQ=255)
    cTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGAt                                                                                                                                 <  2:250945/143‑1 (MQ=255)
        tGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTCTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGCGCCATATCAGCACGCTAAATTTGATGCCt                                                                                                                             <  1:1040621/143‑1 (MQ=255)
         gccgccAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTg                                                                                                                            >  2:814509/1‑143 (MQ=255)
          ccgccAGACATATTCCCTTCTAATCTGCCGAACTTTAACCGAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTgg                                                                                                                           <  1:561404/143‑1 (MQ=255)
            gccAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAAGTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCa                                                                                                                         >  2:156201/1‑143 (MQ=255)
             ccAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATCTCAGCACGCTCAACTTGaacccccccag                                                                                                                        >  2:205736/1‑133 (MQ=37)
               aGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGtt                                                                                                                      <  2:179263/143‑1 (MQ=255)
               aGACAAATTCGTTGCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAgct                                                                                                                      >  1:471306/1‑141 (MQ=255)
                 aCAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCCGGCAGTTcc                                                                                                                    >  2:665388/1‑143 (MQ=255)
                  cgaagtctttcacaaTCTGGCGATCTGTAACCGAAAAAGTGGTGCTGATACCCAGAGGCGAACTGGGGACCTCACCCTTACTAATGGTGTGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTccc                                                                                                                   <  1:970261/130‑1 (MQ=255)
                   aaaTTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCt                                                                                                                  >  2:1000437/1‑143 (MQ=255)
                   aaaTTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCACCCCGCTACATTTGATGCCTGGCAGTTCCCt                                                                                                                  >  1:53101/1‑143 (MQ=255)
                      ttCTTTTCTAATCTGCCGATCTTTAACCTAAAAAGTGGTGTTTATTTTTTGTGTTCTGTGCTTAACGGTACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTAct                                                                                                               <  2:844802/143‑1 (MQ=16)
                      ttCTTTTCTAATCTGACGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGCGCCATATCAGCACGCCAAATTTGAGGCCTGGCCGTTCCCTAct                                                                                                               >  2:402462/1‑143 (MQ=37)
                       tcttctCTACTCTGCCCAACTCTAACCTGCGAATTGGGGCTTATCCCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTActc                                                                                                              <  2:1089564/143‑1 (MQ=25)
                         ttttCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACgctc                                                                                                            >  2:578143/1‑143 (MQ=255)
                              tAATCCGCCCAACTTTAACCTCAAAAGTGCTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATg                                                                                                       <  2:1011614/143‑1 (MQ=255)
                               aaTCTGTCGAACTGTAACCTACAACGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATgg                                                                                                      <  1:833635/143‑1 (MQ=255)
                               aaTCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATgg                                                                                                      <  2:521589/143‑1 (MQ=255)
                               aaTCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATgg                                                                                                      <  2:670989/143‑1 (MQ=255)
                                aTCTGCCGAACTTTAACCTAAAAAGTGGTGCTGCTAGCCGGAGTCGACCTGGGGGCTGCTACTTCGTGACTGGTGTTCACTACTGTGCTCGTCATATCTGCTCGTTTAATTTGATGCCTGGCAGTTCCCTACTCTCGCATggg                                                                                                     <  2:467757/143‑1 (MQ=9)
                                aTCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGCGGCGAACTGGGGACCTCACCCTGACCAAGGGTGTGCTCTACCAACTGAGCAATGTCAGCAAGCTAAATTGGATGCGTGGCAGTACCCGACTCTCGCATggg                                                                                                     >  2:182850/1‑143 (MQ=255)
                                         aCTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCca                                                                                            <  2:150395/143‑1 (MQ=255)
                                           tttAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCcaca                                                                                          <  2:811774/143‑1 (MQ=255)
                                              aaCCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTa                                                                                       <  2:589477/143‑1 (MQ=255)
                                                  tAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGCCAGTTCCCTACTCTCGCATGGGGAGACCCCACACGAccct                                                                                   >  1:168930/1‑141 (MQ=255)
                                                  tAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGACTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCag                                                                                   >  2:451577/1‑142 (MQ=255)
                                                             ggtGATACCCAGAGTCGAACTGGGCACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACgg                                                                        <  2:692655/141‑1 (MQ=255)
                                                             gCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACgg                                                                        >  2:339703/1‑143 (MQ=255)
                                                             gCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCCCGCATGGGGAGGCCCCACCCTACCATCGGCGCTACgg                                                                        >  2:1116697/1‑143 (MQ=255)
                                                                     ccAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCAc                                                                >  2:613217/1‑143 (MQ=255)
                                                                       agagTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACtt                                                              >  2:1011142/1‑143 (MQ=255)
                                                                       agagTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGAGGAGACCCCACACTACCATCGGCGCCACGGCGTTTCACtc                                                              >  1:610202/1‑142 (MQ=255)
                                                                       agagTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTAATACCGCAGGTGGAGACGACATACTACCATCGGCGCTACGGCGGCTCACtt                                                              >  1:10884/1‑143 (MQ=25)
                                                                       agagTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGATAAACCAAAGCTCCCATTGCAGGGCGCTGACTTGTTATGCCTGCAGTTCCCTACTCTCGCCAGGGGCGGCCCCACACTACCATCGACGCTACGGCGTTTCCCtt                                                              >  2:538425/1‑143 (MQ=255)
                                                                             gAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTAAGt                                                        >  2:589502/1‑143 (MQ=255)
                                                                              aaCTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGtt                                                       >  2:380851/1‑143 (MQ=255)
                                                                              aaCTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGtt                                                       <  2:806176/143‑1 (MQ=255)
                                                                                 tgggctacTCACGCTTACCAAGTGTGCGCGCGCCCAACTCAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCACTACTCTCGCATGGGGAGACCCCACACTTCCATCGGCGCTACGTCGTTTCACTTCTGAGTTCgg                                                    <  2:479760/136‑1 (MQ=17)
                                                                                 tGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACGACCACCGGCGCTACGGCGTTCCCCTCCAGAGTTccg                                                    >  1:621543/1‑141 (MQ=25)
                                                                                      tccTCGCACTTAGCAAGGGTGCGCTCTACCAACTGAGTCATATCAGCATGCTAAATTTGATGCCTGGCAGTTCCCGACTCTCGCATGGGGAGACCCTATTCTACCATCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATgg                                               <  1:1038301/142‑1 (MQ=18)
                                                                                      aCCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg                                               >  2:865930/1‑143 (MQ=255)
                                                                                        cTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCCCTTCTGAGTTCGGCGTgggg                                             >  2:190909/1‑143 (MQ=255)
                                                                                        cTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgggc                                             >  2:148151/1‑142 (MQ=255)
                                                                                               ttACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTCCTGAGTTCGGCATggggccgggcg                                      >  1:586653/1‑136 (MQ=255)
                                                                                                tACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCAGCAGGGGGTAGGGTgg                                     >  1:505525/1‑143 (MQ=255)
                                                                                                   cAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGCCGCTACGGCGTTTCACTTCTGAGTCCGGCACGGGGCCAGGTGGGac                                  >  1:806673/1‑143 (MQ=255)
                                                                                                          gcgcTCTGCCTACTGTGCCGTATCAGCACGCTAGTTTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACGTCTGAGTTCGGCATGGGGTCAGGTGGGACCACcgcg                           <  1:665388/143‑1 (MQ=14)
                                                                                                          gcgcTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGCGTTCGGCATGGGGTCAGGTGGGACCACcgcg                           >  2:867664/1‑143 (MQ=255)
                                                                                                           cgcTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGACTTCGGCACGGGGCCAGGTGGGACCACCgcgc                          >  1:1087444/1‑143 (MQ=255)
                                                                                                            gcTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGCGTTCGGCATGGGGCCAGGTGGGACCACCGCGCt                         >  2:300062/1‑143 (MQ=255)
                                                                                                            gcTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCt                         >  2:635490/1‑143 (MQ=255)
                                                                                                            gcTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCt                         <  1:339703/143‑1 (MQ=255)
                                                                                                                tACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACgg                     >  1:25677/1‑143 (MQ=255)
                                                                                                                    aaCTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCGGCTGCGCCCACCGCGCTCCcgccgc                 >  1:787787/1‑143 (MQ=17)
                                                                                                                    aaCTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGgccgc                 >  2:1116823/1‑143 (MQ=255)
                                                                                                                    aaCTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGACAGGTGGGAACACCGCGCTACGgccgc                 >  2:407648/1‑143 (MQ=255)
                                                                                                                      cTGCGCCATATCAGCACGCTAAACTTGATGCCTGGCAGTTCCCTACGCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCa               <  2:53101/143‑1 (MQ=255)
                                                                                                                              tatCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAAtt       <  2:621543/143‑1 (MQ=39)
                                                                                                                                   gCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATCGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTggt  >  2:321216/1‑141 (MQ=25)
                                                                                                                                              |                                                                                                                                    
CGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTCTCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTT  >  NC_000913/3423521‑3423794

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.