| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 2 (0.030) | 43 (0.650) | 37/284 | 1.0 | 95.6% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 2 (0.030) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
AGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTAT > NC_000913/4001502‑4001769 | aGTATGGGTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGCCGACGGCCTGCATc < 2:410063‑M1/143‑2 (MQ=255) aTGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc < 2:878070‑M1/143‑5 (MQ=255) gATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCCGATGCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttc > 1:17898‑M1/1‑136 (MQ=255) gATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttc > 2:532202‑M1/1‑136 (MQ=255) tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttc > 2:215246‑M1/1‑130 (MQ=255) tCTGGTGGAACCGGACGACGACGCGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttc < 2:222698‑M1/143‑14 (MQ=255) tggtcGAACCGTACGACGCCGAGCGCCTGCGCGTACAAGCTGAACTTTGCCAGAGCCTGGCACCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctt < 1:485760‑M1/141‑16 (MQ=255) gTCGAATCACACGACGACGAGCGACTGCTCGTACAATCTGAACTTGTCCATAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttg < 2:336622‑M1/143‑18 (MQ=255) tCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctctttcttcttctttga > 2:217558‑M1/1‑125 (MQ=255) tCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttga > 2:418098‑M1/1‑125 (MQ=255) gcgAGCCGGACGACGACGGGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACGGGAAGACAGCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttga < 1:1037688‑M1/142‑19 (MQ=255) gcgAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttga < 1:650826‑M1/142‑19 (MQ=255) gAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttctccttcctcgaag > 1:613102‑M1/1‑123 (MQ=255) ggcGACTGGGCGTACAAACTGACCTTGGGCAGAGCCGGGGAAGCCGCGCGGAACTGGAAGACATCGAAGCATCGGCAGGTTTCTTTGAAGACGACGACGGCCTGCATctccgtcttcttctttgaagatgcggaagatcacgc < 1:158480‑M1/142‑37 (MQ=255) ctgcggcgcgtacaATCTGAACTTGGCCAGGGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCTTCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctgcttcttctttgaagatgcggaagatcacgccg < 1:440231‑M1/138‑39 (MQ=255) gACTGCGCGTACAATCTGAACCTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccgg < 1:983517‑M1/143‑40 (MQ=255) cgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGCAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtcactcc > 2:218523‑M1/1‑97 (MQ=255) aCAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccact < 2:772332‑M1/143‑50 (MQ=255) aaTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgccgatgcggaagatcacgccgggaaccccactgt > 2:839782‑M1/1‑92 (MQ=255) agctgAACGTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcctcttctttgaagatgcggaagatcacgccggtaactccactgtg < 2:457799‑M1/141‑53 (MQ=255) cTGAACTTGGCCAGGGCCTGGCAACCCGCCCGGAACTGGAAGACAGCGAAGCATCGGCACGTTTCTTTGCAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggc < 1:46975‑M1/143‑55 (MQ=255) tGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctcctttgaagatgcggaagatcacgccggtaactccactgtggca < 1:356471‑M1/143‑56 (MQ=255) tctcgcgcagggcctGGCACCCGGCCCGGAACCGGAAGACATCGAAGCATCGGCACG‑TTCTTTGGAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcattta < 1:796373‑M1/136‑60 (MQ=255) ttGGCTAGAGTCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttac < 1:301462‑M1/143‑61 (MQ=255) ccAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatc > 2:441725‑M1/1‑79 (MQ=255) gactcgcaaccCGCCCGGAACGGGAAGACATCGCAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATcaccttctgcttctttgaagatgcggaagatcacgccggtaacgccactgtggcatttaccatccgtga < 2:728178‑M1/138‑70 (MQ=255) ccTGGCAACCCGCCCGGAACTGGAAGACATAGAAGAATCGGCACTTTTCTTTGAAGACGACGACGGCCTGCATTTT‑‑‑‑‑CGTCGTCTTGGTTGAAGTTGCGGAAGATCACGCCGTGAACTCGACTGTGGCAGTTACTATCCGTGAt > 1:21175/1‑143 (MQ=255) cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccacagtgccatttaccatccgtgatg < 1:414951‑M1/143‑72 (MQ=255) gCAACCCGCCCGGAACTGGAAGACATCGCAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATgtccttcttcttcttcgaagatgcggaagatcacgccggtaactccaccgtggcatgcaccaaccgcgatggcc > 1:811401‑M1/1‑69 (MQ=255) gccggcgggaacgggaATGCATCGAAGCCTCGGCACGTTTCTTTGACGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactctactgtggcatttaccatccgtgatggtcgtct < 1:44713‑M1/136‑79 (MQ=255) gcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtcttct > 2:1110882‑M1/1‑62 (MQ=255) gcaaGCCAGCGACGCGTCTGGACGTTTCGTGGAGGACGACGACGGCCTGCGT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGATGCTCACGCCGGTAACTCCACTGTGGCATTTACCAACCGTGATGGTCGTCTGTTGACTCTgcgt < 1:368956/141‑1 (MQ=255) aaggcatgcaagcatcggaaCGGTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggacgatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtga < 2:377058‑M1/134‑94 (MQ=255) aaGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggacgatcacgccggtaactccactgtggcatttaccattcgtgatggtcgtctgtttactctgcgtgagcgtgaact > 2:800359‑M1/1‑41 (MQ=255) aaGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaact < 1:418098‑M1/143‑103 (MQ=255) cGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgc > 2:313910‑M1/1‑35 (MQ=255) ggCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttgtttgaagatgcggaagatgacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgct > 2:825901‑M1/1‑34 (MQ=255) cACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttt > 1:396987‑M1/1‑32 (MQ=255) cACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccacagtggcatttaacatccgtgatggtcgtccgtttactctgcgtgagcgtgacctgcccactgt > 1:801893‑M1/1‑32 (MQ=255) tCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct < 2:625891‑M1/143‑118 (MQ=255) tGAAGACGACGCCGGCCTGCCTctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtan < 1:592754‑M1/143‑122 (MQ=255) tGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtag > 2:686397‑M1/1‑22 (MQ=255) acgacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtacctccactgtggcatctaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat < 2:901749‑M1/143‑127 (MQ=255) acgacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtac > 2:542577‑M1/1‑17 (MQ=255) acgacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgggaactgcccgcttttcgtccgtctggtac > 1:961511‑M1/1‑17 (MQ=255) | AGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTAT > NC_000913/4001502‑4001769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |