| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 2 (0.030) | 43 (0.650) | 37/284 | 1.0 | 95.6% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 2 (0.030) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGT > NC_000913/4001507‑4001791 | agtatgggttgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgccgacggcctgcatc < 2:410063‑M2/1‑1 (MQ=255) atggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc < 2:878070‑M2/4‑1 (MQ=255) gattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggcccgatgctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttc > 1:17898‑M2/137‑143 (MQ=255) gattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttc > 2:532202‑M2/137‑143 (MQ=255) tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttc > 2:215246‑M2/131‑143 (MQ=255) tctggtggaaccggacgacgacgcgcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttc < 2:222698‑M2/13‑1 (MQ=255) tggtcgaaccgtacgacgccgagcgcctgcgcgtacaagctgaactttgccagagcctggcaccccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttctt < 1:485760‑M2/15‑1 (MQ=255) gtcgaatcacacgacgacgagcgactgctcgtacaatctgaacttgtccatagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTg < 2:336622‑M2/17‑1 (MQ=255) tcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCTTTCTTCTTCTTTGa > 2:217558‑M2/126‑143 (MQ=255) tcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGa > 2:418098‑M2/126‑143 (MQ=255) gcgagccggacgacgacgggcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaacgggaagacagcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGa < 1:1037688‑M2/18‑1 (MQ=255) gcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGa < 1:650826‑M2/18‑1 (MQ=255) gaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTCCTTCCTCGAAg > 1:613102‑M2/124‑143 (MQ=255) ggcgactgggcgtacaaactgaccttgggcagagccggggaagccgcgcggaactggaagacatcgaagcatcggcaggtttctttgaagacgacgacggcctgcatCTCCGTCTTCTTCTTTGAAGATGCGGAAGATCACGc < 1:158480‑M2/36‑1 (MQ=255) ctgcggcgcgtacaatctgaacttggccagggcctggcaacccgcccggaactggaagacatcgaagcttcggcacgtttctttgaagacgacgacggcctgcatCTCCTGCTTCTTCTTTGAAGATGCGGAAGATCACGCCg < 1:440231‑M2/38‑1 (MQ=255) gactgcgcgtacaatctgaacctggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCgg < 1:983517‑M2/39‑1 (MQ=255) cgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgcagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTCACTcc > 2:218523‑M2/98‑143 (MQ=255) acaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACt < 2:772332‑M2/49‑1 (MQ=255) aatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGCCGATGCGGAAGATCACGCCGGGAACCCCACtgt > 2:839782‑M2/93‑143 (MQ=255) agctgaacgtggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCCTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg < 2:457799‑M2/52‑1 (MQ=255) ctgaacttggccagggcctggcaacccgcccggaactggaagacagcgaagcatcggcacgtttctttgcagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGc < 1:46975‑M2/54‑1 (MQ=255) tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTCCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCa < 1:356471‑M2/55‑1 (MQ=255) tctcgcgcagggcctggcacccggcccggaaccggaagacatcgaagcatcggcacgttctttggagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTa < 1:796373‑M2/59‑1 (MQ=255) ttggctagagtctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTAc < 1:301462‑M2/60‑1 (MQ=255) ccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATc > 2:441725‑M2/80‑143 (MQ=255) ccTGGCAACCCGCCCGGAACTGGAAGACATAGAAGAATCGGCACTTTTCTTTGAAGACGACGACGGCCTGCATTTT‑‑‑‑‑CGTCGTCTTGGTTGAAGTTGCGGAAGATCACGCCGTGAACTCGACTGTGGCAGTTACTATCCGTGAt > 1:21175/1‑143 (MQ=255) gactcgcaacccgcccggaacgggaagacatcgcagcatcggcacgtttctttgaagacgacgacggcctgcatCACCTTCTGCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACGCCACTGTGGCATTTACCATCCGTGa < 2:728178‑M2/69‑1 (MQ=255) ctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACAGTGCCATTTACCATCCGTGATg < 1:414951‑M2/71‑1 (MQ=255) gcaacccgcccggaactggaagacatcgcagcatcggcacgtttctttgaagacgacgacggcctgcatGTCCTTCTTCTTCTTCGAAGATGCGGAAGATCACGCCGGTAACTCCACCGTGGCATGCACCAACCGCGatggcc > 1:811401‑M2/70‑141 (MQ=255) gccggcgggaacgggaatgcatcgaagcctcggcacgtttctttgacgacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCTACTGTGGCATTTACCATCCGTGATGGTCGTCt < 1:44713‑M2/78‑1 (MQ=255) gcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCgtcttct > 2:1110882‑M2/63‑140 (MQ=255) gcaaGCCAGCGACGCGTCTGGACGTTTCGTGGAGGACGACGACGGCCTGCGT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGATGCTCACGCCGGTAACTCCACTGTGGCATTTACCAACCGTGATGGTCGTCTGTTGACTCTgcgt < 1:368956/141‑1 (MQ=255) aaggcatgcaagcatcggaacggttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGACGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtga < 2:377058‑M2/93‑1 (MQ=255) aagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGACGATCACGCCGGTAACTCCACTGTGGCATTTACCATTCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACt > 2:800359‑M2/42‑143 (MQ=255) aagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACt < 1:418098‑M2/102‑1 (MQ=255) cggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGc > 2:313910‑M2/36‑143 (MQ=255) ggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTGTTTGAAGATGCGGAAGATGACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCt > 2:825901‑M2/35‑143 (MQ=255) cacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCttt > 1:396987‑M2/33‑143 (MQ=255) cacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACAGTGGCATTTAACATCCGTGATGGTCGTCCGTTTACTCTGCGTGAGCGTGACCTGCCCactgt > 1:801893‑M2/33‑141 (MQ=255) tctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt < 2:625891‑M2/117‑1 (MQ=255) tgaagacgacgccggcctgcctCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGtan < 1:592754‑M2/121‑2 (MQ=255) tgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGtag > 2:686397‑M2/23‑142 (MQ=255) acgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTACCTCCACTGTGGCATCTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAt < 2:901749‑M2/126‑1 (MQ=255) acgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGtac > 2:542577‑M2/18‑142 (MQ=255) acgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGGGAACTGCCCGCTTTTCGTCCGTCTGGtac > 1:961511‑M2/18‑142 (MQ=255) cTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCCTATGCGTGACCGTAGCCAgg > 2:949066/1‑142 (MQ=255) | GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGT > NC_000913/4001507‑4001791 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |