Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,978,503 Δ776 bp insB1insA insB1, insA

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1978503–1979270 1979278 9–776 72 [1] [0] 70 insB1–insA insB1, insA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 19785021 (0.020)68 (1.080) 48/268 0.2 99.3% intergenic (‑305/+16) flhD/insB1 flagellar class II regulon transcriptional activator, with FlhC/IS1 transposase B
?NC_000913 1979279 = 0 (0.000)intergenic (‑64/‑474) insA/uspC IS1 repressor TnpA/universal stress protein

GGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCT  >  NC_000913/1979141‑1979419
                                                                                                                                          |                                                                                                                                             
ctttacacttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgagcttgtcaataatgcgtgatgcagatcacacaaaacactcaattacttaacctaaatgTATaa                                                                                                                                           >  1:695258‑M2/139‑143 (MQ=255)
ctttacacttacctaagatttttcctaaatcgacgcaactgtactcatcaccacacccacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATaa                                                                                                                                           <  1:692233‑M2/5‑1 (MQ=255)
ctttacacctatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggagctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATaa                                                                                                                                           <  1:62106‑M2/5‑1 (MQ=255)
  ttacacttatctaagatgtttcctaaatcgacgcaactgtactcgtcactacccgcacatacgacggaggggggctgcgattttcaataatgcgtgatgcagatcccacaaaaccctcaattacttagtatagatgtttgggt                                                                                                                                         >  2:286975‑M2/137‑137 (MQ=255)
   tacacttatctaagatttttcctaaatggacggaactgtactcgtgactacacgcacatacagcggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTc                                                                                                                                        <  1:193644‑M2/8‑1 (MQ=255)
      acttatctaagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacacacaattacttaacataaatgTATAAGTCATa                                                                                                                                     >  1:7203‑M2/133‑143 (MQ=255)
            ctaagagttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggccgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttg                                                                                                                              <  2:557836‑M2/17‑1 (MQ=255)
             taagatttttcctacatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgt                                                                                                                             <  1:674063‑M2/18‑1 (MQ=255)
             taagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataactgTATAAGTCATActcttgc                                                                                                                             >  1:671666‑M2/126‑142 (MQ=255)
             taagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgt                                                                                                                             >  2:620255‑M2/126‑143 (MQ=255)
             taagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgt                                                                                                                             >  1:875585‑M2/126‑143 (MQ=255)
             taagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaaccgaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACgtctgt                                                                                                                             >  1:200177‑M2/126‑143 (MQ=255)
              aagatttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACttttgtt                                                                                                                            >  2:508287‑M2/125‑143 (MQ=255)
                 atttttcctaaatcgacgcaactgtactcgtcactacacgcacatacggcggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaccactcaattacttaacattattcTATAAGTCAcacaattgttaat                                                                                                                         >  2:276137‑M2/122‑140 (MQ=255)
                  tttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTgg                                                                                                                        >  2:771943‑M2/121‑143 (MQ=255)
                   ttttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTggg                                                                                                                       >  2:472270‑M2/120‑143 (MQ=255)
                    tttcctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGgt                                                                                                                      <  2:318862‑M2/25‑1 (MQ=255)
                        ctaaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaaatacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTAt                                                                                                                  >  1:1021098‑M2/115‑143 (MQ=255)
                          aaatcgacgcgactgtactcgttactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTCGTTTTGGGTGTAttt                                                                                                                <  1:978828‑M2/31‑1 (MQ=255)
                          aaatcgacgcaactgtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTAttt                                                                                                                <  2:983777‑M2/31‑1 (MQ=255)
                                        gtactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTaaaaa                                                                                                  <  2:133601‑M2/45‑1 (MQ=255)
                                        ggactcgtcactacacgcacacacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTaaaaa                                                                                                  <  2:652874‑M2/45‑1 (MQ=255)
                                         tactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCTATCTGTTAAAAAg                                                                                                 >  1:622958‑M2/98‑143 (MQ=255)
                                         tactcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCACTCTGTTAAAAAg                                                                                                 >  1:1148701‑M2/98‑143 (MQ=255)
                                         tactcgtcactacacgcacatacaacggaggggggctgcgagtttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAg                                                                                                 >  2:503920‑M2/98‑143 (MQ=255)
                                            tcgtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGttt                                                                                              >  1:275245‑M2/95‑143 (MQ=255)
                                              gtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGttttt                                                                                            >  2:742029‑M2/93‑143 (MQ=255)
                                              gtcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGgtttt                                                                                            >  2:156195‑M2/93‑143 (MQ=255)
                                              gtcactacacgcacatacaacggacgggggctgcgattttcaataatgcgcgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTGTTGGGTGTATTTCACTATCTCACAAAgttgtt                                                                                            >  1:1013164‑M2/93‑143 (MQ=255)
                                               tcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTTTTTTGGATGTATTTCAATATGTTAAAAAATTTTTc                                                                                           >  1:736033‑M2/92‑143 (MQ=255)
                                               tcactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTc                                                                                           <  1:418108‑M2/52‑1 (MQ=255)
                                                cactacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAagtttttag                                                                                          >  1:1146177‑M2/91‑141 (MQ=255)
                                                  ctacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTGTAAGTCATACTTTTGTTTTGGGTGTTTTCCAATATAATTAAAAGTTGttcgtt                                                                                        >  1:234528‑M2/89‑141 (MQ=255)
                                                   tacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgcta                                                                                       >  1:305557‑M2/88‑143 (MQ=255)
                                                   tacacgcacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTGGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgcta                                                                                       >  1:1144339‑M2/88‑143 (MQ=255)
                                                       ctagcatgcaacggaggggggcttggattttcaataatgcgcgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcgctacgct                                                                                   <  1:327104‑M2/60‑1 (MQ=255)
                                                        gcacatacaacggagggggcctgcgaatttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGCTTTGGGTGTATTTCATTCTGTTCAAACGTtcttcgatacacct                                                                                  >  1:151272‑M2/83‑139 (MQ=255)
                                                            atacaacggaggggggctgcgattttcaataatgcgtgatgaagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGATagcaa                                                                              >  1:1012945‑M2/79‑143 (MQ=255)
                                                               caacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTagcaagca                                                                           >  1:190215‑M2/76‑143 (MQ=255)
                                                               caacggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTAGTTCAAACTGTTAAAAAGTTTTTCGCTACGCTagcaagca                                                                           >  1:239629‑M2/76‑143 (MQ=255)
                                                                   ggaggggggctgcgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTTAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCaaaaa                                                                       <  2:554259‑M2/72‑1 (MQ=255)
                                                                              gcgattttcaataatacgtgatgcagctcacacaaaacatgcaattacttaacataaatgTATAAGTCATACTTTTGTTGTGGGTGAATTTCAATCTGTTAAACAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGaa                                                            <  1:1030299‑M2/83‑1 (MQ=255)
                                                                               cgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAACCAGGaat                                                           <  1:472044‑M2/84‑1 (MQ=255)
                                                                                    ttcaataatgcgtgatgcatatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCg                                                      <  2:1065817‑M2/89‑1 (MQ=255)
                                                                                    ttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAggaataattg                                                      >  1:1090481‑M2/55‑141 (MQ=255)
                                                                                      caataatgcggtctgcagatcacacaaaactctcaattacttaacataaatgTATAAGTCATACTTTTGGTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGaa                                                    <  1:13435‑M2/91‑1 (MQ=255)
                                                                                       aataatgcgtgatgcagatcacacaaaacactccattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTAGCTACGCTAGCACGCAAAAATGAaacaagaataaacaaca                                                   >  1:808775‑M2/52‑137 (MQ=255)
                                                                                       aataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGACTAATCGaaa                                                   >  1:677339‑M2/52‑143 (MQ=255)
                                                                                       aataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGaaa                                                   >  2:948452‑M2/52‑143 (MQ=255)
                                                                                       aataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGaaa                                                   >  2:1105591‑M2/52‑143 (MQ=255)
                                                                                           ttgtgtgatctgcatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAGTggg                                               >  2:556330‑M2/48‑143 (MQ=255)
                                                                                             gcgtgatgcagatcacacaaaacactcaattacttaacataactgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGAt                                             >  1:784262‑M2/46‑143 (MQ=255)
                                                                                             gcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGAAAGCAAAAATGAAACAGGAATAATCGAAATGGGa                                              >  1:865398‑M2/46‑143 (MQ=255)
                                                                                                  aggtagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTgc                                        <  1:276137‑M2/103‑1 (MQ=255)
                                                                                                   tgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTgcg                                       <  2:856505‑M2/104‑1 (MQ=255)
                                                                                                        atcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAg                                  <  2:7203‑M2/109‑1 (MQ=255)
                                                                                                         tcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGt                                 >  2:684289‑M2/34‑143 (MQ=255)
                                                                                                           acacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGATTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCa                               >  1:254976‑M2/32‑143 (MQ=255)
                                                                                                            cacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCaa                              >  2:303236‑M2/31‑143 (MQ=255)
                                                                                                             acaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCTAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCaaa                             >  2:531900‑M2/30‑143 (MQ=255)
                                                                                                               aaaacactcaatgacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAAt                           <  2:200177‑M2/116‑1 (MQ=255)
                                                                                                                 aacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAACAAGTTTTTCGCTACGCTAGCAAGCAACAATGAAACAGGAATAATCGAAACGCCACGTTGCACACAGCCCAAATaa                         >  1:1145013‑M2/26‑143 (MQ=255)
                                                                                                                      tcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAGAGAGGATGTTGCGCACAGTCAAAATAACTCAc                    >  2:897618‑M2/21‑143 (MQ=255)
                                                                                                                      tcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATATGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTACGCACAGTCaaactaaattag                    >  1:394328‑M2/21‑138 (MQ=255)
                                                                                                                            acttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTaaa              <  2:275245‑M2/129‑1 (MQ=255)
                                                                                                                            acttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTaaa              <  2:875585‑M2/129‑1 (MQ=255)
                                                                                                                              ttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGGTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAaata            >  2:343958‑M2/13‑143 (MQ=255)
                                                                                                                              ttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATATGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCCCCGTAaata            >  2:1105246‑M2/13‑143 (MQ=255)
                                                                                                                                     agatgTATAAGTCATACTTTTGTGTTGGGTGTATTTCAATCTGTTAAAAATTCTTTCGCTACGCTAGCAAGCAAAAATAAAACATGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCt     <  1:230008‑M2/138‑1 (MQ=255)
                                                                                                                                        tgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCt  <  2:1054139‑M2/141‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                             
GGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCT  >  NC_000913/1979141‑1979419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.