| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3982817 = | 36 (0.710) | 4 (0.080) | 4/266 | 6.8 | 10.0% | intergenic (+7/‑140) | proM/aslB | tRNA‑Pro/putative AslA‑specific sulfatase‑maturating enzyme |
| ? | NC_000913 | 3982837 = | 38 (0.800) | intergenic (+27/‑120) | proM/aslB | tRNA‑Pro/putative AslA‑specific sulfatase‑maturating enzyme | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTGCAGCATGGTCGCTCCTTGCCTGAAGTCATCCTTCAATACGTTAAGGGCGAAATCATACCGTGGGGCAATGAGTTATTACGGGCGTTTATTGCGAAGGGAGGGTGACGAAATGCACAGAAAACAAAAAACCCCGCCGAAGCGGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3982965‑3982817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggggttTTTTGTTT‑TCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGATGACTTCAGGCAAGGAGCGACCATGCTGCAACAGGTTCCAA > NC_000913/3982837‑3982975 gcGCAGCATGGTCGCTCCTTGCCTGAAGTCATCCTTCAATACGTTAAGGGCGAAATCATACCGTGGGGCAATGAGTTATTACGGGCGTTTATTGCGAAGGGAGGGTGACGAAATGCACAGAAAACAAAAAACCCCGCCGAAGC > 1:631433/3‑143 GCAGGATGGTCGCAGCTTGCATGAAGTAATGCTTCAATACGTTAAGGGAGAAATCATACCGTAGGGCAATGAGTTATTACGGGCGTTTATTGCGAAGGGAGAGAGACGAAATGAACAGAAAACAAAAAACCCCGCCGAAGCGG < 1:619211/143‑1 CAGCCTGGTCGCTCCTTGCCTGAAGTCATCCTTCAATACGCTAAGGGCGAAATCATACCGCGGGCCAATGAGTTATCACGGGCGTTTATTGCGAAGGGAGGGTGACGAAATGCACAGAAAACAAAAAACCCCGCCGAAGCGGG < 2:226030/143‑1 CATGGTCGCTCCTTGCCTGAAGTCATCCTTCAATACGTTAAGGGCGAAATCATACCGTGGGGCAATGAGTTATTACGGGCGTTTATTGCGAAGGGAGGGTGACGAAATGCACAGAAAACAAAAAACCCCGCCGAAGCGGGGTT > 2:516733/1‑143 AACAAAAAACCCCGCCGAAGCGGGGTTTTTTGTTT‑TCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCC > 1:677612/1‑74 AACAAAAAACCCCGCCGAAGCGGGGTTTTTTGTTT‑TCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCC < 2:677612/74‑1 AAAAACCCCGCCGAAGCGGGGTTTTTTGTTT‑TCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGATGACTTCGGACAAGGGGCGGCC > 2:2030/1‑143 AAAACCCCGCCGAAGCGGGGTTTTTTGTTT‑TCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGATGACTTCAGGCAAGGAGCGACCA > 2:139418/1‑143 gctgcgtcggtgTTTGTGTTTGTCTGTGCATTTCGTCAGCCGCGCTTCGCAATAAACGCGCGTAATAAGTCATTGCTCCACGGTATGATTTCGACCTTAACGTATTGAAGGATGACTTCAGGCAAGGAGCGACCATGCTGCAA < 1:652157/131‑1 GGGTTGTTTGTTT‑TCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGATGACTTCAGGCAAGGAGCGATCATGCTGCAACAGGTTCCA < 2:113805/143‑1 GGTTTTTTGCTT‑CCTGTCCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCGTAACGTAGTGAAGGATGACTTCAGGCAAGGAGCGACCATGCTGCAACAGGTTCCAA < 2:379304/143‑1 TTGCAGCATGGTCGCTCCTTGCCTGAAGTCATCCTTCAATACGTTAAGGGCGAAATCATACCGTGGGGCAATGAGTTATTACGGGCGTTTATTGCGAAGGGAGGGTGACGAAATGCACAGAAAACAAAAAACCCCGCCGAAGCGGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3982965‑3982817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggggttTTTTGTTT‑TCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGATGACTTCAGGCAAGGAGCGACCATGCTGCAACAGGTTCCAA > NC_000913/3982837‑3982975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |