New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3982817 =	36 (0.710)	4 (0.080)	4/266	6.8	10.0%	intergenic (+7/‑140)	proM/aslB	tRNA‑Pro/putative AslA‑specific sulfatase‑maturating enzyme
	?	NC_000913	3982837 =	38 (0.800)					intergenic (+27/‑120)	proM/aslB	tRNA‑Pro/putative AslA‑specific sulfatase‑maturating enzyme
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGATGACTTCAGGCAAGGAGCGACCATGCTGCAACAGGTTCCAA  >  NC_000913/3982696‑3982975                                                                                                                                              |                                                                                                                                           tttAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGCATCCTCTCTCGCCGACCAGTTTTGCACCCCGCTACGCCGGGGtttt                                                                                                                                           >  1:60629/1‑143 (MQ=255)   tAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGCAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATCTTGAACCCCGCTACGGCGGGGtttttt                                                                                                                                         >  1:377571/1‑143 (MQ=255)        aaTTGAACTAGTAATTCAAAAAGCAGTATTGCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGtttt                                                                                                                                    <  1:880938/143‑1 (MQ=255)          ttGAACTAAAAATTCAAAAAGCAGTATTCCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCt                                                                                                                                  <  2:447899/143‑1 (MQ=255)           tGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCtg                                                                                                                                 >  2:665593/1‑143 (MQ=255)            gAACTAAAAATTCAAAAAGCATTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCATTTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCtgt                                                                                                                                <  2:530609/143‑1 (MQ=255)                      ttCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTc                                                                                                                      >  2:825936/1‑143 (MQ=255)                             ggCAGTGTTTCGGCGAGTAGCGGAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCAccctcc                                                                                                               <  1:445113/142‑1 (MQ=255)                                    tttCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCa                                                                                                        >  2:494043/1‑143 (MQ=255)                                    tttCGGCGAGGGGCGCAGCTTGGTAGCGCTACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCa                                                                                                        <  1:176804/143‑1 (MQ=255)                                          cGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATaaag                                                                                                  >  1:42129/1‑142 (MQ=255)                                            tgTAGCTCATCTTGTTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTCGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGc                                                                                                <  2:876775/142‑1 (MQ=255)                                                gcgcAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATACACGCCCGt                                                                                            >  2:631433/1‑143 (MQ=255)                                                 cgcAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGGTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGta                                                                                           >  2:277320/1‑143 (MQ=255)                                                      cTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTCTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAAc                                                                                      >  2:78324/1‑143 (MQ=255)                                                               gcAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGccc                                                                             <  1:400207/143‑1 (MQ=255)                                                               gcAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTGTTGTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAGTAGACGCCCGGAATCACTACTTGccc                                                                             >  2:518353/1‑143 (MQ=255)                                                                taaCTGGTTTGGGAACAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCAACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGcccc                                                                            <  1:306686/142‑1 (MQ=255)                                                                     ggTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGt                                                                       >  2:469677/1‑143 (MQ=255)                                                                      gtcccaaaCCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAAt                                                                                                      <  2:309358/104‑1 (MQ=255)                                                                      gtcccaaaCCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAAt                                                                                                      >  1:309358/8‑111 (MQ=255)                                                                       tttGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTGTGGGGGTCTGTGCATTTCATGATCCTCCTTTCTCCATAAACGCCCGTGGTAGCTCACTGCACAACGGTAt                                                                     >  1:58098/1‑143 (MQ=255)                                                                               cAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGc                                                             >  1:542352/1‑143 (MQ=255)                                                                                 gTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGccc                                                           <  1:814275/143‑1 (MQ=255)                                                                                   gggTCGGTGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCtt                                                         <  1:376284/143‑1 (MQ=255)                                                                                      tCGGTGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAAc                                                      <  1:75836/143‑1 (MQ=255)                                                                                           ggTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTAtt                                                 <  2:862218/143‑1 (MQ=255)                                                                                                gggtCCTCTCTCGCCGACCGATTGTGAACCCCGCTGCGGCGGGGTTTTGTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAgg                                            <  1:458390/140‑1 (MQ=255)                                                                                                 aaTCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGa                                           <  1:551129/143‑1 (MQ=255)                                                                                                  aTCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGAt                                          <  2:492112/143‑1 (MQ=255)                                                                                                              cGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGCCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCCTAACGTATCAAAGGAAGACATCAGGCac                              >  1:328140/1‑142 (MQ=255)                                                                                                                 ccAATTTTGCACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGATGACTTCAGGCAAGGa                           <  2:765711/143‑1 (MQ=255)                                                                                                                      tttGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGATGACTTCAGGCAAGGAGCGAc                      <  1:107720/143‑1 (MQ=255)                                                                                                                        aaaaccccgccgaagcggGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGATGACTTCAGGCAAGGAGCGACCa                    >  2:139418/15‑143 (MQ=255)                                                                                                                          aaCCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGATGACTTCAGGCAAGGAGCGACCAtg                  <  2:516733/143‑1 (MQ=255)                                                                                                                             cccGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTGATAACTCATTGGCCCGCGGTATGATTTCGCCCTTAGCGTATTGAAGGATGACTTCAGGCAAGGAGCGACCAggctg               >  2:226030/1‑143 (MQ=255)                                                                                                                              ccGCTTCGGCGGGGTTTTTTGTTTTCTGTTCATTTCGTCTCTCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCTACGGTATGATTTCTCCCTTAACGTATTGAAGCATTACTTCATGCAAGCTGCGACCAtcctgc              >  1:619211/1‑143 (MQ=255)                                                                                                                                gCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGATGACTTCAGGCAAGGAGCGACCAtgctgcgc            <  1:631433/143‑3 (MQ=255)                                                                                                                                 gcgcggcggGGTGTGTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGATGACTTCAGGCAAGGAGCGACCATGCTGCAAc           <  1:694300/140‑1 (MQ=255)                                                                                                                                         gggTTGTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGATGACTTCAGGCAAGGAGCGATCATGCTGCAACAGGTTCCa   <  2:113805/143‑1 (MQ=255)                                                                                                                                          ggTTTTTTGCTTCCTGTCCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCGTAACGTAGTGAAGGATGACTTCAGGCAAGGAGCGACCATGCTGCAACAGGTTCCaa  <  2:379304/143‑1 (MQ=255)                                                                                                                                              |                                                                                                                                           TTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAATCCTCTCTCGCCGACCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTGCATTTCGTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGATGACTTCAGGCAAGGAGCGACCATGCTGCAACAGGTTCCAA  >  NC_000913/3982696‑3982975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.