| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4001644 | 4001648 | 5 | 47 [0] | [0] 47 | corA | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 0 (0.000) | 46 (0.910) | 39/282 | 0.2 | 100% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 0 (0.000) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCC > NC_000913/4001501‑4001782 | cAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCat < 2:810753/143‑1 (MQ=255) gatGGATTGATCTTGTCGAATCGGAGGACGACGAGCGACTGCGCGTACAATTTGAGTTTGGCCAGAGCCTGGCAACCCGCCCGGAACGGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctc < 1:674111‑M1/142‑4 (MQ=255) attgattGATCTCGTCGAACGGGACGACGCGGAGCGACTGTGCGGACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc < 1:524534‑M1/140‑5 (MQ=255) aTGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc < 2:258844‑M1/143‑5 (MQ=255) aTGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc < 1:590992‑M1/143‑5 (MQ=255) tGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGACGCCGACGACGGCCTGCATctccttcttc > 2:738868‑M1/1‑133 (MQ=255) cTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGCCGCCGGCCTGCATctccttcttcttcg > 2:876553‑M1/1‑129 (MQ=255) ttGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCACCCCGCCCGGAACTGGAACCCATCGAAGCATCTGGACGTTTCTTTGAAGACGACGACGGCAAGCACctgcttcttcctcgt > 2:444150‑M1/1‑128 (MQ=255) gTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttg > 2:586303‑M1/1‑126 (MQ=255) gTCGAACCGCACGCCGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttg < 2:765966‑M1/143‑18 (MQ=255) cGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGTCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgc < 1:238931‑M1/143‑25 (MQ=255) cgacgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGCAGACATCGAAGCATCGGCACGTCCCTTTGAAGACGACGACGGCCTGCATctacttcttcttctccgccgaggcgggg > 1:478378‑M1/1‑115 (MQ=255) acgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGACAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgc > 2:569840‑M1/1‑113 (MQ=255) acgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGACAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgc < 1:569840‑M1/137‑25 (MQ=255) gacgaGCGACGGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatc < 2:348622‑M1/143‑33 (MQ=255) acgaGCGACTGCGCGTACAATCTGGACTTGGCCAGAGCCTGGCAACTCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatca < 1:212434‑M1/143‑34 (MQ=255) cTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggta < 1:311497‑M1/143‑42 (MQ=255) gcgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactc < 1:349574‑M1/143‑46 (MQ=255) aaTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTATGAAGACGACGACGGCCTGCATctcctgcttcttctttgaagatgcgcaagatcacgccggtaactccactgt > 1:753765‑M1/1‑92 (MQ=255) cggaaCTGGACGAGGGCCTGGCGACCCGCCCGGAACTGGAAGACATCGAAGCAGCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggc < 1:807437‑M1/141‑55 (MQ=255) tGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgccgaagatcacgccggtaactccactgtggca > 2:819508‑M1/1‑88 (MQ=255) tGAACTGGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggca < 1:505712‑M1/143‑56 (MQ=255) ttGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttac > 2:522847‑M1/1‑83 (MQ=255) agagCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGGAGACGACGACGGCCTGCATctccttcttcttctttgaagctgcggaagatcacgccggtaactccactgtggcatttcccatcgg > 2:44506‑M1/1‑77 (MQ=255) ccggcaACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg < 2:83286‑M1/141‑72 (MQ=255) cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg < 2:381215‑M1/143‑72 (MQ=255) ggCAACCCGCCGGGACCTGCAAGACATCGAAGCAGCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctttgaagatgcggaacatcacgccggtaactccactgtggcatttaccatccgtgatggtcgt < 2:848240‑M1/143‑74 (MQ=255) gCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgcgacggcc > 2:847053‑M1/1‑69 (MQ=255) ccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtcggttta > 2:359191‑M1/1‑60 (MQ=255) cgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGCAGACGACGCCGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtgccagttccaacccgtgctggtcgcaggtttac > 1:204422‑M1/1‑59 (MQ=255) gAACTGGAAGACATCGGAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactc < 2:508025‑M1/143‑87 (MQ=255) aaCTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactct > 2:294693‑M1/1‑56 (MQ=255) cTGGAAAACATCGAAGCATCAGCACGCTGCTTGGAAGACGACGACGGCCTGCAGctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgc < 2:63939‑M1/143‑90 (MQ=255) tGGAAGACATCCAAGCATCGGCACGCTTCTTTGAAGACGACGACGGCCTGCATctcctgcttcttctttgaagatgcggaagatcacgccggtaactccactgcggcatttaccatccgtgatggtcgtctgtttactctgcg < 2:271794‑M1/143‑91 (MQ=255) ggAAGACATCGAAGCGTCGGCACGTTTCTGTGAAGACGACGACGGCCTGCATctcctgcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt < 2:356857‑M1/143‑92 (MQ=255) aGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatgggcgtctgtttactctgtgtggg > 1:494843‑M1/1‑49 (MQ=255) cATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccaccgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgt < 2:826578‑M1/143‑98 (MQ=255) tttCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcgcgcttttggg > 2:135803‑M1/1‑28 (MQ=255) tCTTTGAAGCCGACGGCGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct < 2:433190‑M1/143‑118 (MQ=255) tCTGTGAAGACGACGACGGCCTGCATctccttctccttctttgaagatgcggaagatcacgccggtaactcctctgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct < 2:190590‑M1/143‑118 (MQ=255) aGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaacatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgt > 2:848618‑M1/1‑19 (MQ=255) gacgacgacGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgta > 2:424303‑M1/1‑18 (MQ=255) acggcgacgGCCTGCATcgccttcgacggctcggaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat < 2:65570‑M1/143‑127 (MQ=255) gggcggcagctccgtcttcttcttggaagatgcggacgatcatgccggtaactctacggtggcattaaccagccgtgatggtcgtctgttgactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgccc < 1:770012‑M1/138‑135 (MQ=255) gCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccg > 2:822132‑M1/1‑8 (MQ=255) gCATctccttcttgttctttgaagatgcggaagatttcgccgttaattccactgtggcatttaccatccgtgttggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagc < 1:418510‑M1/143‑140 (MQ=255) gCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgacctgcccgcttttcttctgtatcgtctgcgtgccctcagc > 1:105098‑M1/1‑4 (MQ=255) | CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCC > NC_000913/4001501‑4001782 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |