| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4001644 | 4001648 | 5 | 47 [0] | [0] 47 | corA | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 0 (0.000) | 46 (0.910) | 39/282 | 0.2 | 100% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 0 (0.000) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGT > NC_000913/4001509‑4001791 | gatggattgatcttgtcgaatcggaggacgacgagcgactgcgcgtacaatttgagtttggccagagcctggcaacccgcccggaacgggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatctc < 1:674111‑M2/3‑1 (MQ=255) attgattgatctcgtcgaacgggacgacgcggagcgactgtgcggacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc < 1:524534‑M2/4‑1 (MQ=255) atggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc < 2:258844‑M2/4‑1 (MQ=255) atggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc < 1:590992‑M2/4‑1 (MQ=255) tgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgacgccgacgacggcctgcatCTCcttcttc > 2:738868‑M2/134‑143 (MQ=255) cttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgccgccggcctgcatCTccttcttcttcg > 2:876553‑M2/130‑142 (MQ=255) ttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaccccgcccggaactggaacccatcgaagcatctggacgtttctttgaagacgacgacggcaagcacCtgcttcttcctcgt > 2:444150‑M2/129‑141 (MQ=255) gtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTg > 2:586303‑M2/127‑143 (MQ=255) gtcgaaccgcacgccgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTg < 2:765966‑M2/17‑1 (MQ=255) cggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgtccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc < 1:238931‑M2/24‑1 (MQ=255) cgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggcagacatcgaagcatcggcacgtccctttgaagacgacgacggcctgcatctacttcttcttctccgccgaggcgggg > 1:478378‑M2/116‑129 (MQ=255) acgacgagcgactgcgcgtacaatctgaacttggccagagcctgacaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc > 2:569840‑M2/114‑137 (MQ=255) acgacgagcgactgcgcgtacaatctgaacttggccagagcctgacaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc < 1:569840‑M2/24‑1 (MQ=255) gacgagcgacggcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATc < 2:348622‑M2/32‑1 (MQ=255) acgagcgactgcgcgtacaatctggacttggccagagcctggcaactcgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCa < 1:212434‑M2/33‑1 (MQ=255) ctgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTa < 1:311497‑M2/41‑1 (MQ=255) gcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTc < 1:349574‑M2/45‑1 (MQ=255) aatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctatgaagacgacgacggcctgcatCTCCTGCTTCTTCTTTGAAGATGCGCAAGATCACGCCGGTAACTCCACtgt > 1:753765‑M2/93‑143 (MQ=255) cggaactggacgagggcctggcgacccgcccggaactggaagacatcgaagcagcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGc < 1:807437‑M2/54‑1 (MQ=255) tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCCGAAGATCACGCCGGTAACTCCACTGTGGCa > 2:819508‑M2/89‑143 (MQ=255) tgaactgggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCa < 1:505712‑M2/55‑1 (MQ=255) ttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTAc > 2:522847‑M2/84‑143 (MQ=255) agagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttggagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGCTGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTCCCatcgg > 2:44506‑M2/78‑141 (MQ=255) ctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATg < 2:381215‑M2/71‑1 (MQ=255) ccggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATg < 2:83286‑M2/71‑1 (MQ=255) ggcaacccgccgggacctgcaagacatcgaagcagcggcacgtttctttgaagacgacgacggcctgcatCTC‑‑‑CTTCTTCTTTGAAGATGCGGAACATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtcgt < 2:848240‑M2/73‑1 (MQ=255) gcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGCGacggcc > 2:847053‑M2/70‑141 (MQ=255) ccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCGGTTTa > 2:359191‑M2/61‑143 (MQ=255) cggaactggaagacatcgaagcatcggcacgtttctttgcagacgacgccggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGCCAGTTCCAACCCGTGCTGGTCGCAGGTTTAc > 1:204422‑M2/60‑143 (MQ=255) gaactggaagacatcggagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTActc < 2:508025‑M2/86‑1 (MQ=255) aactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTActct > 2:294693‑M2/57‑143 (MQ=255) ctggaaaacatcgaagcatcagcacgctgcttggaagacgacgacggcctgcagCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgc < 2:63939‑M2/89‑1 (MQ=255) tggaagacatccaagcatcggcacgcttctttgaagacgacgacggcctgcatCTCCTGCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGCGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcg < 2:271794‑M2/90‑1 (MQ=255) ggaagacatcgaagcgtcggcacgtttctgtgaagacgacgacggcctgcatCTCCTGCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgt < 2:356857‑M2/91‑1 (MQ=255) agacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGGCGTCTGTTTACtctgtgtggg > 1:494843‑M2/50‑141 (MQ=255) catcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACCGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgt < 2:826578‑M2/97‑1 (MQ=255) tttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCGcgcttttggg > 2:135803‑M2/29‑140 (MQ=255) tctttgaagccgacggcggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt < 2:433190‑M2/117‑1 (MQ=255) tctgtgaagacgacgacggcctgcatCTCCTTCTCCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCTCTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt < 2:190590‑M2/117‑1 (MQ=255) agacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAACATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGt > 2:848618‑M2/20‑143 (MQ=255) gacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTa > 2:424303‑M2/19‑143 (MQ=255) acggcgacggcctgcatCGCCTTCGACGGCTCGGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAt < 2:65570‑M2/126‑1 (MQ=255) gggcggcagCTCCGTCTTCTTCTTGGAAGATGCGGACGATCATGCCGGTAACTCTACGGTGGCATTAACCAGCCGTGATGGTCGTCTGTTGACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGccc < 1:770012‑M2/134‑1 (MQ=255) gcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCg > 2:822132‑M2/9‑143 (MQ=255) gcatCTCCTTCTTGTTCTTTGAAGATGCGGAAGATTTCGCCGTTAATTCCACTGTGGCATTTACCATCCGTGTTGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGc < 1:418510‑M2/139‑1 (MQ=255) gcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGACCTGCCCGCTTTTCTTCTGTATCGTCTgcgtgccctcagc > 1:105098‑M2/5‑138 (MQ=255) cTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGt > 2:128272/1‑143 (MQ=255) | ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGT > NC_000913/4001509‑4001791 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |