New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40499062 (0.030)71 (1.210) 55/284 0.0 97.3% noncoding (9/109 nt) spf Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent
?NC_000913 = 4499512 NA (NA)intergenic (+11/+82) insD1/yjgX IS2 transposase TnpB/pseudogene fragment

GCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4049767‑4049906
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGT  <  NC_000913/4499512‑4499371
                                                                                                                                                                                                                                                                                           
GCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGG                                                                                                                                             >  1:121998/1‑143
GCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGG                                                                                                                                             >  1:668966/1‑143
GCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGG                                                                                                                                             <  1:418840/143‑1
  ttgTTTTCCGAAGTAAGTAATATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGAAACAACTGAAAAAAAAGTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGAT                                                                                                                                           <  1:316843/140‑1
  CTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTTTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAACAGTAAAGTTAGTCGCGTCGGGTACTGGAT                                                                                                                                           >  1:329150/1‑143
   TTTTTTCGTAAGTAAGCACCGTAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGAat                                                                                                                                          >  1:529413/1‑141
    TTTTTCGCAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTT                                                                                                                                         <  2:377489/143‑1
      TTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGC                                                                                                                                       <  2:850602/143‑1
      TTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGC                                                                                                                                       <  1:894711/143‑1
        cCGTAAGTAAGCTACCTAAGGTGTCGCGTTTTGTGATGCCTATTACAAATTCTTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCC                                                                                                                                     <  1:552272/142‑1
        TCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCC                                                                                                                                     <  2:217620/143‑1
          GTAAGTAAGCAACATAAGCTGTCACGGTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGGACTGAACACACAAGCGGCAAGTTTGTCGCGGTGGGTTTTGGATTTGCCCCT                                                                                                                                   >  2:351702/1‑143
                AAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTAATGGATTTGCCCCTATATTT                                                                                                                             >  2:984539/1‑143
                 AGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTAACCAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTAGCGCCTATACTTC                                                                                                                            >  1:878032/1‑143
                  GCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCC                                                                                                                           >  2:916909/1‑143
                  GCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCC                                                                                                                           <  1:252312/143‑1
                   CAAGATAAGCTGTCACGGTTTGTGATGGCTATTAGAAATTCATATGCAACAAATGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCA                                                                                                                          <  1:478647/143‑1
                   CAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCA                                                                                                                          <  2:268841/143‑1
                   CAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCA                                                                                                                          <  2:100082/143‑1
                      CATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAAATTACAAAAAGTGCTTTCGGAACTGAACAAAACAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCCATAGTTCCAGg                                                                                                                        >  1:489088/1‑142
                      CATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGAATTGCCCCTATATTCCCAGAC                                                                                                                       >  1:489034/1‑143
                              GTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTA                                                                                                               <  2:880700/143‑1
                               TCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCCGACATCTGTTAc                                                                                                              >  1:35906/1‑142
                                 ACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCA                                                                                                            >  2:301667/1‑143
                                   GTTTTGTGATGGCTAATAGAAATTCCTAAGCAAGAACTTAAAAAAAAGTACAATAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACT                                                                                                          <  1:209399/143‑1
                                      ttcTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAA                                                                                                       <  2:360209/140‑1
                                        tgtATGGCTATTAGAAATTCATAGGAAACAGTTGGGCACAACTTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACC                                                                                                     <  1:714422/140‑1
                                        GTGATGGCTAGTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACC                                                                                                     <  2:250358/143‑1
                                           ATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGGACGAAAAATAGTAAAGTTAGTCGCTTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCAT                                                                                                  <  2:469876/143‑1
                                            TGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGCACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAGCCCATT                                                                                                 >  1:557569/1‑143
                                             GGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTA                                                                                                <  2:388923/143‑1
                                              GCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAATAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCACCTATATTTCCAGACATCTGTTATCACTTAACCAATTAC                                                                                               >  1:493004/1‑143
                                                  TTAGAAATTGCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTGCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGC                                                                                           <  1:269810/143‑1
                                                   TAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTCGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCCTTACAAGCC                                                                                          >  1:165342/1‑143
                                                   TAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCC                                                                                          >  1:479754/1‑143
                                                     GAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTCCAAGCCCG                                                                                        >  2:398058/1‑143
                                                        ATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTATTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTG                                                                                     <  2:547343/143‑1
                                                             TATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAGGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAACCCCGCTGCCGCg                                                                                >  2:329844/1‑142
                                                              gaGCAACAACTGAAAAAAAATTACAACAAGGGCTTGCTGAACTGAACAAAACAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAG                                                                               <  1:207161/141‑1
                                                                    CAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTCACGTACAGCTCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTC                                                                         <  2:231052/143‑1
                                                                    CAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTC                                                                         <  2:755446/143‑1
                                                                     AACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGCGTAAAGTTAGGGGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCC                                                                        >  2:279754/1‑143
                                                                        TGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGT                                                                     <  1:317025/143‑1
                                                                         GAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTG                                                                    <  1:139773/143‑1
                                                                         GAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGAGGATACTCCCGTG                                                                    >  1:749777/1‑143
                                                                           AAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGG                                                                   >  1:393023/1‑143
                                                                              AAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCGATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGA                                                                <  1:510536/143‑1
                                                                                AAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCCCCGATATTCCCGTGGCGAGC                                                              >  2:378328/1‑143
                                                                                       AAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACC                                                       >  2:906501/1‑143
                                                                                       AAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACC                                                       >  1:570621/1‑143
                                                                                          AAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGGCATCTGTTATCACTTAACCAATTATTAGCGTTCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAG                                                    >  2:85005/1‑143
                                                                                                TTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCCGCGacct                                              >  2:473085/1‑139
                                                                                                 TTCTGAGCTGAACATAAAAGAGTAAAGTTAGTCGCCTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTA                                             <  1:591059/143‑1
                                                                                                    tgagcgGAACAAAAAAGAGTAAAGTGAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGC                                          <  2:459522/137‑1
                                                                                                    TGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGC                                          <  2:668966/143‑1
                                                                                                        CTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGAT                                      <  2:121998/143‑1
                                                                                                        CTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCAATTACAAGCCCGCTGCCGCAGATCTTCCCGTGGCGAGCGATAACCCCACGCACTATGCGGAc                                      >  1:260518/1‑142
                                                                                                           AACAAAAAAGAGTAAAGTTAGTCGCGTGGGGTACTGGATTTGCCCCTATATTCCCAGACATCTGTTATCACTCAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCC                                   <  1:688983/143‑1
                                                                                                           AACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCAAGCGATAACCCAGCGCACTATGCGGATGCC                                   >  2:646589/1‑143
                                                                                                                AAAAGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGCTATTCCCGTGGCGAGCGATAACCCCGCGCACTACGCGGACGCCCTTCG                              >  1:77686/1‑143
                                                                                                                   AGAGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTA                           <  2:749777/143‑1
                                                                                                                     AGTAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTGTGCGGATGCCACTCGTTATA                         >  2:784925/1‑143
                                                                                                                       TAAAGTTAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATACCCCAGCGCACCACGCGGCTGCCCTTCGCTACAAT                       >  1:659882/1‑143
                                                                                                                        aacgtgAGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAGCCCATTACCAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATG                      <  1:764142/137‑1
                                                                                                                              AGTCGCGTAGGGTACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAA                <  2:886889/143‑1
                                                                                                                                          TACTGGATTTGCCCCTCTCCTCCCACACATCTGTTATCACTTAACCCAGTACGAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAG    <  1:402937/143‑1
                                                                                                                                          TACTCGATTTGCCCCTATATGTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAG    <  2:49006/143‑1
                                                                                                                                           ACTGTATTTCCCCCTAGCTTTCCAGACATCTGATATCACGTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGG   <  1:752724/143‑1
                                                                                                                                           ACTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATAATCACGTGGTGAGCGGTAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGG   >  2:791745/1‑143
                                                                                                                                            CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGT  >  2:414893/1‑143
                                                                                                                                            CTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCAGCGGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGAGCCCATTCGTTAGAAAGCTCGAACGCCCCTGCACGGT  >  1:236316/1‑143
                                                                                                                                                                                                                                                                                           
GCCTTTTTTCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4049767‑4049906
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGT  <  NC_000913/4499512‑4499371

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.