New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3987307	55 (0.940)	4 (0.070)	4/274	8.3	6.8%	coding (575/1197 nt)	hemY	putative protoheme IX synthesis protein
	?	NC_000913	= 3987324	57 (1.010)					coding (558/1197 nt)	hemY	putative protoheme IX synthesis protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCCATCAGGCCAATCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTCGTTGCCGGCCAGCTC  >  NC_000913/3987171‑3987446                                                                                                                                         |                                                                                                                                            aTCCATCAGGCCAATCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCCGCCGTa                                                                                                                                       >  1:921750/1‑143 (MQ=255)  tCCATCAGGCCAATCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTaa                                                                                                                                      <  2:81145/143‑1 (MQ=255)          gCCAATCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCCGACGTACTACTTCCg                                                                                                                              >  1:972017/1‑143 (MQ=255)          gCCAATCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCg                                                                                                                              >  2:35941/1‑143 (MQ=255)               tCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATAGCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGAtgg                                                                                                                         >  2:531520/1‑143 (MQ=255)                   tGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGAtggcgtg                                                                                                                     <  2:707619/143‑1 (MQ=255)                   tGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGAtggcgtg                                                                                                                     <  1:830482/143‑1 (MQ=255)                    gCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGAtggcgtgg                                                                                                                    >  1:563000/1‑143 (MQ=255)                       tgttgtTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGGTAGTATCCAGCAGCGAACTCCATCCACCTGTGCGGCTCTACGCCTGTTCCGCCCGACGTAACACTCCCGGCtggcctggcgc                                                                                                                 >  1:420888/1‑142 (MQ=255)                               cAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATCCTTCCGGATGGCGTGGCGTAACTTCca                                                                                                         >  2:220301/1‑143 (MQ=255)                               cAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCca                                                                                                         >  2:924499/1‑143 (MQ=255)                               cAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCca                                                                                                         >  2:489549/1‑143 (MQ=255)                               cAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCca                                                                                                         >  2:342917/1‑143 (MQ=255)                                  cATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCCTGCACCTGTGCGGAGATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTATCTTcgcgca                                                                                                      >  1:827176/1‑138 (MQ=255)                                  cATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCCGTGCGGCTATACGCCTGTTCCGCCAGCCGTAATACTCCCGGCGGGCGCGGCGTAACTGCcagca                                                                                                      >  1:758812/1‑143 (MQ=255)                                    ttGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATGCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCagcagc                                                                                                    <  1:749018/143‑1 (MQ=255)                                     tGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGACGTGGCGTAACTTCAAGCATCt                                                                                                   >  2:833110/1‑143 (MQ=255)                                        aCGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCCGACGTAATACTTCCGAATGGCGTGGCGTAACTTCCAGCAGCTTAt                                                                                                >  2:622118/1‑143 (MQ=255)                                          gATGTTATTCATCACCAACATGGGCTTGCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGGGGGCGTGGCGGGACGTCCagcagccgagcg                                                                                              >  1:946464/1‑137 (MQ=255)                                            tGTTCTTCGTCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACATGTGCGGCTATTCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCAc                                                                                            <  1:765065/143‑1 (MQ=255)                                                 ttcATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGCCGTAATACTTCCGGATGGCGTGGCCTAACTTCCAGCAGCTTCGCCAcccgcc                                                                                       >  2:999176/1‑138 (MQ=255)                                                  tcatcaCCACCATGGGCTTTCGCCCTTGACGCGATAATATCCTGCTGCGGACGCCATGCACCTGTGCGGATATACGCCTCTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTg                                                                                      <  1:602900/143‑1 (MQ=255)                                                      caCCAACGTCAGCTTTCGCCATTGCTGGGATAATATCCAGCAGCGAGCTCCATGCGCCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGt                                                                                  <  1:1017650/143‑1 (MQ=255)                                                       aCCAACGTGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGCTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTg                                                                                 <  1:253430/143‑1 (MQ=255)                                                       aCCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGTTGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTg                                                                                 >  2:444284/1‑143 (MQ=255)                                                        ccAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCCTGCACCTGTGCGGATATACACCTGTTCCGCCAGACGTAAGACTCCCGGATGCCGGAGCGTAACTCCCAACAGCTTATCCaaccccaggcgggc                                                                                >  1:17629/1‑130 (MQ=255)                                                                   tttCGCCATTGATGGGATAATATCCAGCAGCGAACACCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGAGTAACTTCCAGCAGACTATCCACGCCGTCGCGTGCCGCATggaatt                                                                     >  1:94342/1‑139 (MQ=255)                                                                     tCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCAACTCCGTGGCGTGCAGCATGGTTTTCa                                                                   <  1:125030/143‑1 (MQ=255)                                                                     tCGCCATTGAGGGGATAATTGCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCa                                                                   <  1:242803/143‑1 (MQ=255)                                                                        ccATTGATGGGATAATATCCAGCAGCGACATCCACACACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCCGATGGCGGGGCGTAACGCCCACCCGCTTATCCACCGCGTCGCGGGCCGCCTggcgtccccta                                                                >  1:559166/1‑134 (MQ=255)                                                                        ccATTGATGGGATAATATCCACCGGTGAGGCAGAGACACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGGGGCGTAACTTCCAGCAGCTTATCCACGCCGGGGCGAGCAGCACGGTTTTCATTa                                                                >  1:995368/1‑143 (MQ=255)                                                                                  gATAATATCTAGCATCGAACTCCATGCACCTGTGCGGGTATACGCCGGTTCCGCCAGACGTGATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGtt                                                      <  1:77461/143‑1 (MQ=255)                                                                                   ataataTCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTg                                                     <  2:157633/143‑1 (MQ=255)                                                                                    taataTCCAGCAGCGAACTCCATGCACCCGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGc                                                    <  1:761645/143‑1 (MQ=255)                                                                                      agagacagcagCGAACTCCATGCACCTGTGCGGATATACGCCTGTCCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAg                                                  <  2:492362/138‑1 (MQ=255)                                                                                           cagcagCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGGCAGCCGTAATACGCCCGGCTGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCCTGGTGTTCATTACGGGCCAGTGGCGGGCGtg                                             >  2:309251/1‑142 (MQ=255)                                                                                            agcagcGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTGTTCATTACGGGCCAGTTGCCGACGTAc                                            >  1:398350/1‑143 (MQ=255)                                                                                                gcGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACCTCCAGCAGCTTATCCACGCCGTGGCGTGCCGCATGGATTTCATTAAGGGCCAGTTGCAGACGTACGCgg                                        >  1:202409/1‑143 (MQ=255)                                                                                                gcGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGAAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTACAAACGTACGCgg                                        >  2:885975/1‑143 (MQ=255)                                                                                                 cGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTAATCggg                                       >  2:742526/1‑143 (MQ=255)                                                                                                       ccATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGAttt                                 <  1:171361/143‑1 (MQ=255)                                                                                                           gCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTAc                             <  2:995368/143‑1 (MQ=255)                                                                                                             aCCGGTGCGGATATACGCCTGTTCCGCCAGACGTCGTGCGTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCg                           <  1:444284/143‑1 (MQ=255)                                                                                                                  tgCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATg                      <  2:563000/143‑1 (MQ=255)                                                                                                                  tgCGGATATACGCCTGTTCCGCCAGACGTAATACTGCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATg                      <  2:257188/143‑1 (MQ=255)                                                                                                                  tgCGGATATACGCCTGGTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACCTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATg                      <  2:908279/143‑1 (MQ=255)                                                                                                                   gCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTCCCCGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCCTTACGGCCCCGTTGCAGGCCGACGCGGCAGGTGTCTACCGGCATgg                     >  1:587869/1‑143 (MQ=255)                                                                                                                    cGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGAGGGGGAGTTCTACCGGAGTGgt                    >  2:224725/1‑143 (MQ=255)                                                                                                                       ctataCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTc                 <  2:914549/142‑1 (MQ=255)                                                                                                                       atatACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTc                 <  1:489549/143‑1 (MQ=255)                                                                                                                        tataCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTCg                <  2:645815/143‑1 (MQ=255)                                                                                                                         ataCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGCTGCAGACGTACGCGGGTGAGTTCTACCGAACTGGTGTCGt               >  1:211518/1‑143 (MQ=255)                                                                                                                           aCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACACGGGTGATTTCTGACGGAATGGTGTCGTTg             >  1:848783/1‑143 (MQ=255)                                                                                                                            cGCCTGTTCCGCCAGATGCAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTCGTTGc            <  1:479811/143‑1 (MQ=255)                                                                                                                                      gCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGCTTTCTACCGGAATGGTGTCGTTGCCGGCCAGCTc  >  1:250817/1‑143 (MQ=255)                                                                                                                                         |                                                                                                                                            ATCCATCAGGCCAATCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTCGTTGCCGGCCAGCTC  >  NC_000913/3987171‑3987446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.