New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3987307	55 (0.940)	4 (0.070)	4/274	8.3	6.8%	coding (575/1197 nt)	hemY	putative protoheme IX synthesis protein
	?	NC_000913	= 3987324	57 (1.010)					coding (558/1197 nt)	hemY	putative protoheme IX synthesis protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTCGTTGCCGGCCAGCTCCGCTGCGCGTTCCAGATGT  >  NC_000913/3987185‑3987465                                                                                                                                            |                                                                                                                                              tCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATAGCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGAtgg                                                                                                                                            >  2:531520/1‑143 (MQ=255)     tGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGAtggcgtg                                                                                                                                        <  2:707619/143‑1 (MQ=255)     tGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGAtggcgtg                                                                                                                                        <  1:830482/143‑1 (MQ=255)      gCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGAtggcgtgg                                                                                                                                       >  1:563000/1‑143 (MQ=255)         tgttgtTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGGTAGTATCCAGCAGCGAACTCCATCCACCTGTGCGGCTCTACGCCTGTTCCGCCCGACGTAACACTCCCGGCtggcctggcgc                                                                                                                                    >  1:420888/1‑142 (MQ=255)                 cAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATCCTTCCGGATGGCGTGGCGTAACTTCca                                                                                                                            >  2:220301/1‑143 (MQ=255)                 cAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCca                                                                                                                            >  2:924499/1‑143 (MQ=255)                 cAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCca                                                                                                                            >  2:489549/1‑143 (MQ=255)                 cAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCca                                                                                                                            >  2:342917/1‑143 (MQ=255)                    cATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCCTGCACCTGTGCGGAGATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTATCTTcgcgca                                                                                                                         >  1:827176/1‑138 (MQ=255)                    cATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCCGTGCGGCTATACGCCTGTTCCGCCAGCCGTAATACTCCCGGCGGGCGCGGCGTAACTGCcagca                                                                                                                         >  1:758812/1‑143 (MQ=255)                      ttGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATGCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCagcagc                                                                                                                       <  1:749018/143‑1 (MQ=255)                       tGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGACGTGGCGTAACTTCAAGCATCt                                                                                                                      >  2:833110/1‑143 (MQ=255)                          aCGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCCGACGTAATACTTCCGAATGGCGTGGCGTAACTTCCAGCAGCTTAt                                                                                                                   >  2:622118/1‑143 (MQ=255)                            gATGTTATTCATCACCAACATGGGCTTGCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGGGGGCGTGGCGGGACGTCCagcagccgagcg                                                                                                                 >  1:946464/1‑137 (MQ=255)                              tGTTCTTCGTCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACATGTGCGGCTATTCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCAc                                                                                                               <  1:765065/143‑1 (MQ=255)                                   ttcATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGCCGTAATACTTCCGGATGGCGTGGCCTAACTTCCAGCAGCTTCGCCAcccgcc                                                                                                          >  2:999176/1‑138 (MQ=255)                                    tcatcaCCACCATGGGCTTTCGCCCTTGACGCGATAATATCCTGCTGCGGACGCCATGCACCTGTGCGGATATACGCCTCTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTg                                                                                                         <  1:602900/143‑1 (MQ=255)                                        caCCAACGTCAGCTTTCGCCATTGCTGGGATAATATCCAGCAGCGAGCTCCATGCGCCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGt                                                                                                     <  1:1017650/143‑1 (MQ=255)                                         aCCAACGTGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGCTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTg                                                                                                    <  1:253430/143‑1 (MQ=255)                                         aCCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGTTGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTg                                                                                                    >  2:444284/1‑143 (MQ=255)                                          ccAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCCTGCACCTGTGCGGATATACACCTGTTCCGCCAGACGTAAGACTCCCGGATGCCGGAGCGTAACTCCCAACAGCTTATCCaaccccaggcgggc                                                                                                   >  1:17629/1‑130 (MQ=255)                                                     tttCGCCATTGATGGGATAATATCCAGCAGCGAACACCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGAGTAACTTCCAGCAGACTATCCACGCCGTCGCGTGCCGCATggaatt                                                                                        >  1:94342/1‑139 (MQ=255)                                                       tCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCAACTCCGTGGCGTGCAGCATGGTTTTCa                                                                                      <  1:125030/143‑1 (MQ=255)                                                       tCGCCATTGAGGGGATAATTGCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCa                                                                                      <  1:242803/143‑1 (MQ=255)                                                          ccATTGATGGGATAATATCCAGCAGCGACATCCACACACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCCGATGGCGGGGCGTAACGCCCACCCGCTTATCCACCGCGTCGCGGGCCGCCTggcgtccccta                                                                                   >  1:559166/1‑134 (MQ=255)                                                          ccATTGATGGGATAATATCCACCGGTGAGGCAGAGACACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGGGGCGTAACTTCCAGCAGCTTATCCACGCCGGGGCGAGCAGCACGGTTTTCATTa                                                                                   >  1:995368/1‑143 (MQ=255)                                                                    gATAATATCTAGCATCGAACTCCATGCACCTGTGCGGGTATACGCCGGTTCCGCCAGACGTGATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGtt                                                                         <  1:77461/143‑1 (MQ=255)                                                                     ataataTCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTg                                                                        <  2:157633/143‑1 (MQ=255)                                                                      taataTCCAGCAGCGAACTCCATGCACCCGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGc                                                                       <  1:761645/143‑1 (MQ=255)                                                                        agagacagcagCGAACTCCATGCACCTGTGCGGATATACGCCTGTCCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAg                                                                     <  2:492362/138‑1 (MQ=255)                                                                             cagcagCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGGCAGCCGTAATACGCCCGGCTGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCCTGGTGTTCATTACGGGCCAGTGGCGGGCGtg                                                                >  2:309251/1‑142 (MQ=255)                                                                              agcagcGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTGTTCATTACGGGCCAGTTGCCGACGTAc                                                               >  1:398350/1‑143 (MQ=255)                                                                                  gcGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACCTCCAGCAGCTTATCCACGCCGTGGCGTGCCGCATGGATTTCATTAAGGGCCAGTTGCAGACGTACGCgg                                                           >  1:202409/1‑143 (MQ=255)                                                                                  gcGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGAAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTACAAACGTACGCgg                                                           >  2:885975/1‑143 (MQ=255)                                                                                   cGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTAATCggg                                                          >  2:742526/1‑143 (MQ=255)                                                                                         ccATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGAttt                                                    <  1:171361/143‑1 (MQ=255)                                                                                             gCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTAc                                                <  2:995368/143‑1 (MQ=255)                                                                                               aCCGGTGCGGATATACGCCTGTTCCGCCAGACGTCGTGCGTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCg                                              <  1:444284/143‑1 (MQ=255)                                                                                                    tgCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATg                                         <  2:563000/143‑1 (MQ=255)                                                                                                    tgCGGATATACGCCTGTTCCGCCAGACGTAATACTGCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATg                                         <  2:257188/143‑1 (MQ=255)                                                                                                    tgCGGATATACGCCTGGTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACCTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATg                                         <  2:908279/143‑1 (MQ=255)                                                                                                     gCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTCCCCGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCCTTACGGCCCCGTTGCAGGCCGACGCGGCAGGTGTCTACCGGCATgg                                        >  1:587869/1‑143 (MQ=255)                                                                                                      cGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGAGGGGGAGTTCTACCGGAGTGgt                                       >  2:224725/1‑143 (MQ=255)                                                                                                         ctataCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTc                                    <  2:914549/142‑1 (MQ=255)                                                                                                         atatACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTc                                    <  1:489549/143‑1 (MQ=255)                                                                                                          tataCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTCg                                   <  2:645815/143‑1 (MQ=255)                                                                                                           ataCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGCTGCAGACGTACGCGGGTGAGTTCTACCGAACTGGTGTCGt                                  >  1:211518/1‑143 (MQ=255)                                                                                                             aCGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACACGGGTGATTTCTGACGGAATGGTGTCGTTg                                >  1:848783/1‑143 (MQ=255)                                                                                                              cGCCTGTTCCGCCAGATGCAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTCGTTGc                               <  1:479811/143‑1 (MQ=255)                                                                                                                        gCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGCTTTCTACCGGAATGGTGTCGTTGCCGGCCAGCTc                     >  1:250817/1‑143 (MQ=255)                                                                                                                            gACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTCGTTGCCGGCCAGCTCCGCt                 <  2:921750/143‑1 (MQ=255)                                                                                                                                tAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCATCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTCGTTGCCGGCCAGCTCCGCTgcgc             <  2:514966/143‑1 (MQ=255)                                                                                                                                  aTACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATCACGGGCCAGTTGCAGAAGTACGCGGGTGATTTCTACCGGAATGGTGTCGTTGCCGGCCAGCTCAGCTCCGCGt           >  1:764014/1‑143 (MQ=255)                                                                                                                                    aCTTCCGGATGGCGTGGCATAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTCCGGGCCAGTTGCAGCCGTCCGAGGGTCATTTCTACCGGAATGATGCCCTCCCCGGCCCGCTCCGCCGCCCGtcc         >  1:163307/1‑141 (MQ=255)                                                                                                                                          ggATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGCTTTCTACCGGCCTGCTGTCGTTGCCGCCCAGCTCCGCTGCGCGTTCAAGATg   >  2:140686/1‑143 (MQ=255)                                                                                                                                          ggATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTCGTTGCCGGCCAGCTTCGCTTCTCGtctcaaatg   >  2:1000340/1‑135 (MQ=255)                                                                                                                                           gATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCAGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAAGGGTGTCGTTGCCGGCCAGCTCGGCTGCGCGTTCAAGATga  >  1:170580/1‑142 (MQ=255)                                                                                                                                            |                                                                                                                                              TCCATGCCTGTTGTTCCAGCATTGCACGATGTTCTTCATCACCAACATGGGCTTTCGCCATTGATGGGATAATATCCAGCAGCGAACTCCATGCACCTGTGCGGATATACGCCTGTTCCGCCAGACGTAATACTTCCGGATGGCGTGGCGTAACTTCCAGCAGCTTATCCACGCCGTGGCGTGCAGCATGGTTTTCATTACGGGCCAGTTGCAGACGTACGCGGGTGATTTCTACCGGAATGGTGTCGTTGCCGGCCAGCTCCGCTGCGCGTTCCAGATGT  >  NC_000913/3987185‑3987465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.