| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 1 (0.020) | 49 (0.840) | 41/284 | 0.4 | 98.0% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGC > NC_000913/4001507‑4001787 | agtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagagatcgacgcatcggcccgtttctttgaagacgacgccggcctgcatc > 2:843940‑M2/143‑143 (MQ=255)agtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaacgggaagacatcgaagcatcggcacgtttctttgaaggcgacgacggcctgcatc > 2:362314‑M2/143‑143 (MQ=255) tggattgatcttggcgaaccggacgacgaccagcgactgcgcgtacaagctgaactgggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCct < 2:376610‑M2/5‑1 (MQ=255) ggttgatcgtgccgaaccggacgactacgagcgacggcgcgtacagtctgaacttggccagagcctggctttccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttc < 2:517725‑M2/7‑1 (MQ=255) cttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttct < 1:417062‑M2/14‑1 (MQ=255) tcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGa < 2:492014‑M2/18‑1 (MQ=255) accggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGAt > 2:939095‑M2/122‑143 (MQ=255) caccgacgaGGTACTGCGCCTACAAGCTGAACCTGGCCGGAGCCGGGCATGCCGCCCGGAACTGGAAGACATCGGAGGATCGGCACGTTTCTTCGAAGACGCCGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCTGaa < 1:887298/140‑1 (MQ=255) gacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctgtgcagacgacgacggcctgcatCTGATTCGTCGTCTTTGGAGACGCgg > 1:158209‑M2/118‑143 (MQ=255) cgcgacgggcgactgcgcctacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgcagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAg < 1:398542‑M2/29‑1 (MQ=255) gacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGGAGAtgcggacgctc > 2:595345‑M2/112‑138 (MQ=255) agcgactgcgcgtacaatctgaactgggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGc < 2:495756‑M2/36‑1 (MQ=255) gcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGcc < 2:695324‑M2/37‑1 (MQ=255) gcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGAGGCGGGAGATCACGcc > 2:768736‑M2/107‑143 (MQ=255) ctgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACgccgcga > 2:727386‑M2/103‑140 (MQ=255) tgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa > 2:807247‑M2/102‑143 (MQ=255) tgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa > 2:1015653‑M2/102‑143 (MQ=255) cgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACt < 1:694521‑M2/44‑1 (MQ=255) gcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatagcagcatcggcacgggtctttggagacgacgacggccggcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGAGCTCGCCGGGAACTc > 2:49940‑M2/99‑143 (MQ=255) gtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagaggacgacggcctgcatCTCCTTCTTCTTCTTTGAAGCTGCGGAAGATCACGCCGGTAACTCCa > 2:508066‑M2/97‑143 (MQ=255) tctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGACGATGCGGAAGATCACGCCGGTAACTCCACTGTgg > 2:919780‑M2/91‑143 (MQ=255) tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCa < 1:908132‑M2/55‑1 (MQ=255) tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCa > 2:495573‑M2/89‑143 (MQ=255) aacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAtt < 2:454770‑M2/57‑1 (MQ=255) cttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTa < 2:247386‑M2/59‑1 (MQ=255) ttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCGTCTTCTTCTTTGAAGATGCGGGAGATGACGCCGGTAACTCCACTTTGGCATCTAc > 2:262865‑M2/84‑143 (MQ=255) aaccggcccggaactggaagacatcgaagcatcggcacgtttctttgaagactacgacggcctgcacCTCTTAATACTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTTGCATTTACCATCCGTGATGgtcgt < 1:254182‑M2/76‑1 (MQ=255) ccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTg > 1:787177‑M2/65‑143 (MQ=255) ccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTa > 1:304766‑M2/61‑143 (MQ=255) cggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACGCCACTGTGGCGTTtactgtccgagatgcccaactgattac > 2:344729‑M2/60‑130 (MQ=255) ggaagacatcgaagcctcggcacgtttccttgcagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTCGCATTTACCCTCCGTGATGGTCGTCTGTTTACTCTgcgt < 2:238486‑M2/91‑1 (MQ=255) gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtg > 2:541048‑M2/52‑143 (MQ=255) gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCAGTGATGGTCGTCTGTTTACTCTgcgtg > 2:49092‑M2/52‑143 (MQ=255) aagacatcgaagcatcgtcacgtttctttgaagaccacgacggcctgcatCTCCTCCCTCTCCTGTGAAAATGCAAAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtga < 2:231550‑M2/93‑1 (MQ=255) aagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtga < 2:304766‑M2/93‑1 (MQ=255) cgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 2:688862‑M2/100‑1 (MQ=255) cgaagcatcggcacgtttcgttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 1:1015653‑M2/100‑1 (MQ=255) attggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGACCACGCCGGTAACTCCACTGCGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGccc > 2:908397‑M2/38‑143 (MQ=255) gcacgtttcttggaagacgtggccggcctgcatCTCCTTCGTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCtt < 1:76473‑M2/110‑1 (MQ=255) tttctttgaagacgacggcggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGt < 1:299686‑M2/115‑1 (MQ=255) tttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCAAGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTCCTGTGGGTTGGGGTGGACTGCCCGCTTTTAGt > 2:420244‑M2/29‑143 (MQ=255) tctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTGCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt < 1:867417‑M2/117‑1 (MQ=255) tctttgaagacgacgacggcctgcatCTCCTTCTGCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCGACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt < 1:200070‑M2/117‑1 (MQ=255) ctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAAGTCAACTGTGGCATTTAACATCCGTGATGGTCGTCGGTTTACTCTGCGTGAGCGTGGACTGCCGTCTTTTCGGCTg > 2:297591‑M2/26‑143 (MQ=255) tgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTAt > 2:838003‑M2/23‑143 (MQ=255) gcagacgacgacggcctgcatCTCCGTCTTCGTCTTTGAAGATGCGGAAGAGCACGCCGGTAACTCCACTGTGGCAGTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATc < 2:918813‑M2/122‑1 (MQ=255) agacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTGTCGTCTGTATCGt > 2:108220‑M2/20‑143 (MQ=255) gacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTa > 1:695487‑M2/19‑143 (MQ=255) gacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTg < 2:787177‑M2/131‑1 (MQ=255) gcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTCTCGGCTGTATCGTCTGCGTGCCCGTAGc > 2:5794‑M2/5‑143 (MQ=255) | GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGC > NC_000913/4001507‑4001787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |