New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4049902 =	3 (0.050)	68 (1.160)	57/284	0.0	95.8%	noncoding (5/109 nt)	spf	Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent
	?	NC_000913	4498182 =	NA (NA)					intergenic (+241/‑91)	intB/insC1	pseudogene, integrase homology,IS, phage, Tn, Phage‑related functions and prophages, KpLE2 phage‑like element, P4‑like integrase/IS2 repressor TnpA

GGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAG  >  NC_000913/4498043‑4498320                                                                                                                                            |                                                                                                                                           ggggggATTATCAGAATCCGCGGTTATTCATTATTTATAGACATTCAATAAAAAAGTAACCTCATGTTCACGGCGTGAGTCACTGGGTGATGCCTAATAACCGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGa                                                                                                                                         <  2:1012770/143‑1 (MQ=255)   ggggATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACt                                                                                                                                       <  1:483288/143‑1 (MQ=255)   ggggATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGAAGCGCGATAACTGACGTAAGCACTGCTGCAGGGAATTGATGGTCCGTTGTAGACt                                                                                                                                       >  1:246162/1‑143 (MQ=255)     ggATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTgg                                                                                                                                     >  1:858711/1‑143 (MQ=255)       aTTATCAGAATCCGCGGTTATTCATTATTTATATACATTCACTAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTGAGGAGTGCTGCAGGGATTTGATGGTCCGTCGTGGACTGGcc                                                                                                                                   >  2:896556/1‑143 (MQ=255)       aTTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGcc                                                                                                                                   <  2:693127/143‑1 (MQ=255)           tCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGCTGGTCTCTTGGATACTGTCCGCCt                                                                                                                               >  2:676034/1‑143 (MQ=255)           tCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCt                                                                                                                               <  2:728575/143‑1 (MQ=255)           tCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCt                                                                                                                               <  2:852247/143‑1 (MQ=255)             aGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGa                                                                                                                             <  2:342461/143‑1 (MQ=255)             aGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGa                                                                                                                             >  1:791401/1‑143 (MQ=255)                  ccGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATCACTGACGTAAGGAGTGCCGCAGGGATTTGATGGTCCCTGGTAGACTGGCGCCCTGAAtctc                                                                                                                        >  1:818383/1‑143 (MQ=255)                    gaggTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCa                                                                                                                      <  1:381301/141‑1 (MQ=255)                     cgGTTATTCATTCTTTCTATACATTCAATAAAAAAGTACCCTCATAACCAAACCAGTGTGCACTGTCTGATGCGGGATAACGGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAg                                                                                                                     <  2:740431/143‑1 (MQ=255)                       gtgaTTCATTATGTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAGGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGAc                                                                                                                   <  1:668779/140‑1 (MQ=255)                       gTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGAc                                                                                                                   <  1:959191/143‑1 (MQ=255)                         tATGCAGTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACaa                                                                                                                 <  2:622430/143‑1 (MQ=255)                              attattTATATACATTCAATAAAAAAGTAAGGGTACGGCAAGTCCAGTACTCACAGCGTGATGCGGTACAGCTGACAGAAGGAGGGCTCCAGGGCATGGAGGGACCCCGGCAGACGGGCCCCCCGAATCTCCACACAACCacg                                                                                                            >  1:613536/1‑141 (MQ=255)                                  ttcacataCATTCAATAAAAGAGTAACCTCATAGAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCa                                                                                                        <  2:218664/138‑1 (MQ=255)                                    tatataCATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACt                                                                                                      <  1:590092/143‑1 (MQ=255)                                       ataCATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTCGACTGGCGCCCTGAATCTCCAGACAACCACTATCACCTaa                                                                                                   >  1:930674/1‑143 (MQ=255)                                       ataCATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGGGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTaa                                                                                                   <  2:579564/143‑1 (MQ=255)                                         aCATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATAACTTAAAt                                                                                                 >  2:747568/1‑143 (MQ=255)                                         aCATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTGGTCGACTGGCCCCCTGAACCTCCAGCCCACCTCTATCACTaaagt                                                                                                 >  1:244860/1‑141 (MQ=255)                                         aCATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGAAGGGATGTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAAt                                                                                                 >  2:554142/1‑143 (MQ=255)                                           aTTCAATAAAGAAGTAACCTCATAGAAAATCCTGTTCTCGCAGGGTGGTGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGTGTGGCCCCCTAAATCTCCAGACAACCAATATCACTTAAATaa                                                                                               <  1:885120/143‑1 (MQ=38)                                           aTTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGCAATATTTCGTTAGTTGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATaa                                                                                               <  2:740185/143‑1 (MQ=37)                                             tCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATCAGt                                                                                             >  2:907512/1‑143 (MQ=255)                                               aaTAAAAAACTAACCTCATACAAAATCCTGTACTCACAGGGTGATGCGGTATAACTGACGTAAGGAGTGCTGCAGGGATTTGATTGTTCTTTGGATACTGGGCCCATCAAGATCTAGACAACCAATATCACTTAAATAAGTGa                                                                                           <  1:73264/143‑1 (MQ=255)                                                  aaaaaaGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAg                                                                                        >  2:614412/1‑143 (MQ=255)                                                    aaagGTAACCTCATAAAAAGTCCTGTGCTCACGGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATGTGATGGTCCCTTGTAGACTGGCCCCCAGTTAGTACAGGGGACCAATATCATCTATATAAGTGATAGTc                                                                                      <  1:725952/143‑1 (MQ=255)                                                    aaaaGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCGTGTAGACTGGCCCCCGGAATCTCCAGACAACCAATATCACTTGAATAAGTGATAGtg                                                                                      >  2:245892/1‑142 (MQ=255)                                                     aaaGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTATTTAAGTGATattgg                                                                                     <  2:858711/143‑5 (MQ=255)                                                       aGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTa                                                                                   <  1:44712/143‑1 (MQ=255)                                                        gTAACCTCATACAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTaa                                                                                  <  2:154989/143‑1 (MQ=255)                                                             cTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTa                                                                             <  2:248875/143‑1 (MQ=255)                                                             cTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTa                                                                             >  2:561484/1‑143 (MQ=255)                                                             cTCAGAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTa                                                                             <  1:830788/143‑1 (MQ=255)                                                              tCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGGTTTGATGGTCTCTTGTAGACTGGCCCCCTGAATCTCCAGACGACCAATATCACTTAAATAAGTGATAGTCTTAATACTAg                                                                            >  2:93056/1‑143 (MQ=255)                                                              tCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAGTACTAg                                                                            >  2:347961/1‑143 (MQ=255)                                                                aTAAAAAATCCTGTACTCACAGGGTGATGCTGGATAACTGACGTAAGGCGTGCTGCAGGGATACAATGGTGCCTTGTAGACTGGCCCCCTGGATCGCCAGACAACCCATCGCGCTTAAATCAAGGATAGGCTCAAtcccaggt                                                                          >  1:196198/1‑136 (MQ=255)                                                                    aaaaTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTa                                                                      <  1:138224/143‑1 (MQ=255)                                                                        tCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTGGACt                                                                  >  2:506828/1‑143 (MQ=255)                                                                        tCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACt                                                                  >  2:977263/1‑143 (MQ=255)                                                                        tCCTGTACTCACAGGGTCATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACt                                                                  <  2:613626/143‑1 (MQ=255)                                                                         ccTGTGTTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATGTGATGGTCCCTTGTAGAATGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTa                                                                 <  1:382631/143‑1 (MQ=255)                                                                         ccTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTa                                                                 <  2:857179/143‑1 (MQ=255)                                                                          cTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGATTAg                                                                >  2:911548/1‑143 (MQ=255)                                                                           tGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGGCTTAATACTAGTTTTTAGACGAGt                                                               >  2:13216/1‑143 (MQ=255)                                                                                gcgcaGGGTGATGCGGGATAACTGACGGAAGGAGTGCTGCAGGGGTTTGGTGGTCCCACCTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTg                                                          <  2:465850/140‑1 (MQ=18)                                                                                  acaGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGga                                                        >  2:41854/1‑143 (MQ=255)                                                                                  acaGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGga                                                        >  1:906493/1‑143 (MQ=255)                                                                                            gCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAgatga                                              <  2:944613/143‑1 (MQ=255)                                                                                              gggATAACTGACGTAAGGAGTGCTGCATGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATAACTTAAATAAGTGATAGTCTTAATACTCGGACTTCAACTAGTCATTGGAGAACAGAtgatt                                            >  1:397571/1‑143 (MQ=18)                                                                                                gATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGAtgattga                                          >  2:101991/1‑143 (MQ=255)                                                                                                 aTAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGAtgattgat                                         <  1:511380/143‑1 (MQ=255)                                                                                                   aaCTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGt                                       <  1:296990/143‑1 (MQ=255)                                                                                                      tGACGTAAGGAGTGCGGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTCATGTCtt                                    >  1:774027/1‑143 (MQ=255)                                                                                                       gACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTa                                   <  1:845165/143‑1 (MQ=255)                                                                                                             aGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCg                             <  2:543127/143‑1 (MQ=255)                                                                                                                   gctgcAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGaaa                       <  1:292537/143‑1 (MQ=255)                                                                                                                    ctgcAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATCGGTGCACAGGTGATTGATGTCTTCGGGCGGGAGCAAc                      >  2:628489/1‑143 (MQ=17)                                                                                                                      gcAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGc                    >  1:632034/1‑143 (MQ=255)                                                                                                                       cAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCTGAGAAACGCa                   >  1:801362/1‑143 (MQ=255)                                                                                                                               tGATGGGCCCTTGTAGACTGACCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGt           <  2:780292/143‑1 (MQ=255)                                                                                                                                 aTGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGGCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTAc         >  1:120088/1‑143 (MQ=38)                                                                                                                                    gTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGCGATAGTCTTAATACTAGTTTTTAGACTAGACATTGGAGAACAGCTAATTGATGACTTAGCGCCGGAGAAACGCAGACGGCGTACcac      >  1:185080/1‑143 (MQ=11)                                                                                                                                      cccTTGTTGACTGGCACTCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACcacac    <  1:762658/143‑1 (MQ=16)                                                                                                                                       ccTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGACACGCAGACGGCGTCCcacaca   >  1:178263/1‑143 (MQ=18)                                                                                                                                       ccTTGTAGACGTGCCCCCTGAATCCCCAGACAACCAACATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTCGGCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACcacaca   <  2:233436/143‑1 (MQ=11)                                                                                                                                        ggtGTAGACTGGCCACCTGAATCCCCAGACAACCAATATCACTTAAATAAGGGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAg  <  2:59985/141‑1 (MQ=2)                                                                                                                                            |                                                                                                                                           GGGGGGATTATCAGAATCCGCGGTTATTCATTATTTATATACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGTCCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAG  >  NC_000913/4498043‑4498320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.