Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,977,560 Δ33 bp coding (964‑996/1032 nt) galR → galactose‑inducible d‑galactose regulon transcriptional repressor, autorepressor

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2977560 2977592 33 60 [1] [0] 59 galR galactose‑inducible d‑galactose regulon transcriptional repressor, autorepressor

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 29775591 (0.020)53 (0.860) 47/276 0.2 99.1% coding (963/1032 nt) galR galactose‑inducible d‑galactose regulon transcriptional repressor, autorepressor
?NC_000913 2977593 = 0 (0.000)coding (997/1032 nt) galR galactose‑inducible d‑galactose regulon transcriptional repressor, autorepressor

GTGCTGGTGTCACGCTATGTGCGTCCGCGCCTGACCACCGTGCGTTACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCA  >  NC_000913/2977419‑2977701
                                                                                                                                            |                                                                                                                                              
gtgCTGGTGTCACGCTATGTGCGTCCGCGCCTGACCACCGTGCGTTACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtc                                                                                                                                              >  2:969192‑M1/1‑141 (MQ=255)
      gtgtCACGCTATGTGCGTCCGCGCCTGCCCGCCGTGCGTCACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctgga                                                                                                                                        <  2:754213‑M1/143‑9 (MQ=255)
       tgtgACGCTATGGGCGTCCGCGCCTGACCACCGTGCGTCACCCGATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCGCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggag                                                                                                                                       <  2:177640‑M1/143‑10 (MQ=255)
           aCGCTATGTGCGTCCGCGCCTGACCACCGTGCGTTACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTACTGTCTTTTGTCCTCCGCttgacgcac                                                                                                                                   >  1:33435/1‑135 (MQ=255)
                 tgtgCGTTCGCGTCTGACCACCGTGCGTTAGCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatc                                                                                                                             <  1:1048973‑M1/143‑20 (MQ=255)
                   tgCGTCCGCGCCTGACCACCGTGCGTTACCCAATCGTGACGATGGCGACCACGGCTGCCTAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcat                                                                                                                           <  1:932178‑M1/143‑22 (MQ=255)
                    gCGTCCGCGCCTGACCAGCGTGCGTTACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGTTTTGGCTGATAATCGCCTTCTTCCGGAAATCACTAATGTCTTTAGTCCGgcgctggaggcaagtcatcatg                                                                                                                          <  1:483323‑M1/143‑23 (MQ=255)
                     cGTCCGCGCCTGACCACCGTGCGTTACCCAATCGTGACGATGGCGACCCAGGCTCCCGAACTGTCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggcggcaagtcatcatgc                                                                                                                         >  1:416957‑M1/1‑120 (MQ=255)
                         cgcgCCTGACCACCGTGCGTTACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTCATGTCGTTAGTCCGtccccggaggcaagtcaacatgcaaac                                                                                                                     >  2:336133‑M1/1‑116 (MQ=255)
                          gcgcCTGACCACCGTGCGTTACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaacca                                                                                                                    >  1:423953‑M1/1‑115 (MQ=255)
                            gcCTGACCACCGTGCGTTACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTGCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcagggcctcctgccaccagc                                                                                                                  >  1:723600‑M1/1‑113 (MQ=255)
                              cTGACCCCCGTGCGTTACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcga                                                                                                                <  1:189812‑M1/143‑33 (MQ=255)
                                gACCACCGTGCGTTACCCAATCGTGACGATGGCGACCCAGGCCGCCGAACTGGCTTTGGCGCTGGCGGATAATCGACCTCTCCCGGAAATAACTAATGTCTTTAGTCCGtcgatagaggcagagcatcatgcaacaaacgact                                                                                                              >  2:275339‑M1/1‑109 (MQ=255)
                                   caccGTGCGTTACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaac                                                                                                           >  1:225783‑M1/1‑106 (MQ=255)
                                      cGTGCGTTACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACCAATGTCTTTAGTCCGtcgctggcggcacgtcaccatgccaccagccaccaacccc                                                                                                        >  1:467761‑M1/1‑103 (MQ=255)
                                       ttgCGTTACCCGATCGTGACGATGGCGCCCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgca                                                                                                       <  2:146526‑M1/142‑42 (MQ=255)
                                            ttACCCAATCGGGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggagccaagtcatcatgcaaccagcgactaaccgcagttaa                                                                                                  <  1:720635‑M1/143‑47 (MQ=255)
                                             tACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaa                                                                                                 <  1:961725‑M1/143‑48 (MQ=255)
                                             tACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggaaagtcatcatgcaaccagcgactaaccgcagttaaa                                                                                                 <  2:611900‑M1/143‑48 (MQ=255)
                                             tACCCAAGCGTGACGATGCCGGCCCAGGCTGCCGAACTGGTTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAAGCACTGTTGTCTGTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgtctaaccgcagttaaa                                                                                                 <  2:939549‑M1/143‑48 (MQ=255)
                                                  aaTCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaat                                                                                            >  2:246221‑M1/1‑91 (MQ=255)
                                                     cGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattcc                                                                                         >  1:571500‑M1/1‑88 (MQ=255)
                                                              ggCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagg                                                                                >  1:464435‑M1/1‑79 (MQ=255)
                                                                     cAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCGTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattctt                                                                         <  2:296216‑M1/143‑72 (MQ=255)
                                                                          tGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgcccgtcattcttcgatg                                                                    >  1:163487‑M1/1‑67 (MQ=255)
                                                                          tGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaatccttcgctg                                                                    >  2:402302‑M1/1‑67 (MQ=255)
                                                                            ccGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggt                                                                  >  1:820324‑M1/1‑65 (MQ=255)
                                                                               tacTGGCTTTGGCGCTGGCGGATAACCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctg                                                               <  2:273925‑M1/142‑82 (MQ=255)
                                                                                aatggctgttcctctggaggataatctCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctgg                                                              <  1:804627‑M1/130‑83 (MQ=255)
                                                                                aCTGGCTTTGGCGCTGGCGGATAGTCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctgg                                                              <  2:89817‑M1/143‑83 (MQ=255)
                                                                                 ctggctggGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggc                                                             <  1:9865‑M1/143‑84 (MQ=255)
                                                                                    gCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgac                                                          >  1:605325‑M1/1‑57 (MQ=255)
                                                                                          gcgcTGGCGTATAATCGCCCTCTCCCGGAAATCATTAATGTTTTTTGTCCGacactggaggcaagtcaacaggcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaa                                                    <  1:1055792‑M1/143‑93 (MQ=255)
                                                                                          gcgcTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgcctaaccgcagtcaaagcaattccagcgccagtaactcttcgacggtctggcgacggcgaa                                                    >  2:965002‑M1/1‑51 (MQ=255)
                                                                                            gcTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggctaatc                                                  >  2:410337‑M1/1‑49 (MQ=255)
                                                                                               ggCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaac                                               <  1:859371‑M1/143‑98 (MQ=255)
                                                                                                  tgaTAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCTtcgctgtaggcaagtcatcatgcaacaagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgc                                            <  1:726664‑M1/142‑101 (MQ=255)
                                                                                                    aTAATCGCCCTCTCCCGGAAAGCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccggcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgc                                          <  2:476348‑M1/143‑103 (MQ=255)
                                                                                                        tCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaaggcatcatgcaaccagcgactaaccgcaggtaaagcaattccagcgccagtaattctccgatggtctggcgacggcgactcaaccgcgccagc                                      >  2:425118‑M1/1‑37 (MQ=255)
                                                                                                           cccTCTCCCGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgcctgacca                                   >  1:1074914‑M1/1‑34 (MQ=255)
                                                                                                             cgcggccggaagTCAGTAATGTGTTTAGTCCGtctctggaggcaagtcatcatgcagccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgcctgaccatt                                 <  2:326851‑M1/138‑112 (MQ=255)
                                                                                                                 cccGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgcctgaccattatca                             <  1:795291‑M1/143‑116 (MQ=255)
                                                                                                                  ccGGAAATCACTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtacttcttcgatggtctcgcgacggcgaatcaaccgcgcctgaccattctcag                            >  1:907905‑M1/1‑27 (MQ=255)
                                                                                                                      aaaTCACTAATGTCTTTAGTTCGtcgcttgaggcaattcatcatgcaacctgcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgcctgaccattatcaaacag                        <  1:273662‑M1/143‑121 (MQ=255)
                                                                                                                            cTAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaacgcaattccagcgccagtaattcttcgatggtctggcgccgccgcctcaaccgcgcctgcccattatcaaccagaacttc                  >  2:382442‑M1/1‑17 (MQ=255)
                                                                                                                             tAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcacccgcgcccgaccattatcacaccgaacttct                 >  1:677731‑M1/1‑16 (MQ=255)
                                                                                                                             tAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaatgcttcgatggtctggcgacggcgaatcaaccgcgcctgaccattatcaaacagaacttct                 >  2:545813‑M1/1‑16 (MQ=255)
                                                                                                                             tAATGTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccccagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgcctgaccattatcacacaggacttct                 >  1:490632‑M1/1‑16 (MQ=255)
                                                                                                                              aaTGTCTGTAGTGCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgcctgaccattatcaaacagaacttctg                <  2:685317‑M1/143‑129 (MQ=255)
                                                                                                                                 gTCTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattcaagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgcctgaccattatcaaacagagcttctggta             >  2:1033927‑M1/1‑12 (MQ=255)
                                                                                                                                  cggctggtccgtcgctgtaggcaagtcatcatccgaccagcgagtaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgcctgaccattatcaaacagaacttctggtaa            <  2:103116‑M1/137‑133 (MQ=255)
                                                                                                                                   cTTTAGTCCGtcgctggaggcaagtcatcatgcaaccagcgaccaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgcctgaccattatcaaacagaacttctggtaac           <  1:161745‑M1/143‑134 (MQ=255)
                                                                                                                                    tttAGTCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgcctgaccatcatcaaacgggacttctggtaaca          >  2:936461‑M1/1‑9 (MQ=255)
                                                                                                                                    ttcagtcCGgcggtggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgcctgaccattatcaaacagaacttctggtaaca          <  1:732167‑M1/140‑135 (MQ=255)
                                                                                                                                      ttgtgcgtcgctggagggacgtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgcctgaccattatcaatcagaacttctggtaacagc        <  2:877980‑M1/138‑137 (MQ=255)
                                                                                                                                         tCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttcaagcaattcccgcgccaggaattgttcgctggtctggagacggcgaatcaacagcgactgaccattatcaacaagagcttctggtaacagcgga     >  2:160160‑M1/1‑4 (MQ=255)
                                                                                                                                         tCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgcctgaccattatcaaacagaacttctggtaacagcgga     <  2:605325‑M1/143‑140 (MQ=255)
                                                                                                                                         tCCGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgcctgaccattatcaaacagaacttctggtaacagcgga     <  1:270915‑M1/143‑140 (MQ=255)
                                                                                                                                           cGtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgcatcaaccgcgcctgaccattatcaaacagaactgctggtaacagcggccg   >  1:1055257‑M1/1‑2 (MQ=255)
                                                                                                                                            gtcgctggaggcaagtcatcatgcaaccagcgactaaccgcagttaaagcaattccagcgccagtaattcttcgatggtctggcgacggcgaatcaaccgcgcctgacaattatcaaacagaacttccagtaacagcggacgg  >  2:750707‑M1/1‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                              
GTGCTGGTGTCACGCTATGTGCGTCCGCGCCTGACCACCGTGCGTTACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCA  >  NC_000913/2977419‑2977701

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.