| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 2 (0.030) | 57 (0.890) | 48/284 | 0.2 | 96.6% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 2 (0.030) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
ATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTG > NC_000913/4001505‑4001779 | aTGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCCACCCGCCCGGAACTGGAAGACATCGACGCATCGGCACGTTTCTTTCAAGACGACGGAGGCCCGCACctcc > 2:156493‑M1/1‑139 (MQ=255) ggATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGACCTTGGCTTTGGCCTGGGAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctt < 1:813093‑M1/143‑7 (MQ=255) tgcatccTGTCCACCCCGACGACGACTAGCGACTGCGCGTACCATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCAGCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttctt < 1:482414‑M1/140‑10 (MQ=255) gATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCCCGCTTCTGTGAAGACGACGACGGCAAGCATctcgctctcct > 2:919700‑M1/1‑132 (MQ=255) aTCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctt < 2:949966‑M1/143‑13 (MQ=255) tCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttga > 2:378998‑M1/1‑125 (MQ=255) cGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACCTGGCCAGAGCCTGGCACCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa < 1:628741‑M1/143‑20 (MQ=255) gAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaag > 1:662495‑M1/1‑123 (MQ=255) aCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagat > 1:407638‑M1/1‑121 (MQ=255) cGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaaaatgc < 2:1041293‑M1/143‑25 (MQ=255) gacgacgacGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgg > 1:708632‑M1/1‑117 (MQ=255) cgacgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa < 1:1035387‑M1/143‑29 (MQ=255) cgacgacgaGCGACTGCGCGTACAATCTGAACGTGGCCAGAGCGTGGCAACCCGCCCGGAACTGGAAGACAGCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa < 1:869413‑M1/143‑29 (MQ=255) gacgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgtggaag < 1:1068890‑M1/143‑30 (MQ=255) gacgaGCGACTTCGCGTACAATCTGATTTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatc < 1:317266‑M1/143‑33 (MQ=255) gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggacgagc > 1:287256‑M1/1‑111 (MQ=255) gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgcaagatc > 1:789236‑M1/1‑111 (MQ=255) gACTGCGCGTACAATCGGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGGAGACATCGAAGCATCGGCCCGTTTCTTCGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccgg < 2:732549‑M1/143‑40 (MQ=255) aCTGCTCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggt < 1:579322‑M1/143‑41 (MQ=255) ggcttacaaTCCAAGCTGGCCCAGAGCCTGCCAACCCGCCCGGAACTGCAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaact < 2:525229‑M1/139‑45 (MQ=255) gcgcACGATCTGAGCTTGGCCAGGGCCTGGCAACCCGCCCGGAACTGGAAGACGTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactc < 2:1013391‑M1/143‑46 (MQ=255) gcgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgacgatgcggaagatcacgccggtacctc > 1:501992‑M1/1‑98 (MQ=255) gTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGCTTCTTTGAAGACGACGTGGTCCTGCAGctccctcttcttctttgaagctgcggaacatcacgccggcacctcca > 1:1108487‑M1/1‑96 (MQ=255) tACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccac > 1:274708‑M1/1‑95 (MQ=255) tACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccac > 2:138811‑M1/1‑95 (MQ=255) tctcAACTCGGCCAGAGCCCGCCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTGCTCTGCACACGACGACGGCCTGCATgtccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtgg < 1:187749‑M1/143‑54 (MQ=255) tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGCAGACCACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtcactccactgtgg > 1:395476‑M1/1‑90 (MQ=255) tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGAAGctcctccttcttctttgaagatgcggaagatcacgccggtaactccactgtgg < 2:494967‑M1/143‑54 (MQ=255) tCTGAACTTCGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtgg < 2:586481‑M1/143‑54 (MQ=255) gAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATGGAAGCATCGGCACGGTTCTTTGAAGCGGACGACGGCCTGC‑‑‑‑‑CACCCCTTCCTCGTCCTCGACGATGCGGAAGACGCCGCCGGGAACTCCACCGTGGCaa > 2:540805/1‑142 (MQ=255) ggCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCACCACctccggtttgttgtttgaagatgcggaagatcacgccggtaactccaatgtggcatttacca > 1:253195‑M1/1‑81 (MQ=255) gCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTCCCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggacgatcacgccggtcactccactgtggcctttgccac > 2:455345‑M1/1‑80 (MQ=255) cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggacgatcacgccggtaactccactgtggcatttaccatcc > 2:708649‑M1/1‑78 (MQ=255) gagCCTGGCAGCCCGCCCGGAACTGGAAGACATCGAAGCATCTGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgt < 2:1115971‑M1/143‑68 (MQ=255) gagCCTGGCACCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccctcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgt < 1:38104‑M1/143‑68 (MQ=255) agCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtg < 1:378998‑M1/143‑69 (MQ=255) ccaATCCGCCCGGAACTTGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtc < 2:63952‑M1/142‑75 (MQ=255) cgcccgGAACTGGAAGACATCGAAGCATAGGCACGCCTCTGTCAAGACGAAGACGGGCTGCAT‑‑‑‑‑CTCATCCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGAAACTCCGTAGTGGCATTTGCCAGCCCCGATGgccggcggt > 2:619804/1‑138 (MQ=255) cgcccgGAACTGGAAGACACCGGAGCATCGGCACGTGTCTTTGATGACGACGACGGCCTGCAGctccttctgcttctttgaggttgcggaaggtcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgt < 1:282210‑M1/143‑81 (MQ=255) gcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtt > 1:175853‑M1/1‑62 (MQ=255) ccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta < 1:355516‑M1/143‑84 (MQ=255) cgGAACGGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttac < 1:11703‑M1/143‑85 (MQ=255) aaCTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactct > 1:612360‑M1/1‑56 (MQ=255) tGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcggctgtttagtctgag > 1:554158‑M1/1‑53 (MQ=255) ggAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctgcttcttctttgaagatgcggaagaacacaaagagatctccactgtggcattcaccatccgtaatgggcggctgtttaccctgcat > 2:126977‑M1/1‑52 (MQ=255) aCATCGAAGCATCGGCACGCTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgacgatgcggaagatcacgccggtcactccactgtggcatttaccatccgcgatggtcggcgggctcctctgcgtgcgcg > 2:462851‑M1/1‑47 (MQ=255) atccaggcgtgggcacgtttctttGGAGACGACGGCGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccaccgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtg < 2:942080‑M1/132‑99 (MQ=255) gCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgacctgc > 2:58450‑M1/1‑39 (MQ=255) gCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcagttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc < 2:206401‑M1/143‑105 (MQ=255) gCAGCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttgccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc < 1:266568‑M1/143‑105 (MQ=255) cATCGGCACGTTTCTTTGAAGACGACGCCGGCCTGCATctccttcttcttctttgacgatgcggaagagtacgctggtatctcccctgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcc < 1:466156‑M1/143‑106 (MQ=255) gCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggcagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgcgcgtgaactctccgctt > 2:198812‑M1/1‑33 (MQ=255) gttcTTTGAAGGCGACGACGGCCTGCATcgccgtcttcttcgtgggggatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtcggtttactctgcgtgagcgtgaactgcccgcttttcgt < 1:97649‑M1/142‑116 (MQ=255) ttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctgttcgcctgta > 2:768408‑M1/1‑23 (MQ=255) aGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcttgagcgtgaactgcccgcttttggtctgtatagt > 1:345432‑M1/1‑19 (MQ=255) gacgacgacGGCCTGCATctccttcttcttctgtgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgta < 1:679230‑M1/143‑126 (MQ=255) gCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgcgagcgtgaactgcccgcctttcgcctgtatcgcacgcgggcccc > 2:1059068‑M1/1‑8 (MQ=255) ccTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgt > 1:575574‑M1/1‑7 (MQ=255) ccTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgt > 1:22353‑M1/1‑7 (MQ=255) | ATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTG > NC_000913/4001505‑4001779 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |