| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 2 (0.030) | 57 (0.890) | 48/284 | 0.2 | 96.6% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 2 (0.030) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
TTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGT > NC_000913/4001510‑4001791 | atggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggccacccgcccggaactggaagacatcgacgcatcggcacgtttctttcaagacgacggaggcccgcacCTcc > 2:156493‑M2/140‑143 (MQ=255) ggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaccttggctttggcctgggaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCctt < 1:813093‑M2/6‑1 (MQ=255) tgcatcctgtccaccccgacgacgactagcgactgcgcgtaccatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcagcggcacgtttctttgaagacgacgacggcctgcatCTCcttctt < 1:482414‑M2/9‑1 (MQ=255) gatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcccgcttctgtgaagacgacgacggcaagcatctcgctctcct > 2:919700‑M2/133‑135 (MQ=255) atcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttctt < 2:949966‑M2/12‑1 (MQ=255) tcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGa > 2:378998‑M2/126‑143 (MQ=255) cgaaccggacgacgacgagcgactgcgcgtacaatctgaacctggccagagcctggcaccccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGaa < 1:628741‑M2/19‑1 (MQ=255) gaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAg > 1:662495‑M2/124‑143 (MQ=255) accggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGAt > 1:407638‑M2/122‑143 (MQ=255) cggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAAATGc < 2:1041293‑M2/24‑1 (MQ=255) gacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCgg > 1:708632‑M2/118‑143 (MQ=255) cgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa < 1:1035387‑M2/28‑1 (MQ=255) cgacgacgagcgactgcgcgtacaatctgaacgtggccagagcgtggcaacccgcccggaactggaagacagcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa < 1:869413‑M2/28‑1 (MQ=255) gacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGTGGAAg < 1:1068890‑M2/29‑1 (MQ=255) gacgagcgacttcgcgtacaatctgattttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATc < 1:317266‑M2/32‑1 (MQ=255) gacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAcgagc > 1:287256‑M2/112‑141 (MQ=255) gacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGCAAGATc > 1:789236‑M2/112‑143 (MQ=255) gactgcgcgtacaatcggaacttggccagagcctggcaacccgcccggaactgggagacatcgaagcatcggcccgtttcttcgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCgg < 2:732549‑M2/39‑1 (MQ=255) actgctcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGt < 1:579322‑M2/40‑1 (MQ=255) ggcttacaatccaagctggcccagagcctgccaacccgcccggaactgcaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACt < 2:525229‑M2/44‑1 (MQ=255) gcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGACGATGCGGAAGATCACGCCGGTACCTc > 1:501992‑M2/99‑143 (MQ=255) gcgcacgatctgagcttggccagggcctggcaacccgcccggaactggaagacgtcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTc < 2:1013391‑M2/45‑1 (MQ=255) gtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgcttctttgaagacgacgtggtcctgcagCTCCCTCTTCTTCTTTGAAGCTGCGGAACATCACGCCGGCACCTCCa > 1:1108487‑M2/97‑143 (MQ=255) tacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCAc > 1:274708‑M2/96‑143 (MQ=255) tacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCAc > 2:138811‑M2/96‑143 (MQ=255) gAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATGGAAGCATCGGCACGGTTCTTTGAAGCGGACGACGGCCTGC‑‑‑‑‑CACCCCTTCCTCGTCCTCGACGATGCGGAAGACGCCGCCGGGAACTCCACCGTGGCaa > 2:540805/1‑142 (MQ=255) tctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgcagaccacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTCACTCCACTGTgg > 1:395476‑M2/91‑143 (MQ=255) tctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgaagCTCCTCCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTgg < 2:494967‑M2/53‑1 (MQ=255) tctgaacttcgccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTgg < 2:586481‑M2/53‑1 (MQ=255) tctcaactcggccagagcccgccaacccgcccggaactggaagacatcgaagcatcggcacgttgctctgcacacgacgacggcctgcatGTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTgg < 1:187749‑M2/53‑1 (MQ=255) ggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggccaccacCTCCGGTTTGTTGTTTGAAGATGCGGAAGATCACGCCGGTAACTCCAATGTGGCATTTACCa > 1:253195‑M2/82‑143 (MQ=255) gccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtccctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGACGATCACGCCGGTCACTCCACTGTGGCCTTTGCcac > 2:455345‑M2/81‑142 (MQ=255) cagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGACGATCACGCCGGTAACTCCACTGTGGCATTTACCATcc > 2:708649‑M2/79‑143 (MQ=255) gagcctggcagcccgcccggaactggaagacatcgaagcatctgcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGt < 2:1115971‑M2/67‑1 (MQ=255) gagcctggcaccccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCCTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGt < 1:38104‑M2/67‑1 (MQ=255) agcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTg < 1:378998‑M2/68‑1 (MQ=255) ccaatccgcccggaacttgaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtc < 2:63952‑M2/74‑1 (MQ=255) cgcccgGAACTGGAAGACATCGAAGCATAGGCACGCCTCTGTCAAGACGAAGACGGGCTGCAT‑‑‑‑‑CTCATCCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGAAACTCCGTAGTGGCATTTGCCAGCCCCGATGgccggcggt > 2:619804/1‑138 (MQ=255) cgcccggaactggaagacaccggagcatcggcacgtgtctttgatgacgacgacggcctgcagCTCCTTCTGCTTCTTTGAGGTTGCGGAAGGTCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGt < 1:282210‑M2/80‑1 (MQ=255) gcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt > 1:175853‑M2/63‑143 (MQ=255) ccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTa < 1:355516‑M2/83‑1 (MQ=255) cggaacgggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTAc < 1:11703‑M2/84‑1 (MQ=255) aactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTActct > 1:612360‑M2/57‑143 (MQ=255) tggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGGCTGTTTAGTctgag > 1:554158‑M2/54‑141 (MQ=255) ggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTGCTTCTTCTTTGAAGATGCGGAAGAACACAAAGAGATCTCCACTGTGGCATTCACCATCCGTAATGGGCGGCTGTTTACCctgcat > 2:126977‑M2/53‑141 (MQ=255) acatcgaagcatcggcacgcttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGACGATGCGGAAGATCACGCCGGTCACTCCACTGTGGCATTTACCATCCGCGATGGTCGGCGGGCTCCTCTgcgtgcgcg > 2:462851‑M2/48‑143 (MQ=255) atccaggcgtgggcacgtttctttggagacgacggcggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACCGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgtg < 2:942080‑M2/98‑1 (MQ=255) gcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGACCTGc > 2:58450‑M2/40‑143 (MQ=255) gcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAGTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGc < 2:206401‑M2/104‑1 (MQ=255) gcagcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTGCCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGc < 1:266568‑M2/104‑1 (MQ=255) catcggcacgtttctttgaagacgacgccggcctgcatCTCCTTCTTCTTCTTTGACGATGCGGAAGAGTACGCTGGTATCTCCCCTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGcc < 1:466156‑M2/105‑1 (MQ=255) gcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGCAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGCGCGTGAACTCTCCGCtt > 2:198812‑M2/34‑143 (MQ=255) gttctttgaaggcgacgacggcctgcatCGCCGTCTTCTTCGTGGGGGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCGGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGt < 1:97649‑M2/115‑1 (MQ=255) ttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTGTTCGCCTGTa > 2:768408‑M2/24‑143 (MQ=255) agacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCTTGAGCGTGAACTGCCCGCTTTTGGTCTGTATAGt > 1:345432‑M2/20‑143 (MQ=255) gacgacgacggcctgcatCTCCTTCTTCTTCTGTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTa < 1:679230‑M2/125‑1 (MQ=255) gcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGCGAGCGTGAACTGCCCGCCTTTCGCCTGTATCGCACGCGGgcccc > 2:1059068‑M2/9‑142 (MQ=255) cctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGt > 1:575574‑M2/8‑143 (MQ=255) cctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGt > 1:22353‑M2/8‑143 (MQ=255) cTCCTTCTTCTGCTTTGAGGAGGCGGAAGATGATGCGGGTAACTCCTCTGGGGGTTTTACCATCCGTGTTGGTCGTGTGTTTGCTCTGCGTGGGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGt < 2:1108487/143‑1 (MQ=255) | TTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGT > NC_000913/4001510‑4001791 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |