Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,299,499 Δ1,199 bp intergenic (+254/‑485) ychE → / → oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1299499–1300697 1300697 1–1199 82 [0] [0] 85 ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12994980 (0.000)79 (1.230) 65/276 0.0 100% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

AGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT  >  NC_000913/1299363‑1299640
                                                                                                                                       |                                                                                                                                              
agttagttATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataa                                                                                                                                         >  2:263548‑M1/1‑136 (MQ=255)
 gttagttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataat                                                                                                                                        <  2:738632‑M1/143‑9 (MQ=255)
 attatctgcaagcatttcctTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTTGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataat                                                                                                                                        <  1:95428‑M1/134‑9 (MQ=255)
  ttagttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatc                                                                                                                                       >  1:870306‑M1/1‑134 (MQ=255)
  ttagttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatc                                                                                                                                       >  1:89452‑M1/1‑134 (MQ=255)
    agttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAACTGATATTATTAATTCCACTGCCTTTGGTCGAGGAAAGTGCTAAatactcatcaa                                                                                                                                     >  2:820988‑M1/1‑132 (MQ=255)
    agttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaa                                                                                                                                     <  1:472495‑M1/143‑12 (MQ=255)
     gttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGCCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGTGCACTGCTACataataatcaat                                                                                                                                    >  2:855770‑M1/1‑131 (MQ=255)
      ttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaatt                                                                                                                                   <  1:1119005‑M1/143‑14 (MQ=255)
          aaGGATTTCCTTAACTGCTTCTCCTCACCATCATTTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgtta                                                                                                                               <  1:742365‑M1/143‑18 (MQ=255)
          aaGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgtta                                                                                                                               >  1:1058415‑M1/1‑126 (MQ=255)
               tttCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatta                                                                                                                          <  1:206592‑M1/143‑23 (MQ=255)
                    ttAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattagtgtg                                                                                                                     >  2:377603‑M1/1‑116 (MQ=255)
                    ttAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCGTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtg                                                                                                                     >  2:895546‑M1/1‑116 (MQ=255)
                     tAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgc                                                                                                                    >  1:902692‑M1/1‑115 (MQ=255)
                        cTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatt                                                                                                                 <  1:725061‑M1/143‑32 (MQ=255)
                         tGCTTCTCCTCACTATCATGTTATTTTCGCCACATCATAATCCTTGTCTTGCTTAAGAATAATTGAATTTATATTATTAATTCCACTGCCTATGGAAGAGGAAAGTGCGAAataataatcaattgttaaattattgtgcattt                                                                                                                <  1:397629‑M1/143‑33 (MQ=255)
                         tGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTCAAGAAGCGGGGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcattt                                                                                                                <  1:1144144‑M1/143‑33 (MQ=255)
                            ttCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCCTGCTGAAGAATAATTGACATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttccc                                                                                                             >  2:269987‑M1/1‑108 (MQ=255)
                              ctcctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAACTGATATTATTAATTCCACTGCCCTTGGTAGAGGAAAGTGATCAaaaggaatgaattgttacatgattgtgcatttcacta                                                                                                           >  2:809767‑M1/1‑106 (MQ=255)
                              ctcctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcacta                                                                                                           <  2:663741‑M1/143‑38 (MQ=255)
                               tcctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttctctcc                                                                                                          >  1:307640‑M1/1‑105 (MQ=255)
                                cttcacCATCATGTTATTTTCTCAACATCATAATCCTGGGCTTGCTAAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactact                                                                                                         <  2:583310‑M1/141‑40 (MQ=255)
                                cctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactact                                                                                                         <  1:1004497‑M1/143‑40 (MQ=255)
                                 ctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactg                                                                                                        >  2:365411‑M1/1‑103 (MQ=255)
                                 ctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactg                                                                                                        >  2:1845‑M1/1‑103 (MQ=255)
                                 ctcACCATCATGTTATTTTCGCCACACCATAATCCTCGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactg                                                                                                        <  1:893550‑M1/143‑41 (MQ=255)
                                  tcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                                                                       >  2:1075277‑M1/1‑102 (MQ=255)
                                   cACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATCATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGCAAGTGCTAAataatattcaattgttaaattattgtgcatttcactactggc                                                                                                      >  1:751394‑M1/1‑101 (MQ=255)
                                      catcttGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaact                                                                                                   <  2:349693‑M1/143‑46 (MQ=255)
                                         caggttcTTTTCGCGACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgta                                                                                                <  2:1129843‑M1/140‑49 (MQ=255)
                                             ttATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatca                                                                                            >  2:362433‑M1/1‑91 (MQ=255)
                                               aTTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTGTGGGAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcacgactggaactgtaatcaga                                                                                          <  1:820988‑M1/143‑55 (MQ=255)
                                                  ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgggactgtaatcagaaaa                                                                                       <  1:701357‑M1/143‑58 (MQ=255)
                                                    cGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaaga                                                                                     >  1:27380‑M1/1‑84 (MQ=255)
                                                    cGCCACATCATAATCCTCGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattcttaaagtattgttcatttcactactggaactgtaatcagaaaaga                                                                                     <  1:48700‑M1/143‑60 (MQ=255)
                                                        acaTCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTCCCAAaatctaatcatttgttaaattattgtgcatttcactactggaactgtaatcagaaaagataga                                                                                 <  1:377603‑M1/143‑64 (MQ=255)
                                                        acaGCATAATCCTGAGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagataga                                                                                 <  1:1001762‑M1/143‑64 (MQ=255)
                                                        aaatcataaTCCTGGGCTTGCTGAAGAATAAGTGAACTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagataga                                                                                 >  2:193411‑M1/3‑80 (MQ=255)
                                                         catcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagat                                                                                >  1:885576‑M1/1‑79 (MQ=255)
                                                         catcatAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac                                                                                >  2:132375‑M1/1‑79 (MQ=255)
                                                          atcatAATCCTGGGCTTGCTGAAGAATACTTGAAATGATATTATTAATTCCACTGCCTTTGATAGAGGCAAGTGCTAAataataatcagttgttaaattattttgcgtttcactactggaactgtaatcagaacgggtagcaa                                                                               >  1:388138‑M1/1‑78 (MQ=255)
                                                            catAATCCTGGGCTTGTTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTGGGTGGAGGAAAGTGCTGAataataatcaatcgttaaattattgtgcatttcactactggagctgtaatccgcagagatagacatg                                                                             >  2:914490‑M1/1‑76 (MQ=255)
                                                            catAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatg                                                                             <  2:428704‑M1/143‑68 (MQ=255)
                                                                 tCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttag                                                                        <  1:744326‑M1/143‑73 (MQ=255)
                                                                   cTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagcc                                                                      >  2:985653‑M1/1‑69 (MQ=255)
                                                                    tGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCGTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactataatcagaaaagatagacatgcttagaca                                                                     >  2:1039017‑M1/1‑68 (MQ=255)
                                                                             tGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTCGTAGAGGAAAGTGCTAAataataatcaatcgttaaattattgtgcatttcactactggaactgtaatcagaaaagatcgacatgcttagcccatctctcct                                                            >  2:256573‑M1/1‑59 (MQ=255)
                                                                              gaagaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgtaactgtaatcagaaatgatagacatgcttagccaatcgctattt                                                           >  2:553355‑M1/1‑58 (MQ=255)
                                                                                agaaTAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttga                                                         <  1:362433‑M1/143‑88 (MQ=255)
                                                                                  aataatTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggatatgtaaccataagagatagacatgctcagccaatctctatttgatt                                                       >  1:834166‑M1/1‑54 (MQ=255)
                                                                                  aataatTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgatt                                                       >  1:635929‑M1/1‑54 (MQ=255)
                                                                                      atTGAAATGATATTATTAATTCCACTGTCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaat                                                   <  2:897991‑M1/143‑94 (MQ=255)
                                                                                       ttGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgcatt                                                  >  1:392458‑M1/1‑49 (MQ=255)
                                                                                       ttGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgaaactattctcagtaattttatacatgcttagccaatctctatttgattgaatt                                                  <  1:790535‑M1/143‑95 (MQ=255)
                                                                                         gAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattga                                                <  2:793595‑M1/143‑97 (MQ=255)
                                                                                         gAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattga                                                <  2:353445‑M1/143‑97 (MQ=255)
                                                                                          aaaTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctacttgattgaattgaa                                               <  2:888097‑M1/143‑98 (MQ=255)
                                                                                           aaTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaa                                              >  2:777325‑M1/1‑45 (MQ=255)
                                                                                           aaTGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaa                                              <  1:119031‑M1/143‑99 (MQ=255)
                                                                                                 attattAATTCCACTGCCTTTGGTAGAGGAAAGTGATAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgctgagccaatctctatttgattgaattgaaagatgtt                                        >  2:262091‑M1/1‑39 (MQ=255)
                                                                                                  ttattaAGTCGACTGTCGTTAGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgttt                                       <  2:638486‑M1/143‑106 (MQ=255)
                                                                                                   tattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttg                                      <  1:442133‑M1/143‑107 (MQ=255)
                                                                                                   tattaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttg                                      <  1:1044444‑M1/143‑107 (MQ=255)
                                                                                                     ttaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgtt                                    >  1:820245‑M1/1‑35 (MQ=255)
                                                                                                     ttaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgtt                                    <  1:985653‑M1/143‑109 (MQ=255)
                                                                                                     ttaATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgtt                                    <  1:913541‑M1/143‑109 (MQ=255)
                                                                                                      taATTCCACTGCCTTTGGTAGAGGAAAGTGCAATatataaaacaaaggttaaattattgtgcatttcactactggaactgtaatcataaaatatagacatgcttaaccaatctcaatttgaatgaattgaaagatgtttgtta                                   >  2:408503‑M1/1‑34 (MQ=255)
                                                                                                        aTTCCACTGTCTTTGGTAGAGGAAACTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaag                                 <  2:829431‑M1/143‑112 (MQ=255)
                                                                                                        aTTCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaag                                 >  1:996662‑M1/1‑32 (MQ=255)
                                                                                                         ttCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaagg                                >  1:614662‑M1/1‑31 (MQ=255)
                                                                                                             aCTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatgattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatg                            <  2:842645‑M1/143‑117 (MQ=255)
                                                                                                                 ccTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgcttgaattgaaagatgtttgttaaggcatggatg                        >  2:922748‑M1/1‑23 (MQ=255)
                                                                                                                   tttGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgca                      >  1:334332‑M1/1‑21 (MQ=255)
                                                                                                                       gTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagct                  >  1:573087‑M1/1‑17 (MQ=255)
                                                                                                                       gTAGAGGAAAGAGCTAAataataatcaattgttaaatgagtgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctacttgattgaattgaaagatgtttgttaaggcatggatgcaagct                  <  1:570894‑M1/143‑127 (MQ=255)
                                                                                                                             gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagat            >  1:659315‑M1/1‑11 (MQ=255)
                                                                                                                                 gTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctg        <  1:670293‑M1/143‑137 (MQ=255)
                                                                                                                                   gCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagccctgcttagccaatctctacttgaatgacttgaaaggtgtttgttacggcgtggaggccagctatagcttctgct      >  1:980442‑M1/1‑5 (MQ=255)
                                                                                                                                      aaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgcaagatgtttgttaaggcatggatgcaagctatagattctgatacg   >  1:96343‑M1/1‑2 (MQ=255)
                                                                                                                                       aataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagctaatctctatttgattgaattgaaagaggtttgttacggcatggatgcaagctatcgattctgatgcgg  >  1:247533‑M1/1‑1 (MQ=255)
                                                                                                                                       aataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacgg  <  1:836658‑M1/143‑143 (MQ=255)
                                                                                                                                       |                                                                                                                                              
AGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAATTCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTT  >  NC_000913/1299363‑1299640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: