BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,299,499	Δ1,199 bp	intergenic (+254/‑485)	ychE → / → oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1299499–1300697	1300697	1–1199	82 [0]	[0] 85	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1299498	0 (0.000)	79 (1.230)	65/276	0.0	100%	intergenic (+253/‑1684)	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
*	?	NC_000913	1300698 =	0 (0.000)	79 (1.230)	65/276	0.0	100%	intergenic (+1453/‑484)	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

GCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGT  >  NC_000913/1300562‑1300840

agttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataa                                                                                                                                          >  2:263548‑M2/137‑143 (MQ=255)

 gttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataat                                                                                                                                         <  2:738632‑M2/8‑1 (MQ=255)

 attatctgcaagcatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatccttggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataat                                                                                                                                         <  1:95428‑M2/8‑1 (MQ=255)

  ttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATc                                                                                                                                        >  1:870306‑M2/135‑143 (MQ=255)

  ttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATc                                                                                                                                        >  1:89452‑M2/135‑143 (MQ=255)

    agttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaactgatattattaattccactgcctttggtcgaggaaagtgctaaATACTCATCaa                                                                                                                                      >  2:820988‑M2/133‑143 (MQ=255)

    agttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCaa                                                                                                                                      <  1:472495‑M2/11‑1 (MQ=255)

     gttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctggccttgctgaagaataattgaaatgatattattaattccactgcctttggtagagtgcactgctacATAATAATCAAt                                                                                                                                     >  2:855770‑M2/132‑143 (MQ=255)

      ttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAtt                                                                                                                                    <  1:1119005‑M2/13‑1 (MQ=255)

          aaggatttccttaactgcttctcctcaccatcattttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTa                                                                                                                                <  1:742365‑M2/17‑1 (MQ=255)

          aaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTa                                                                                                                                >  1:1058415‑M2/127‑143 (MQ=255)

               tttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAatta                                                                                                                           <  1:206592‑M2/22‑1 (MQ=255)

                    ttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTAGtgtg                                                                                                                      >  2:377603‑M2/117‑143 (MQ=255)

                    ttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgccgttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtgtg                                                                                                                      >  2:895546‑M2/117‑143 (MQ=255)

                     taactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGc                                                                                                                     >  1:902692‑M2/116‑143 (MQ=255)

                        ctgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAtt                                                                                                                  <  1:725061‑M2/31‑1 (MQ=255)

                         tgcttctcctcactatcatgttattttcgccacatcataatccttgtcttgcttaagaataattgaatttatattattaattccactgcctatggaagaggaaagtgcgaaATAATAATCAATTGTTAAATTATTGTGCAttt                                                                                                                 <  1:397629‑M2/32‑1 (MQ=255)

                         tgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctcaagaagcggggaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAttt                                                                                                                 <  1:1144144‑M2/32‑1 (MQ=255)

                            ttctcctcaccatcatgttattttcgccacatcataatcctgggcctgctgaagaataattgacatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATttccc                                                                                                              >  2:269987‑M2/109‑141 (MQ=255)

                              ctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaactgatattattaattccactgcccttggtagaggaaagtgatcaAAAGGAATGAATTGTTACATGATTGTGCATTTCacta                                                                                                            >  2:809767‑M2/107‑143 (MQ=255)

                              ctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCacta                                                                                                            <  2:663741‑M2/37‑1 (MQ=255)

                               tcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATttctctcc                                                                                                           >  1:307640‑M2/106‑141 (MQ=255)

                                cttcaccatcatgttattttctcaacatcataatcctgggcttgctaaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactact                                                                                                          <  2:583310‑M2/39‑1 (MQ=255)

                                cctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactact                                                                                                          <  1:1004497‑M2/39‑1 (MQ=255)

                                 ctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTg                                                                                                         >  2:1845‑M2/104‑143 (MQ=255)

                                 ctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTg                                                                                                         >  2:365411‑M2/104‑143 (MQ=255)

                                 ctcaccatcatgttattttcgccacaccataatcctcggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTg                                                                                                         <  1:893550‑M2/40‑1 (MQ=255)

                                  tcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTgg                                                                                                        >  2:1075277‑M2/103‑143 (MQ=255)

                                   caccatcatgttattttcgccacatcataatcctgggcttgctgaagaatcattgaaatgatattattaattccactgcctttggtagaggcaagtgctaaATAATATTCAATTGTTAAATTATTGTGCATTTCACTACtggc                                                                                                       >  1:751394‑M2/102‑142 (MQ=255)

                                      catcttgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                                                                                                    <  2:349693‑M2/45‑1 (MQ=255)

                                         caggttcttttcgcgacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTa                                                                                                 <  2:1129843‑M2/48‑1 (MQ=255)

                                             ttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCa                                                                                             >  2:362433‑M2/92‑143 (MQ=255)

                                               attttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctgtgggagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACGACTGGAACTGTAATCAGa                                                                                           <  1:820988‑M2/54‑1 (MQ=255)

                                                  ttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGGACTGTAATCAGaaaa                                                                                        <  1:701357‑M2/57‑1 (MQ=255)

                                                    cgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGa                                                                                      >  1:27380‑M2/85‑143 (MQ=255)

                                                    cgccacatcataatcctcggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTCTTAAAGTATTGTTCATTTCACTACTGGAACTGTAATCAGAAAAGa                                                                                      <  1:48700‑M2/59‑1 (MQ=255)

                                                        acatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtcccaaAATCTAATCATTTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa                                                                                  <  1:377603‑M2/63‑1 (MQ=255)

                                                        acagcataatcctgagcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa                                                                                  <  1:1001762‑M2/63‑1 (MQ=255)

                                                        aaatcataatcctgggcttgctgaagaataagtgaactgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa                                                                                  >  2:193411‑M2/81‑143 (MQ=255)

                                                         catcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAgat                                                                                 >  1:885576‑M2/80‑142 (MQ=255)

                                                         catcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGAc                                                                                 >  2:132375‑M2/80‑143 (MQ=255)

                                                          atcataatcctgggcttgctgaagaatacttgaaatgatattattaattccactgcctttgatagaggcaagtgctaaATAATAATCAGTTGTTAAATTATTTTGCGTTTCACTACTGGAActgtaatcagaacgggtagcaa                                                                                >  1:388138‑M2/79‑133 (MQ=255)

                                                            cataatcctgggcttgttgaagaataattgaaatgatattattaattccactgccttgggtggaggaaagtgctgaATAATAATCAATCGTTAAATTATTGTGCATTTCACTACTGGAGCTGTAATCCGCAGAGATAGACATg                                                                              >  2:914490‑M2/77‑143 (MQ=255)

                                                            cataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATg                                                                              <  2:428704‑M2/67‑1 (MQ=255)

                                                                 tcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                                                                         <  1:744326‑M2/72‑1 (MQ=255)

                                                                   ctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGcc                                                                       >  2:985653‑M2/70‑143 (MQ=255)

                                                                    tgggcttgctgaagaataattgaaatgatattattaattccactgcgtttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTATAATCAGAAAAGATAGACATGCTTAGACa                                                                      >  2:1039017‑M2/69‑143 (MQ=255)

                                                                             tgaagaataattgaaatgatattattaattccactgcctttcgtagaggaaagtgctaaATAATAATCAATCGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATCGACATGCTTAGCCcatctctcct                                                             >  2:256573‑M2/60‑140 (MQ=255)

                                                                              gaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGTAACTGTAATCAGAAATGATAGACATGCTTAGCCAATCGCTAttt                                                            >  2:553355‑M2/59‑143 (MQ=255)

                                                                                agaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttga                                                          <  1:362433‑M2/87‑1 (MQ=255)

                                                                                  aataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGATATGTAACCATAAGAGATAGACATGCTCAGCCAATCTCTATttgatt                                                        >  1:834166‑M2/55‑143 (MQ=255)

                                                                                  aataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgatt                                                        >  1:635929‑M2/55‑143 (MQ=255)

                                                                                      attgaaatgatattattaattccactgtctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaat                                                    <  2:897991‑M2/93‑1 (MQ=255)

                                                                                       ttgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgcatt                                                   >  1:392458‑M2/50‑143 (MQ=255)

                                                                                       ttgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGAAACTATTCTCAGTAATTTTATACATGCTTAGCCAATCTCTATTTGattgaatt                                                   <  1:790535‑M2/94‑1 (MQ=255)

                                                                                         gaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattga                                                 <  2:793595‑M2/96‑1 (MQ=255)

                                                                                         gaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattga                                                 <  2:353445‑M2/96‑1 (MQ=255)

                                                                                          aaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTACTTGAttgaattgaa                                                <  2:888097‑M2/97‑1 (MQ=255)

                                                                                           aatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa                                               <  1:119031‑M2/98‑1 (MQ=255)

                                                                                           aatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa                                               >  2:777325‑M2/46‑143 (MQ=255)

                                                                                                 attattaattccactgcctttggtagaggaaagtgataaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTGAGCCAATCTCTATTTGATTGAATTGAAAGAtgtt                                         >  2:262091‑M2/40‑143 (MQ=255)

                                                                                                  ttattaagtcgactgtcgttagtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgttt                                        <  2:638486‑M2/105‑1 (MQ=255)

                                                                                                   tattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgtttg                                       <  1:1044444‑M2/106‑1 (MQ=255)

                                                                                                   tattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgtttg                                       <  1:442133‑M2/106‑1 (MQ=255)

                                                                                                     ttaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgtttgtt                                     <  1:985653‑M2/108‑1 (MQ=255)

                                                                                                     ttaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgtttgtt                                     <  1:913541‑M2/108‑1 (MQ=255)

                                                                                                     ttaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgtttgtt                                     >  1:820245‑M2/36‑143 (MQ=255)

                                                                                                      taattccactgcctttggtagaggaaagtgcaatATATAAAACAAAGGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCATAAAATATAGACATGCTTAACCAATCTCAATTTGAATGAATTGAAAGATGTTTGTTa                                    >  2:408503‑M2/35‑143 (MQ=255)

                                                                                                        attccactgtctttggtagaggaaactgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAg                                  <  2:829431‑M2/111‑1 (MQ=255)

                                                                                                        attccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAg                                  >  1:996662‑M2/33‑143 (MQ=255)

                                                                                                         ttccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAgg                                 >  1:614662‑M2/32‑143 (MQ=255)

                                                                                                             actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATGATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATg                             <  2:842645‑M2/116‑1 (MQ=255)

                                                                                                                 cctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGCTTGAATTGAAAGATGTTTGTTAAGGCATGGATg                         >  2:922748‑M2/24‑143 (MQ=255)

                                                                                                                   tttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCa                       >  1:334332‑M2/22‑143 (MQ=255)

                                                                                                                       gtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCt                   >  1:573087‑M2/18‑143 (MQ=255)

                                                                                                                       gtagaggaaagagctaaATAATAATCAATTGTTAAATGAGTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTACTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCt                   <  1:570894‑M2/126‑1 (MQ=255)

                                                                                                                             gaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGAt             >  1:659315‑M2/12‑143 (MQ=255)

                                                                                                                                 gtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTg         <  1:670293‑M2/136‑1 (MQ=255)

                                                                                                                                   gctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGCCCTGCTTAGCCAATCTCTACTTGAATGACTTGAAAGGTGTTTGTTACGGCGTGGAGGCCAGCTATAGCTTctgct       >  1:980442‑M2/6‑141 (MQ=255)

                                                                                                                                      aaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGCAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACg    >  1:96343‑M2/3‑143 (MQ=255)

                                                                                                                                       aATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCTAATCTCTATTTGATTGAATTGAAAGAGGTTTGTTACGGCATGGATGCAAGCTATCGATTCTGATGCgg   >  1:247533‑M2/2‑143 (MQ=255)

                                                                                                                                       aATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACgg   <  1:836658‑M2/142‑1 (MQ=255)

                                                                                                                                        ataataatCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGt  >  1:880863/1‑143 (MQ=255)

                                                                                                                                        ataataatCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGAAAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGt  <  2:566838/143‑1 (MQ=255)

                                                                                                                                        ataataatCAATTGTTAAATAGCTTTTCTTTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGt  <  1:426938/143‑1 (MQ=255)

GCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGT  >  NC_000913/1300562‑1300840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`