New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40499182 (0.040)53 (1.200) 46/280 0.0 96.4% noncoding (21/109 nt) spf Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent
?NC_000913 = 4499510 NA (NA)intergenic (+9/+84) insD1/yjgX IS2 transposase TnpB/pseudogene fragment

TCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4049775‑4049918
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTC  <  NC_000913/4499510‑4499369
                                                                                                                                                                                                                                                                                              
TCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAGAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGAT                                                                                                                                                 >  1:395832/1‑143
   TAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGA                                                                                                                                              <  1:225502/143‑1
    AAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGAT                                                                                                                                             >  1:664059/1‑143
          GCACCACAAGATGTCACGCTTTGTAATCGTCATTCGAAATTCCTATGCAACAACTTAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCC                                                                                                                                       <  1:485673/143‑1
          GCAACATAAGCTGTCACGTTTTGAGATGGCTAATAGAAACTCCAATGCAACAACAAAAAAAAAATTACAAAAAGTGGTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCC                                                                                                                                       <  2:141877/143‑1
            AACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACCGAGGTAAGATGGATTTGCCCCT                                                                                                                                     <  2:96904/143‑1
               ATAAGCTATCACGTTATGAGAGGGCAATTAAAAATTCCTATGAAAAAACAGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATA                                                                                                                                  <  2:652072/143‑1
                    cgGTCACGTTTTGCGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCC                                                                                                                             <  1:423613/141‑1
                    CTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGCAGGGTACAGAGGTAAGATGGATTTGCCCCTACATTTCC                                                                                                                             >  2:400284/1‑143
                          CGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACAT                                                                                                                       >  1:572041/1‑143
                          CGTTTCGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACAT                                                                                                                       <  2:396916/143‑1
                            ttgtggGATGGCTATTAGCAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTGAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCT                                                                                                                     <  1:676629/137‑1
                            TTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGCGTAAAGCTAGTCGCGTAGGGTACAGAGGTAAGATGGACTTGCCCCTATATTTCCAGACATCT                                                                                                                     >  2:513912/1‑143
                                 TGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAATAGTAAAGTTAGTCGCGTAGGGGAGAGAGGTAAGATGGAGTTGCACCTATAGTGCACGACAGCTGTTAT                                                                                                                >  2:10014/1‑143
                                   ATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCA                                                                                                              <  1:422724/143‑1
                                    ggggTATTAGAATGTCCTATGCAACAACAGCAAAAAAATTACAAAAAGTGCTCTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCAC                                                                                                             <  2:258566/139‑1
                                             ggaagTCCGATGCAACAAGGGAAGAAAAATGACACAAAGTGCGTTCTGAGCTGAACAAAAAAGAGTAAAGTGAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCAT                                                                                                    <  1:678807/138‑1
                                             GAAATTCATATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGATAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCGTATATTTCGAGACATCTGTGAGCACTTAACCGAT                                                                                                    >  2:103304/1‑143
                                              AAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATT                                                                                                   <  1:774590/143‑1
                                              AAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGATAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACGTCTGTTATCACTTAACCCATT                                                                                                   >  1:249018/1‑143
                                               AATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTA                                                                                                  <  2:2255/143‑1
                                               AATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTA                                                                                                  <  2:618919/143‑1
                                                ATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCGCTATGTTTCCAGACATCTGTTATCACTTAACCCATTAC                                                                                                 >  1:760860/1‑143
                                                ATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTAC                                                                                                 <  2:367108/143‑1
                                                  tgctaaggAACAAGTGAAAGAAAAATACAAAAAGTGCGTTCTGGACTGAACAAAAAAGAGTAAAGCTAGTCGCGTGGGGGACAGAGGTAAGATGGATTTGCCCCGATATTTCCAGACATCTGTTATCACTTAACCCATTACAA                                                                                               <  2:773740/135‑1
                                                  TCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAA                                                                                               <  1:680865/143‑1
                                                           ACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGC                                                                                      <  2:572041/143‑1
                                                                 GAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGA                                                                                <  1:457067/143‑1
                                                                      AAAATTACAAAAAGTGCTTTCTGAACTGGACAAAAAAGAGTAAAGTTAGTCGCGTGGGGTACAGAGGGAAGATGGATTTGCCCCTATATTCCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATAgta                                                                           >  2:470512/1‑140
                                                                        AATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTCACCCATTACAAGCCCGCTGCCGCAGATATTCCC                                                                         >  2:484285/1‑143
                                                                          TTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGT                                                                       <  2:98905/143‑1
                                                                          TTACAAAAAGTGCTGTCTGAACCGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACACATTACAAGCCCGCTGCCGCAGATATTCCCGT                                                                       <  2:407707/143‑1
                                                                                       TTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAAC                                                          >  1:430290/1‑143
                                                                                       TTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAAC                                                          >  1:498223/1‑143
                                                                                         TCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCC                                                        <  2:395832/143‑1
                                                                                          CTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTCGCGAGCGATAACCCA                                                       >  2:180267/1‑143
                                                                                             AACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCG                                                    >  1:436445/1‑143
                                                                                              ACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGC                                                   >  2:481212/1‑143
                                                                                               CTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGaa                                                  >  1:723609/1‑141
                                                                                                  AACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTA                                               >  1:119988/1‑143
                                                                                                  AACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTA                                               >  2:45637/1‑143
                                                                                                    CAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATACTTCCAGACATCTGTTATCACCTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATG                                             >  1:361535/1‑143
                                                                                                       AAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCGCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGG                                          >  2:734487/1‑143
                                                                                                        AAAGAGTATCGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGA                                         <  2:414152/143‑1
                                                                                                        AAAGAGTAAAGTTAGTCGCGTAGGGTACAGACGTAAGATGGTTTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCAGTGGCGAGCGATAACCCAGCGCACTATGCGGA                                         <  2:408728/143‑1
                                                                                                            AGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATAGTCCCGTGGCGAGCGCAAACCCTGCGCCCTCTGCGGGTGCC                                     >  1:649314/1‑143
                                                                                                             ggAAAGTTACGCGCTTAGGGTACACAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGGTATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCA                                    <  1:316984/141‑1
                                                                                                                    gcgcCGCGTAGGGTACAGAGGCAAGATGGCTTTGCCCCTAGATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTA                             <  1:635065/139‑1
                                                                                                                            TAGGGTACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATGACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTC                     <  2:319623/143‑1
                                                                                                                               GGTACCGAGGTAACATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAA                  <  2:255452/143‑1
                                                                                                                                GTACAGAGGGAAGGTGGATTTGCCCCTATATTTCCAGACATCGGTTATCACCTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAAC                 <  1:584592/143‑1
                                                                                                                                  ACAGAGGTAAGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTCCAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCGTACGTTGTAATGCTCGAACGC               >  1:652746/1‑143
                                                                                                                                   CAGAGCTAAGATGGATTTGCCCCTATAGTTCCAGACATCTGTTATCACTTACCCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCC              <  2:619545/143‑1
                                                                                                                                           AGATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAcg      >  1:637273/1‑141
                                                                                                                                              TGGGTTTGCCCCTATATTTCCAGACCTCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTT   <  2:190978/143‑1
                                                                                                                                               GGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTC  <  1:181802/143‑1
                                                                                                                                                                                                                                                                                              
TCGTAAGTAAGCAACATAAGCTGTCACGTTTTGTGATGGCTATTAGAAATTCCTATGCAACAACTGAAAAAAAATTACAAAAAGTGCTTTCTGAACTGAACAAAAAAGAGTAAAGTTAGTCGCGTAGGGTACAGAGGTAAGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4049775‑4049918
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTC  <  NC_000913/4499510‑4499369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.