| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 1 (0.020) | 39 (0.870) | 36/284 | 0.2 | 97.5% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
TCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTA > NC_000913/4001514‑4001785 | tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCACCGGCCCGCTGGTTTGACGACGACGACGGCCTGCATctccttcttcttc > 2:161688‑M1/1‑130 (MQ=255) ttGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctt > 1:725973‑M1/1‑128 (MQ=255) tGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttt < 1:206760‑M1/143‑17 (MQ=255) gtctgaccggaCGACGACGAGCGACCGCGCGTACAATCTGAACTTGTCCAGAGCCTTGCAACCAGCCCGGAACTGGAGGACATCGATGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttg < 2:404441‑M1/138‑18 (MQ=255) gTCGAACCGGACGCCGACGCGCGACTGTGAATAGTGTCCGAACTTGGCCTTTGCCGGCCAACCCGCCCGGAACTGGTAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTg < 2:718447/143‑1 (MQ=255) gTCGAACCGCACGACGACGAGCGCGTGCGCGCACCATCTAAAGCACGCCTATGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttg < 2:673568‑M1/143‑18 (MQ=255) tCGAACCGGACGACGACGAGCGCCTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttga < 1:46409‑M1/143‑19 (MQ=255) cGAAGCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa < 2:613319‑M1/143‑20 (MQ=255) cGAACCGGACGACCACGAGCGACTGCGCGTACAATCTGAACGTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa < 1:86115‑M1/143‑20 (MQ=255) gacgactacGTGCGATCGCTCGTGCGATCGGAGCTTGGCCAGAGCCTGGCAACCCGCGCGGAACTGGAAGACATAGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgg < 2:416145‑M1/143‑27 (MQ=255) acggcgaGCGACTGCGCGTACAATCTGCACTTAGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctgctttgaagatgcggaaga < 2:543622‑M1/143‑31 (MQ=255) cgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaaggt > 1:224005‑M1/1‑112 (MQ=255) gcgtgtggtcgtacattgttATCTCGGCGAGAGTCTGGTAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATttccttcttcttctttgaagatgcggaagatcacgcc < 2:623303‑M1/134‑38 (MQ=255) gCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACTATGACGGCTTGCATctatttcttattattagaagatgaagaaaaacacgcc > 1:70573‑M1/1‑106 (MQ=255) gACTGCGCGTACAATCTGACCTTGGCCGCAGGCTGGCACCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccgg < 1:486930‑M1/143‑40 (MQ=255) aCTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgccgacgctcacgccggt > 1:489136‑M1/1‑103 (MQ=255) tGCGCGGAGAATCGGGAGTTGGCCAGAGCCGGGCGACCCGCCCGGAACGGGAAGAGATCGAAGCGTCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAGctccgtcttcttctttgaagatgcggaagatcacgccggtaa < 2:9747‑M1/143‑43 (MQ=255) cgcgTACAATCTGCACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttttaagatgcggaagatcacgccggtaact < 2:234252‑M1/143‑45 (MQ=255) aCAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccact < 1:193603‑M1/143‑50 (MQ=255) aTCTGAACTTGCCCAGAGCCTGGCAACCCGCCCGGAACCGGAAGACATCGAAGCATCGGCACGTTTCTGTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg < 1:260513‑M1/143‑53 (MQ=255) tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctgcttcttctttgaagatgcggaagatcacgccggtaactccactgcgc > 1:583181‑M1/1‑90 (MQ=255) cTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcattta < 2:232867‑M1/143‑60 (MQ=255) ccAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatc > 1:650141‑M1/1‑79 (MQ=255) gCCTGGCACCCCGCCCGGAACTGGAAGGCATCGAACCATCGGCTCGTTTCTTTGAAGACGACGTCGGCCTGCACctccttcttcttctttgcagatgcggcagatcacgccggtaactccactgtggcatttaccatccgtga < 2:396293‑M1/143‑70 (MQ=255) cTGACAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTGTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactttggcatttaccatccgtgatg < 1:337580‑M1/143‑72 (MQ=255) cccgcccgGAACTGGAAGCCCTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct < 2:168040‑M1/143‑79 (MQ=255) ccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatctaccatccgtgctggcggtaga > 2:265204‑M1/1‑64 (MQ=255) aaCTGGAAGACATCGAAGCATCTGCACGTTTCTTTGAAGACAACGACGGCCTGCATccccttcctcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactct < 1:144802‑M1/143‑88 (MQ=255) cTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgc < 2:177700‑M1/143‑90 (MQ=255) tGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccaccatgctgcgcatcatccgtgatggtcgtctgtttactctgcg > 2:342079‑M1/1‑53 (MQ=255) aGACATCGATGCATCGTCACGGTGCTGTGAAGACGACGACGGCCTGCATctgcttcttcttctttgaagatgcggcagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgag < 2:344583‑M1/143‑95 (MQ=255) aaGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaact < 2:650141‑M1/143‑103 (MQ=255) tCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccg > 1:146954‑M1/1‑36 (MQ=255) cTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttcctctgcttgagcgtgaactgcccgcttttcgtctg > 1:343837‑M1/1‑25 (MQ=255) cTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctg < 2:519658‑M1/143‑119 (MQ=255) cgacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatg < 1:339333‑M1/143‑128 (MQ=255) tacgatggCCTGCATctgcttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgc < 1:94483‑M1/142‑129 (MQ=255) gacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgc > 1:716243‑M1/1‑15 (MQ=255) gacgacgGCCTGCATctccttcttcttcgtggaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgc < 1:640730‑M1/143‑129 (MQ=255) tctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttcccatccgtgagggtcgtccgtttactctgcgtgaccgtgaactgcccggttttcgtctgtaccgtaggcgtgcccgcggccag > 2:690762‑M1/1‑1 (MQ=255) | TCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTA > NC_000913/4001514‑4001785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |