| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 1 (0.020) | 39 (0.870) | 36/284 | 0.2 | 97.5% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAG > NC_000913/4001518‑4001790 | gTCGAACCGGACGCCGACGCGCGACTGTGAATAGTGTCCGAACTTGGCCTTTGCCGGCCAACCCGCCCGGAACTGGTAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTg < 2:718447/143‑1 (MQ=255) tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcaccggcccgctggtttgacgacgacgacggcctgcatCTCcttcttcttc > 2:161688‑M2/131‑143 (MQ=255) ttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttctt > 1:725973‑M2/129‑143 (MQ=255) tgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCttt < 1:206760‑M2/16‑1 (MQ=255) gtctgaccggacgacgacgagcgaccgcgcgtacaatctgaacttgtccagagccttgcaaccagcccggaactggaggacatcgatgcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTg < 2:404441‑M2/17‑1 (MQ=255) gtcgaaccgcacgacgacgagcgcgtgcgcgcaccatctaaagcacgcctatgcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTg < 2:673568‑M2/17‑1 (MQ=255) tcgaaccggacgacgacgagcgcctgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGa < 1:46409‑M2/18‑1 (MQ=255) cgaagcggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGaa < 2:613319‑M2/19‑1 (MQ=255) cgaaccggacgaccacgagcgactgcgcgtacaatctgaacgtggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGaa < 1:86115‑M2/19‑1 (MQ=255) gacgactacgtgcgatcgctcgtgcgatcggagcttggccagagcctggcaacccgcgcggaactggaagacatagaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCgg < 2:416145‑M2/26‑1 (MQ=255) acggcgagcgactgcgcgtacaatctgcacttagccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTGCTTTGAAGATGCGGAAGa < 2:543622‑M2/30‑1 (MQ=255) cgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaaggt > 1:224005‑M2/113‑141 (MQ=255) gcgtgtggtcgtacattgttatctcggcgagagtctggtaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatTTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGcc < 2:623303‑M2/37‑1 (MQ=255) gcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagactatgacggcttgcatCTATTTCTTATTATTAGAAGATGAAGAAAAACACGcc > 1:70573‑M2/107‑143 (MQ=255) gactgcgcgtacaatctgaccttggccgcaggctggcaccccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCgg < 1:486930‑M2/39‑1 (MQ=255) actgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCCGACGCTCACGCCGGt > 1:489136‑M2/104‑143 (MQ=255) tgcgcggagaatcgggagttggccagagccgggcgacccgcccggaacgggaagagatcgaagcgtcggcacgtttctttgaagacgacgacggcctgcagCTCCGTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa < 2:9747‑M2/42‑1 (MQ=255) cgcgtacaatctgcacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTTAAGATGCGGAAGATCACGCCGGTAACt < 2:234252‑M2/44‑1 (MQ=255) acaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACt < 1:193603‑M2/49‑1 (MQ=255) atctgaacttgcccagagcctggcaacccgcccggaaccggaagacatcgaagcatcggcacgtttctgtgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg < 1:260513‑M2/52‑1 (MQ=255) tctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTGCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCcactgcgc > 1:583181‑M2/91‑140 (MQ=255) cttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTa < 2:232867‑M2/59‑1 (MQ=255) ccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATc > 1:650141‑M2/80‑143 (MQ=255) gcctggcaccccgcccggaactggaaggcatcgaaccatcggctcgtttctttgaagacgacgtcggcctgcacCTCCTTCTTCTTCTTTGCAGATGCGGCAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa < 2:396293‑M2/69‑1 (MQ=255) ctgacaacccgcccggaactggaagacatcgaagcatcggcacgtttctgtgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTTTGGCATTTACCATCCGTGATg < 1:337580‑M2/71‑1 (MQ=255) cccgcccggaactggaagccctcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCt < 2:168040‑M2/78‑1 (MQ=255) ccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATCTACCATccgtgctggcggtaga > 2:265204‑M2/65‑136 (MQ=255) aactggaagacatcgaagcatctgcacgtttctttgaagacaacgacggcctgcatCCCCTTCCTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTActct < 1:144802‑M2/87‑1 (MQ=255) ctggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgc < 2:177700‑M2/89‑1 (MQ=255) tggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACCATGCTGCGCATCATCCGTGATGGTCGTCTGTTTACTCTgcg > 2:342079‑M2/54‑143 (MQ=255) agacatcgatgcatcgtcacggtgctgtgaagacgacgacggcctgcatCTGCTTCTTCTTCTTTGAAGATGCGGCAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgag < 2:344583‑M2/94‑1 (MQ=255) aagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACt < 2:650141‑M2/102‑1 (MQ=255) tcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCg > 1:146954‑M2/37‑143 (MQ=255) ctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTCCTCTGCTTGAGCGTGAACTGCCCGCTTTTCGTCTg > 1:343837‑M2/26‑143 (MQ=255) ctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTg < 2:519658‑M2/118‑1 (MQ=255) cgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATg < 1:339333‑M2/127‑1 (MQ=255) tacgatggcctgcatCTGCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGc < 1:94483‑M2/128‑1 (MQ=255) gacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGc > 1:716243‑M2/16‑143 (MQ=255) gacgacggcctgcatCTCCTTCTTCTTCGTGGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGc < 1:640730‑M2/128‑1 (MQ=255) gcatcTCCCTCTACTGCTTTGCACATGCGCATGTTCACGCCGGTAACTCCACTGTGGCATTTCCCATCCGTGATTGTCGTCTGTTCACTCTGCGTGGGCGTGATCTGCCCGCTTTTCGTCTGTATCGTATGCGTGTCCGTAGc < 1:522363/139‑1 (MQ=255) tCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTCCCATCCGTGAGGGTCGTCCGTTTACTCTGCGTGACCGTGAACTGCCCGGTTTTCGTCTGTACCGTAGGCGTGCCCGCGGCCAg > 2:690762‑M2/2‑143 (MQ=255) | GTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAG > NC_000913/4001518‑4001790 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |