| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 1 (0.020) | 55 (1.000) | 46/284 | 0.1 | 98.2% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
AGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATG > NC_000913/4001502‑4001775 | aGTGTGGATTGAGCGTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATc < 2:620684‑M1/143‑2 (MQ=255) gTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATct > 1:772645‑M1/1‑141 (MQ=255) aTGGAGTGGTCTTGGCGAACGGGACGACGACGAGCGACTGCGCGTACAATCTGAACTGGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc < 2:447447‑M1/143‑5 (MQ=255) ggtctgatcGTGTCGCATCGGACGGCGACGCGCGACTGCGCGTACAATCGGAACTTGGCCGGAGCCTGGCAACCCGCCCGGCACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctt < 1:129849‑M1/139‑7 (MQ=255) aTCTTGTCGAACCGGACGACGACGAGCGGCTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctt > 2:408648‑M1/1‑131 (MQ=255) ttGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGCAGCATCGGCACGTTTCTTTGAAGACGACGCCGGCCTGCATccccttcttcttctt > 2:792063‑M1/1‑128 (MQ=255) cgacgacggGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa < 1:400402‑M1/143‑29 (MQ=255) gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTCTGAAGACGACGACGGCCTGCATctccttcttctcctttgaagatgcggaagacc > 1:153976‑M1/1‑111 (MQ=255) gCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgcc < 1:174188‑M1/143‑38 (MQ=255) aCTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGTATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggt < 2:72341‑M1/143‑41 (MQ=255) cTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCAGCACGGAACTGGAAGACATCGAAACATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagctgcggaagatctctccggtc > 2:205523‑M1/1‑102 (MQ=255) ttcgcgtaCAATCTGAACTCCGCCAGCGCCTGGCAACCCGCCCGGAACTGGAAGCCCTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaa < 2:108681‑M1/141‑43 (MQ=255) cgcgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtcact > 1:146585‑M1/1‑99 (MQ=255) aTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg < 1:937897‑M1/143‑53 (MQ=255) aTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg < 1:743883‑M1/143‑53 (MQ=255) tGAAGTGGGCCAGAGCCTGGCAACCCGCCCGGCACTGGAGGTCGTGGTCGCAGCGGCACGTTTCTTTGAACTCGACGACGGCCTGCATctccttctgcttctttgaagatgcggaagatcacgccggtaactccactgtggca < 2:904600‑M1/143‑56 (MQ=255) aCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGAGACCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtacctccactgtggcattt < 1:936746‑M1/143‑59 (MQ=255) aCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGCCGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcattt < 2:47634‑M1/143‑59 (MQ=255) cTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcattta < 2:729728‑M1/143‑60 (MQ=255) ccAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatc > 2:863203‑M1/1‑79 (MQ=255) gCCTGGCAGCTCGCCCGGCACTGGAAGACATCGAAGCATCGTCACGTTTCTTTGAAGACGACGACGGCCTGCATgtcctgcttcttctttgaagatgcggaagatcacgccggtaaccccactgtggcatttaccatccgtga < 1:242026‑M1/143‑70 (MQ=255) ccTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCAGCGGCACGGTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgat < 1:401963‑M1/143‑71 (MQ=255) cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcctcttctttgaagatgcggaagatcacgccggtaactccactatggcatttaccatccgtgacg > 2:760183‑M1/1‑72 (MQ=255) ggCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggt > 1:791833‑M1/1‑70 (MQ=255) gCAACCCTCCCGGAACTGGAAGACATCGAAGCGTCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttctgcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtc < 1:301731‑M1/143‑75 (MQ=255) ccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagattacaatgtgatctccactgtggcatttaccatccgtgatggtcgtctg > 2:944199‑M1/1‑64 (MQ=255) ccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctg > 1:652391‑M1/1‑64 (MQ=255) ccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctg < 2:208378‑M1/143‑80 (MQ=255) cgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgt < 1:841058‑M1/143‑81 (MQ=255) gcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtt < 1:449305‑M1/143‑82 (MQ=255) cccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttc > 1:558803‑M1/1‑61 (MQ=255) tcgGAACTTGAATACATCGATGCATAGGCACGTTTCTTTGAAGACGATGACTGCTTGCAT‑‑‑‑‑CTCCTTGTTATTTTTTTAAGATGCGGAAGATCACGCCGGTAACTCTACTTTGGCATTTACTATCCGTGATGGTCGTCTGTTTa < 1:463122/142‑1 (MQ=255) ggAACGTGAAGACATCGAAGCATCGGCGCGTTTCTTTGAAGACGGCGACGGGCTGCATctccttcttcttctttgaagatgcggaagatcccgccggtaactccactgtggcatttaccatccgtggtggtcgtctttttact < 1:388988‑M1/143‑86 (MQ=255) aCTGGAAGACATCGAAGCATCGGCACGATTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctg > 1:527295‑M1/1‑55 (MQ=255) cTGGAAGACAGCGAAAAACCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgc < 2:253003‑M1/143‑90 (MQ=255) gAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtg > 2:453153‑M1/1‑51 (MQ=255) aGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgag > 2:356596‑M1/1‑49 (MQ=255) gACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagagcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagc < 2:203611‑M1/143‑96 (MQ=255) aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGTCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtg < 2:839628‑M1/143‑99 (MQ=255) tCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtcactccactgtggcatttaccatccgtgatggtcgcctgtttactctgcgtgagcgtga > 1:696004‑M1/1‑44 (MQ=255) cGACGCACCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactttggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 2:229819‑M1/143‑101 (MQ=255) cGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 2:746941‑M1/143‑101 (MQ=255) cGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 2:772645‑M1/143‑101 (MQ=255) gAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaac < 2:676378‑M1/143‑102 (MQ=255) gCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatgggcgtctgtttactctgcgtgagcgtgaactacccgctt > 1:738332‑M1/1‑33 (MQ=255) cgttacgatgaagacgaCGACGGCCTGCATctccttcgtcttctttgaagatgcggaagatcacgccggtaactcccctgtggcatttactatccgtgatggtcgtctggttactctgcgtgagcgtgaactgcccgcttttc < 2:136292‑M1/135‑114 (MQ=255) gTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccacggtggcatttaccatccgtgatggtcgtctgtttactctgcgtgggcgtggactgcccgcttttcg > 2:938486‑M1/1‑29 (MQ=255) gTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagagcacgccggtaactcccctgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcg > 2:803242‑M1/1‑29 (MQ=255) ttCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtc > 2:49394‑M1/1‑27 (MQ=255) ttCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtc > 2:47221‑M1/1‑27 (MQ=255) tCTTTGAAGGCGACGACGGCCTGCATctccttctgcttctttgatgatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct < 1:234260‑M1/143‑118 (MQ=255) gAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatc > 2:786253‑M1/1‑21 (MQ=255) gacgactGCTTGCATcgccttcttcttcggtggggatgcggaagatcaggccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactcggcgtgagcgtgaactgtccgcttttcgtctgtatcgtatgc < 1:377453‑M1/143‑129 (MQ=255) gacgacgGCCTGCGActcctgcttctcctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgc < 2:146585‑M1/143‑129 (MQ=255) gacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttactatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgc < 2:746965‑M1/143‑129 (MQ=255) acgGCCCGCAGctccctcttcttctttgaagatgcggaagatcacgccggtaactccactgtgccattcaacctccgttagggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgc < 2:854908‑M1/143‑133 (MQ=255) | AGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATG > NC_000913/4001502‑4001775 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |