New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2887322 =	47 (0.870)	3 (0.060)	3/468	NT	7.0%	intergenic (‑105/‑30)	ygcB/sokX	Cascade complex anti‑viral R‑loop helicase‑annealase Cas3/sok‑related sRNA, function unknown
	?	NC_000913	2887733 =	34 (0.650)					coding (578/735 nt)	cysH	phosphoadenosine phosphosulfate reductase, PAPS reductase, thioredoxin dependent

ATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGTACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTA  >  NC_000913/2887460‑2888001                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                              aTTCTATACCTGATAATTCTTCCCCCGGCTTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTACGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTa                                                                                                                                                                                                                                                                              <  2:413432/275‑1 (MQ=255)       taCCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTACGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATa                                                                                                                                                                                                                                                                        <  1:198521/275‑1 (MQ=255)                    ttcCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGtt                                                                                                                                                                                                                                                            >  1:420731/1‑274 (MQ=255)                                                  aTGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTa                                                                                                                                                                                                                                                                              <  1:49754/226‑1 (MQ=255)                                                        ctCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAACTATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGTTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATACTCGGCAGGACTTTTAATAAGcc                                                                                                                                                                                                                       >  1:322372/1‑274 (MQ=255)                                                                    aaaCGCCCCCATCAATTCTGCCCGAGGCGTTTAATTTGTCGTGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATTCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGc                                                                                                                                                                                                           <  1:242337/274‑1 (MQ=255)                                                                      acccccccATCATTTCTGACAGAGTCGTTTAATTTGTTCGGAAATATTTACCCTTCGTGTAACCCACATGCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGTTTCCCATTTACGGTTTGTATGTGGATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAg                                                                                                                                                                                                        <  2:373971/272‑1 (MQ=255)                                                                             cgagcagcattcctgattttaaacgtgaacgccgcgggaagaattatcaggtatagaatggcgtcgggtgcttgaggctgtctggcgttaagcattcgcgaggttccagatggacaaaagccccaggcgatatttctatcaacctgaggccagcgttcgaacccaaacaattcgaatgttagtctcttctttgcaggTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATa                                                                                                                                                                                                                           >  2:46318‑M2/198‑249 (MQ=255)                                                                                 cagcattcctgattttaaacgtgaacgccgcgggaagaattatcaggtatagaatggcgtcgggtgcttgaggctgtctggcgttaagcattcgcgaggttccagatggacaaaagccccaggcgatatttctatcaacctgaggccagcgttcgaacccaaacaattcgaatgttagtctcttctttgcaggTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGcc                                                                                                                                                                                                                       <  1:46318‑M2/56‑1 (MQ=255)                                                                                    tCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTgg                                                                                                                                                                                          >  2:252053/1‑275 (MQ=255)                                                                                                 tttAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGa                                                                                                                                                                             <  1:307281/275‑1 (MQ=255)                                                                                                        tggccGCCAATATTTACCCTTCGTTTAAACCACATTCCCTTTTTAAGCCAAAGAAACGCCTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCa                                                                                                                                                                      <  2:420730/272‑1 (MQ=255)                                                                                                                            tCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCCGGCCAGCAAAccc                                                                                                                                                  >  1:49452/1‑274 (MQ=255)                                                                                                                             cGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGCTAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAg                                                                                                                                                 >  1:131276/1‑275 (MQ=255)                                                                                                                                         aTTCCCTTTTTAAGCCCAGTAACCGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTc                                                                                                                                     <  2:59250/275‑1 (MQ=255)                                                                                                                                         aTTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGAAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAACTGGGCGCGACTGACGGATTGTTCACGGCGCAGGCCACCAAAccggcgttggcaatt                                                                                                                                      >  1:245015/1‑261 (MQ=255)                                                                                                                                                   tAAGCCAAATAAACGCGTTTCTTCCTCCGCCATGCCGGGTTCCCATTTTCTGTTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGTGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTAGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCa                                                                                                                           <  2:93447/275‑1 (MQ=255)                                                                                                                                                   tAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCCCGACTGCCGGATTGTTCCCGGCGACGGCCAGCAAACCAGGTTTGATCCTTAAGTTCTTGCa                                                                                                                           >  2:393041/1‑275 (MQ=255)                                                                                                                                                                 gcgTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATc                                                                                                             >  2:57895/1‑275 (MQ=255)                                                                                                                                                                    tttCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGt                                                                                                          >  1:380108/1‑275 (MQ=255)                                                                                                                                                                     aagcattcgcggggttccagattgacaaaagccccaggcgatatttctatcaacctgaggccagcgttctaacccaaacaattcgaatgttagtctcttctttgcagggAAGCAAGACATGTGTATATCACTGTAATTCGATAATCGGCAGCACTTTAAATACGCCACTCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCgg                                                                                                           <  1:413433‑M2/165‑1 (MQ=255)                                                                                                                                                                      tcttcttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGtt                                                                                                         <  1:252054/274‑1 (MQ=255)                                                                                                                                                                             ccGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCCCGCTGACTTGCCAGCACCGGTAAATTGGCACGACTGCCGGAGTTGTCACGGCGCAGGCCAGCCAACCAGGTTTGCGCTTTCAGTTCTTTCAGATCCCGGTTCATCGGTTCGCCTttg                                                                                                 >  2:99568/1‑275 (MQ=255)                                                                                                                                                                                 cttGCCGGGTTCCCATTTACGGGTTGTATGGGTGTCGCCCACCGATAAATATCCTTCATCCCTTAATGGGGATTATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCGGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGa                                                                                             <  2:292146/273‑1 (MQ=255)                                                                                                                                                                                 caggcgtgtttCCCATTTGCTTGTTGTATAGGTAGCGCCCACCGATAAATAGCCTTCATCCCATAATGGGTGTTATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGa                                                                                             <  2:4380/266‑1 (MQ=255)                                                                                                                                                                                                             tGGTTATCGCCCACAGATAAATATCCTTCATCCCATAATGGGGGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGTACTTTTCAATGCCTTCAAc                                                                 <  2:131275/275‑1 (MQ=255)                                                                                                                                                                                                                 tATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTttg                                                                                                 >  1:40069/1‑239 (MQ=255)                                                                                                                                                                                                                     gCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTTCCAGCACCGGTAAATTGGCCCGACTGCCGGATTGTTCAAGGCGCAGGCCAGAAAACCAGGTTTGCGCATTCAGTTTTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTAATTGTACTTTTCAATGCCTTCAACGCCCTGCt                                                         >  1:221342/1‑275 (MQ=255)                                                                                                                                                                                                                     gCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGa                                                                                             <  2:40069/239‑1 (MQ=255)                                                                                                                                                                                                                         aCCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGTACTTTTCAATGCCTTCAACGCCCTGCTCCca                                                     <  1:57895/275‑1 (MQ=255)                                                                                                                                                                                                                         aCCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGACCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGTACTTTTCAATGCCTTCAACGCCCTGCTCCca                                                     >  1:452590/1‑275 (MQ=255)                                                                                                                                                                                                                          ccGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGTACTTTTCAATGCCTTCAACGCCCTGCTCCcac                                                    >  2:282367/1‑275 (MQ=255)                                                                                                                                                                                                                                     ccTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACAGGTAAATTGGCACGACTGCCGGATGGTTCACGGAGCAGGCCAGCCAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGATAATCGGTTCGACTTTGTTGATGTCATTGTACTTTTCAATGCATTAAAGGCCATGTTCCCAAAGTTTTCCgac                                         >  1:417979/1‑273 (MQ=255)                                                                                                                                                                                                                                        tCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGTACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCTTAGc                                       >  2:76535/1‑274 (MQ=255)                                                                                                                                                                                                                                                     ggTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGTACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAg                         >  2:84091/1‑275 (MQ=255)                                                                                                                                                                                                                                                      gTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGTACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAgg                        >  1:133713/1‑275 (MQ=255)                                                                                                                                                                                                                                                         atatTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGCCTGCCGGATTGTTCACGGCGCAgg                                                                                                                                                             >  1:507598/1‑139 (MQ=255)                                                                                                                                                                                                                                                          tatTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCACGCCAGCAAACCAGGTTAGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGAATTTGTTGATGGCATTGTACTTTTCAATGCCTTAAACGCCCTGCTGCCTCAGTTTTCCGTAGCCTCCTTCCTGCCAGGCTga                    >  1:380635/1‑274 (MQ=255)                                                                                                                                                                                                                                                             ttCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAg                                                                                                                                                         <  2:507597/139‑1 (MQ=255)                                                                                                                                                                                                                                                                            tgcaggTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGTACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTa  <  1:282368‑M2/269‑1 (MQ=255)                                                                                                                                                                                                                                                                            tgcaggTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGACCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGTACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTa  <  2:452589‑M2/269‑1 (MQ=255)                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                              ATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTA‑TCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCGCATTCAGTTCTTTCAGAGCCCGGTTCATCGGTTCGACTTTGTTGATGTCATTGTACTTTTCAATGCCTTCAACGCCCTGCTCCCACAGTTTTCCGTAGCGTGCTTCCTGCCAGGCTGCGCTTTCGGTAGCACGGTA  >  NC_000913/2887460‑2888001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.